RNA–Protein interactions for RNA: ENST00000377344.6

CBWD3-203, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,813 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-203ENST00000377344 OR5M11Q96RB7 305 aa11.32□□□□□ -0.6
CBWD3-203ENST00000377344 HDHD5Q9BXW7 423 aa11.32□□□□□ -0.6
CBWD3-203ENST00000377344 OR2H1Q9GZK4 316 aa11.32□□□□□ -0.6
CBWD3-203ENST00000377344 ZNF224Q9NZL3 707 aa11.32□□□□□ -0.6
CBWD3-203ENST00000377344 METTL15A6NJ78 407 aa11.31□□□□□ -0.6
CBWD3-203ENST00000377344 ZNF878C9JN71 531 aa11.31□□□□□ -0.6
CBWD3-203ENST00000377344 ZG16O60844 167 aa11.31□□□□□ -0.6
CBWD3-203ENST00000377344 RPP14O95059 124 aaKnown RBP11.31□□□□□ -0.6
CBWD3-203ENST00000377344 MT-ND5P03915 603 aa11.31□□□□□ -0.6
CBWD3-203ENST00000377344 MMP7P09237 267 aaPredicted RBP11.31□□□□□ -0.6
CBWD3-203ENST00000377344 TACSTD2P09758 323 aa11.31□□□□□ -0.6
CBWD3-203ENST00000377344 PSMB1P20618 241 aaKnown RBP11.31□□□□□ -0.6
CBWD3-203ENST00000377344 ARR3P36575 388 aa11.31□□□□□ -0.6
CBWD3-203ENST00000377344 PSG4Q00888 419 aa11.31□□□□□ -0.6
CBWD3-203ENST00000377344 SPHARQ15513 63 aa11.31□□□□□ -0.6
CBWD3-203ENST00000377344 CDONQ4KMG0 1287 aa11.31□□□□□ -0.6
CBWD3-203ENST00000377344 PABPC1L2AQ5JQF8 200 aa11.31□□□□□ -0.6
CBWD3-203ENST00000377344 ALKBH2Q6NS38 261 aa11.31□□□□□ -0.6
CBWD3-203ENST00000377344 KLBQ86Z14 1044 aa11.31□□□□□ -0.6
CBWD3-203ENST00000377344 CCDC36Q8IYA8 594 aa11.31□□□□□ -0.6
CBWD3-203ENST00000377344 ZNF679Q8IYX0 411 aa11.31□□□□□ -0.6
CBWD3-203ENST00000377344 ALDH16A1Q8IZ83 802 aa11.31□□□□□ -0.6
CBWD3-203ENST00000377344 C17orf78Q8N4C9 275 aa11.31□□□□□ -0.6
CBWD3-203ENST00000377344 OR10S1Q8NGN2 331 aa11.31□□□□□ -0.6
CBWD3-203ENST00000377344 OR52N1Q8NH53 320 aa11.31□□□□□ -0.6
CBWD3-203ENST00000377344 LILRB4Q8NHJ6 448 aa11.31□□□□□ -0.6
CBWD3-203ENST00000377344 RNF133Q8WVZ7 376 aa11.31□□□□□ -0.6
CBWD3-203ENST00000377344 RORBQ92753 470 aa11.31□□□□□ -0.6
CBWD3-203ENST00000377344 OR8B4Q96RC9 309 aa11.31□□□□□ -0.6
CBWD3-203ENST00000377344 ATF6BQ99941 703 aa11.31□□□□□ -0.6
CBWD3-203ENST00000377344 ELOVL3Q9HB03 270 aa11.31□□□□□ -0.6
CBWD3-203ENST00000377344 SLC17A5Q9NRA2 495 aa11.31□□□□□ -0.6
CBWD3-203ENST00000377344 ACOXLQ9NUZ1 547 aa11.31□□□□□ -0.6
CBWD3-203ENST00000377344 MRM2Q9UI43 246 aaKnown RBP11.31□□□□□ -0.6
CBWD3-203ENST00000377344 LRP12Q9Y561 859 aa11.31□□□□□ -0.6
CBWD3-203ENST00000377344 C16orf97H3BN30 126 aa11.3□□□□□ -0.6
CBWD3-203ENST00000377344 AGFG2O95081 481 aa11.3□□□□□ -0.6
CBWD3-203ENST00000377344 PSMB9P28065 219 aa11.3□□□□□ -0.6
CBWD3-203ENST00000377344 HSD11B1P28845 292 aa11.3□□□□□ -0.6
CBWD3-203ENST00000377344 HTR5AP47898 357 aa11.3□□□□□ -0.6
CBWD3-203ENST00000377344 RIDAP52758 137 aaKnown RBP11.3□□□□□ -0.6
CBWD3-203ENST00000377344 HIST1H3AP68431 136 aa11.3□□□□□ -0.6
CBWD3-203ENST00000377344 GALK2Q01415 458 aa11.3□□□□□ -0.6
CBWD3-203ENST00000377344 RAB35Q15286 201 aa11.3□□□□□ -0.6
CBWD3-203ENST00000377344 CCDC92Q53HC0 331 aaPredicted RBP11.3□□□□□ -0.6
CBWD3-203ENST00000377344 ELFN2Q5R3F8 820 aa11.3□□□□□ -0.6
CBWD3-203ENST00000377344 HIST2H3PS2Q5TEC6 136 aa11.3□□□□□ -0.6
CBWD3-203ENST00000377344 XAF1Q6GPH4 301 aa11.3□□□□□ -0.6
CBWD3-203ENST00000377344 HIST2H3AQ71DI3 136 aa11.3□□□□□ -0.6
CBWD3-203ENST00000377344 VASH1Q7L8A9 365 aaPredicted RBP11.3□□□□□ -0.6
CBWD3-203ENST00000377344 KCTD20Q7Z5Y7 419 aa11.3□□□□□ -0.6
CBWD3-203ENST00000377344 DPPA2Q7Z7J5 298 aa11.3□□□□□ -0.6
CBWD3-203ENST00000377344 MDP1Q86V88 176 aa11.3□□□□□ -0.6
CBWD3-203ENST00000377344 SYS1Q8N2H4 156 aa11.3□□□□□ -0.6
CBWD3-203ENST00000377344 STEAP2Q8NFT2 490 aa11.3□□□□□ -0.6
CBWD3-203ENST00000377344 WACQ9BTA9 647 aa11.3□□□□□ -0.6
CBWD3-203ENST00000377344 C1QTNF6Q9BXI9 259 aa11.3□□□□□ -0.6
CBWD3-203ENST00000377344 ACTR6Q9GZN1 396 aa11.3□□□□□ -0.6
CBWD3-203ENST00000377344 WNT5BQ9H1J7 359 aa11.3□□□□□ -0.6
CBWD3-203ENST00000377344 NOX3Q9HBY0 568 aa11.3□□□□□ -0.6
CBWD3-203ENST00000377344 KCNJ16Q9NPI9 418 aa11.3□□□□□ -0.6
CBWD3-203ENST00000377344 OR5H1A6NKK0 313 aa11.3□□□□□ -0.6
CBWD3-203ENST00000377344 SULT1C4O75897 302 aa11.3□□□□□ -0.6
CBWD3-203ENST00000377344 INMTO95050 263 aa11.3□□□□□ -0.6
CBWD3-203ENST00000377344 HOXB1P14653 301 aaPredicted RBP11.3□□□□□ -0.6
CBWD3-203ENST00000377344 UGT2B10P36537 528 aa11.3□□□□□ -0.6
CBWD3-203ENST00000377344 PSMB10P40306 273 aa11.3□□□□□ -0.6
CBWD3-203ENST00000377344 OPRL1P41146 370 aa11.3□□□□□ -0.6
CBWD3-203ENST00000377344 GBX2P52951 348 aaPredicted RBP11.3□□□□□ -0.6
CBWD3-203ENST00000377344 ROM1Q03395 351 aa11.3□□□□□ -0.6
CBWD3-203ENST00000377344 PLP2Q04941 152 aa11.3□□□□□ -0.6
CBWD3-203ENST00000377344 CDSNQ15517 529 aa11.3□□□□□ -0.6
CBWD3-203ENST00000377344 ZNF684Q5T5D7 378 aa11.3□□□□□ -0.6
CBWD3-203ENST00000377344 LIPNQ5VXI9 398 aa11.3□□□□□ -0.6
CBWD3-203ENST00000377344 ZNF367Q7RTV3 350 aa11.3□□□□□ -0.6
CBWD3-203ENST00000377344 WDR31Q8NA23 367 aa11.3□□□□□ -0.6
CBWD3-203ENST00000377344 FCGR1BQ92637 280 aa11.3□□□□□ -0.6
CBWD3-203ENST00000377344 MUCL1Q96DR8 90 aa11.3□□□□□ -0.6
CBWD3-203ENST00000377344 LRRC46Q96FV0 321 aa11.3□□□□□ -0.6
CBWD3-203ENST00000377344 HDHD2Q9H0R4 259 aa11.3□□□□□ -0.6
CBWD3-203ENST00000377344 PNRC2Q9NPJ4 139 aaKnown RBP11.3□□□□□ -0.6
CBWD3-203ENST00000377344 BABAM2Q9NXR7 383 aa11.3□□□□□ -0.6
CBWD3-203ENST00000377344 FBXL3Q9UKT7 428 aa11.3□□□□□ -0.6
CBWD3-203ENST00000377344 GTF2A1LQ9UNN4 478 aa11.3□□□□□ -0.6
CBWD3-203ENST00000377344 LSM2Q9Y333 95 aaKnown RBP11.3□□□□□ -0.6
CBWD3-203ENST00000377344 PCNX1Q96RV3 2341 aa11.29□□□□□ -0.6
CBWD3-203ENST00000377344 ARPC4-TTLL3A0A0A6YYG9 625 aa11.29□□□□□ -0.6
CBWD3-203ENST00000377344 PNMA8CA0A1B0GUJ8 204 aa11.29□□□□□ -0.6
CBWD3-203ENST00000377344 IQCMA0A1B0GVH7 501 aa11.29□□□□□ -0.6
CBWD3-203ENST00000377344 TRIM64CA6NLI5 447 aa11.29□□□□□ -0.6
CBWD3-203ENST00000377344 APEX1P27695 318 aaKnown RBP11.29□□□□□ -0.6
CBWD3-203ENST00000377344 PRKXP51817 358 aa11.29□□□□□ -0.6
CBWD3-203ENST00000377344 GTF2A1P52655 376 aaPredicted RBP11.29□□□□□ -0.6
CBWD3-203ENST00000377344 GRB2P62993 217 aaKnown RBP11.29□□□□□ -0.6
CBWD3-203ENST00000377344 RAB39AQ14964 217 aa11.29□□□□□ -0.6
CBWD3-203ENST00000377344 TIGD6Q17RP2 521 aa11.29□□□□□ -0.6
CBWD3-203ENST00000377344 TIMM23BQ5SRD1 257 aa11.29□□□□□ -0.6
CBWD3-203ENST00000377344 UBE2UQ5VVX9 321 aa11.29□□□□□ -0.6
CBWD3-203ENST00000377344 OR1F12Q8NHA8 337 aa11.29□□□□□ -0.6
CBWD3-203ENST00000377344 SLC7A6Q92536 515 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms