RNA–Protein interactions for RNA: ENST00000377011.6

VRK3-202, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,749 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-202ENST00000377011 C15orf40Q8WUR7 153 aa11.02□□□□□ -0.65
VRK3-202ENST00000377011 SNX33Q8WV41 574 aa11.02□□□□□ -0.65
VRK3-202ENST00000377011 SMIM4Q8WVI0 70 aa11.02□□□□□ -0.65
VRK3-202ENST00000377011 DDOQ99489 341 aa11.02□□□□□ -0.65
VRK3-202ENST00000377011 EXO5Q9H790 373 aa11.02□□□□□ -0.65
VRK3-202ENST00000377011 A0A1W2PRG6 482 aa11.01□□□□□ -0.65
VRK3-202ENST00000377011 LINC00862A6NCI5 91 aa11.01□□□□□ -0.65
VRK3-202ENST00000377011 SERINC4A6NH21 518 aa11.01□□□□□ -0.65
VRK3-202ENST00000377011 H0YC42 278 aa11.01□□□□□ -0.65
VRK3-202ENST00000377011 SULT1B1O43704 296 aa11.01□□□□□ -0.65
VRK3-202ENST00000377011 SUSD5O60279 629 aa11.01□□□□□ -0.65
VRK3-202ENST00000377011 ZIC3O60481 467 aa11.01□□□□□ -0.65
VRK3-202ENST00000377011 PRAF2O60831 178 aa11.01□□□□□ -0.65
VRK3-202ENST00000377011 OR7A10O76100 309 aa11.01□□□□□ -0.65
VRK3-202ENST00000377011 CRYZL1O95825 349 aa11.01□□□□□ -0.65
VRK3-202ENST00000377011 ECDO95905 644 aaPredicted RBP11.01□□□□□ -0.65
VRK3-202ENST00000377011 B3GALT5-AS1P59052 145 aa11.01□□□□□ -0.65
VRK3-202ENST00000377011 RPS11P62280 158 aaKnown RBP eCLIP11.01□□□□□ -0.65
VRK3-202ENST00000377011 PMPCAQ10713 525 aa11.01□□□□□ -0.65
VRK3-202ENST00000377011 CD226Q15762 336 aa11.01□□□□□ -0.65
VRK3-202ENST00000377011 NDUFAF6Q330K2 333 aa11.01□□□□□ -0.65
VRK3-202ENST00000377011 TP53I3Q53FA7 332 aa11.01□□□□□ -0.65
VRK3-202ENST00000377011 ZBTB37Q5TC79 503 aa11.01□□□□□ -0.65
VRK3-202ENST00000377011 MAMDC2Q7Z304 686 aaPredicted RBP11.01□□□□□ -0.65
VRK3-202ENST00000377011 HDDC2Q7Z4H3 204 aa11.01□□□□□ -0.65
VRK3-202ENST00000377011 CCDC28AQ8IWP9 274 aa11.01□□□□□ -0.65
VRK3-202ENST00000377011 ZNF614Q8N883 585 aa11.01□□□□□ -0.65
VRK3-202ENST00000377011 OR2M3Q8NG83 312 aa11.01□□□□□ -0.65
VRK3-202ENST00000377011 DUSP19Q8WTR2 217 aa11.01□□□□□ -0.65
VRK3-202ENST00000377011 OR51J1Q9H342 316 aa11.01□□□□□ -0.65
VRK3-202ENST00000377011 NUDT15Q9NV35 164 aa11.01□□□□□ -0.65
VRK3-202ENST00000377011 ELF5Q9UKW6 265 aaPredicted RBP11.01□□□□□ -0.65
VRK3-202ENST00000377011 MOKQ9UQ07 419 aa11.01□□□□□ -0.65
VRK3-202ENST00000377011 RPH3AQ9Y2J0 694 aaPredicted RBP11.01□□□□□ -0.65
VRK3-202ENST00000377011 IER3IP1Q9Y5U9 82 aa11.01□□□□□ -0.65
VRK3-202ENST00000377011 POLQO75417 2590 aa11.01□□□□□ -0.65
VRK3-202ENST00000377011 HEATR5AQ86XA9 2040 aa11.01□□□□□ -0.65
VRK3-202ENST00000377011 TRBV2A0A0J9YWF9 115 aa11.01□□□□□ -0.65
VRK3-202ENST00000377011 E9PLN8 166 aa11.01□□□□□ -0.65
VRK3-202ENST00000377011 SHOXO15266 292 aa11.01□□□□□ -0.65
VRK3-202ENST00000377011 FABP7O15540 132 aa11.01□□□□□ -0.65
VRK3-202ENST00000377011 AKR7A2O43488 359 aa11.01□□□□□ -0.65
VRK3-202ENST00000377011 NDUFB5O43674 189 aa11.01□□□□□ -0.65
VRK3-202ENST00000377011 GLCEO94923 617 aa11.01□□□□□ -0.65
VRK3-202ENST00000377011 GLI4P10075 376 aa11.01□□□□□ -0.65
VRK3-202ENST00000377011 PNMTP11086 282 aa11.01□□□□□ -0.65
VRK3-202ENST00000377011 EDNRAP25101 427 aa11.01□□□□□ -0.65
VRK3-202ENST00000377011 MNDAP41218 407 aa11.01□□□□□ -0.65
VRK3-202ENST00000377011 AP3S2P59780 193 aa11.01□□□□□ -0.65
VRK3-202ENST00000377011 SNTA1Q13424 505 aa11.01□□□□□ -0.65
VRK3-202ENST00000377011 KLF9Q13886 244 aaPredicted RBP11.01□□□□□ -0.65
VRK3-202ENST00000377011 BCL2L15Q5TBC7 163 aa11.01□□□□□ -0.65
VRK3-202ENST00000377011 SIGIRRQ6IA17 410 aa11.01□□□□□ -0.65
VRK3-202ENST00000377011 LYPD4Q6UWN0 246 aa11.01□□□□□ -0.65
VRK3-202ENST00000377011 RPTNQ6XPR3 784 aa11.01□□□□□ -0.65
VRK3-202ENST00000377011 KRT74Q7RTS7 529 aa11.01□□□□□ -0.65
VRK3-202ENST00000377011 FADS6Q8N9I5 356 aa11.01□□□□□ -0.65
VRK3-202ENST00000377011 NAXEQ8NCW5 288 aa11.01□□□□□ -0.65
VRK3-202ENST00000377011 NPEPL1Q8NDH3 523 aa11.01□□□□□ -0.65
VRK3-202ENST00000377011 FAM71CQ8NEG0 241 aa11.01□□□□□ -0.65
VRK3-202ENST00000377011 SDR9C7Q8NEX9 313 aa11.01□□□□□ -0.65
VRK3-202ENST00000377011 OR5H6Q8NGV6 325 aa11.01□□□□□ -0.65
VRK3-202ENST00000377011 OR4K13Q8NH42 304 aa11.01□□□□□ -0.65
VRK3-202ENST00000377011 OR56B4Q8NH76 319 aa11.01□□□□□ -0.65
VRK3-202ENST00000377011 ZNF431Q8TF32 576 aaPredicted RBP11.01□□□□□ -0.65
VRK3-202ENST00000377011 ZMYND19Q96E35 227 aaPredicted RBP11.01□□□□□ -0.65
VRK3-202ENST00000377011 MNTQ99583 582 aa11.01□□□□□ -0.65
VRK3-202ENST00000377011 VKORC1Q9BQB6 163 aa11.01□□□□□ -0.65
VRK3-202ENST00000377011 BRD7Q9NPI1 651 aa11.01□□□□□ -0.65
VRK3-202ENST00000377011 EXOSC3Q9NQT5 275 aaKnown RBP11.01□□□□□ -0.65
VRK3-202ENST00000377011 HRNRQ86YZ3 2850 aaPredicted RBP11□□□□□ -0.65
VRK3-202ENST00000377011 INTS1Q8N201 2190 aaKnown RBP11□□□□□ -0.65
VRK3-202ENST00000377011 TEX13CA0A0J9YWL9 993 aa11□□□□□ -0.65
VRK3-202ENST00000377011 NKX2-6A6NCS4 301 aa11□□□□□ -0.65
VRK3-202ENST00000377011 HSPB2A8KAH6 182 aa11□□□□□ -0.65
VRK3-202ENST00000377011 MCIDASD6RGH6 385 aa11□□□□□ -0.65
VRK3-202ENST00000377011 AIPO00170 330 aa11□□□□□ -0.65
VRK3-202ENST00000377011 ADAM11O75078 769 aa11□□□□□ -0.65
VRK3-202ENST00000377011 CSTAP01040 98 aa11□□□□□ -0.65
VRK3-202ENST00000377011 GYPBP06028 91 aa11□□□□□ -0.65
VRK3-202ENST00000377011 SPI1P17947 270 aa11□□□□□ -0.65
VRK3-202ENST00000377011 MAPK3P27361 379 aaPredicted RBP11□□□□□ -0.65
VRK3-202ENST00000377011 GFRA1P56159 465 aa11□□□□□ -0.65
VRK3-202ENST00000377011 PER3P56645 1201 aa11□□□□□ -0.65
VRK3-202ENST00000377011 CLDN15P56746 228 aa11□□□□□ -0.65
VRK3-202ENST00000377011 SCAND1P57086 179 aa11□□□□□ -0.65
VRK3-202ENST00000377011 FCN2Q15485 313 aa11□□□□□ -0.65
VRK3-202ENST00000377011 HSPB2Q16082 182 aa11□□□□□ -0.65
VRK3-202ENST00000377011 ELFN2Q5R3F8 820 aa11□□□□□ -0.65
VRK3-202ENST00000377011 FAM205BPQ63HN1 556 aa11□□□□□ -0.65
VRK3-202ENST00000377011 ARSKQ6UWY0 536 aa11□□□□□ -0.65
VRK3-202ENST00000377011 ZNF527Q8NB42 609 aa11□□□□□ -0.65
VRK3-202ENST00000377011 SUN5Q8TC36 379 aa11□□□□□ -0.65
VRK3-202ENST00000377011 HSD17B8Q92506 261 aa11□□□□□ -0.65
VRK3-202ENST00000377011 WDYHV1Q96HA8 205 aa11□□□□□ -0.65
VRK3-202ENST00000377011 DOCK7Q96N67 2140 aa11□□□□□ -0.65
VRK3-202ENST00000377011 CACNG6Q9BXT2 260 aa11□□□□□ -0.65
VRK3-202ENST00000377011 C12orf10Q9HB07 376 aa11□□□□□ -0.65
VRK3-202ENST00000377011 ZNF281Q9Y2X9 895 aa11□□□□□ -0.65
VRK3-202ENST00000377011 AUP1Q9Y679 476 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms