RNA–Protein interactions for RNA: ENST00000376659.9

TRIM39-202, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM39, Length 3,535 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-202ENST00000376659 ALX4Q9H161 411 aaPredicted RBP8.54□□□□□ -1.04
TRIM39-202ENST00000376659 SLC2A8Q9NY64 477 aa8.54□□□□□ -1.04
TRIM39-202ENST00000376659 WNT16Q9UBV4 365 aa8.54□□□□□ -1.04
TRIM39-202ENST00000376659 OPN4Q9UHM6 478 aa8.54□□□□□ -1.04
TRIM39-202ENST00000376659 LHFPL6Q9Y693 200 aa8.54□□□□□ -1.04
TRIM39-202ENST00000376659 LOC102723996A0A087X1L8 192 aa8.54□□□□□ -1.04
TRIM39-202ENST00000376659 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa8.54□□□□□ -1.04
TRIM39-202ENST00000376659 E9PLN8 166 aa8.54□□□□□ -1.04
TRIM39-202ENST00000376659 TRAF3IP2O43734 574 aaPredicted RBP8.54□□□□□ -1.04
TRIM39-202ENST00000376659 TTRP02766 147 aa8.54□□□□□ -1.04
TRIM39-202ENST00000376659 KLK2P20151 261 aa8.54□□□□□ -1.04
TRIM39-202ENST00000376659 EIF2B1Q14232 305 aaKnown RBP8.54□□□□□ -1.04
TRIM39-202ENST00000376659 DEGS2Q6QHC5 323 aa8.54□□□□□ -1.04
TRIM39-202ENST00000376659 ARMC10Q8N2F6 343 aa8.54□□□□□ -1.04
TRIM39-202ENST00000376659 OR4D6Q8NGJ1 314 aa8.54□□□□□ -1.04
TRIM39-202ENST00000376659 LRRC20Q8TCA0 184 aa8.54□□□□□ -1.04
TRIM39-202ENST00000376659 ELP5Q8TE02 316 aa8.54□□□□□ -1.04
TRIM39-202ENST00000376659 SAP25Q8TEE9 199 aa8.54□□□□□ -1.04
TRIM39-202ENST00000376659 CHST11Q9NPF2 352 aa8.54□□□□□ -1.04
TRIM39-202ENST00000376659 CHCHD2Q9Y6H1 151 aaPredicted RBP8.54□□□□□ -1.04
TRIM39-202ENST00000376659 CACNA1EQ15878 2313 aa8.54□□□□□ -1.04
TRIM39-202ENST00000376659 ASPMQ8IZT6 3477 aa8.54□□□□□ -1.04
TRIM39-202ENST00000376659 A0A0A6YYD4 124 aa8.54□□□□□ -1.04
TRIM39-202ENST00000376659 ADAM8P78325 824 aa8.54□□□□□ -1.04
TRIM39-202ENST00000376659 FOXK1P85037 733 aa8.54□□□□□ -1.04
TRIM39-202ENST00000376659 CFAP77Q6ZQR2 320 aa8.54□□□□□ -1.04
TRIM39-202ENST00000376659 PLPP7Q8NBV4 271 aa8.54□□□□□ -1.04
TRIM39-202ENST00000376659 OR13C8Q8NGS7 320 aa8.54□□□□□ -1.04
TRIM39-202ENST00000376659 NUDT16L1Q9BRJ7 211 aaKnown RBP8.54□□□□□ -1.04
TRIM39-202ENST00000376659 TBL1XR1Q9BZK7 514 aa8.54□□□□□ -1.04
TRIM39-202ENST00000376659 COMMD4Q9H0A8 199 aa8.54□□□□□ -1.04
TRIM39-202ENST00000376659 AKAP7Q9P0M2 348 aaPredicted RBP8.54□□□□□ -1.04
TRIM39-202ENST00000376659 MRPS7Q9Y2R9 242 aaKnown RBP8.54□□□□□ -1.04
TRIM39-202ENST00000376659 LOC107986453A0A1B0GWG9 222 aa8.53□□□□□ -1.04
TRIM39-202ENST00000376659 SHISA8B8ZZ34 492 aa8.53□□□□□ -1.04
TRIM39-202ENST00000376659 SULT1C2O00338 296 aa8.53□□□□□ -1.04
TRIM39-202ENST00000376659 BCAT2O15382 392 aaPredicted RBP8.53□□□□□ -1.04
TRIM39-202ENST00000376659 HPGDP15428 266 aa8.53□□□□□ -1.04
TRIM39-202ENST00000376659 RAB6AP20340 208 aa8.53□□□□□ -1.04
TRIM39-202ENST00000376659 ACHEP22303 614 aa8.53□□□□□ -1.04
TRIM39-202ENST00000376659 EPHA8P29322 1005 aaPredicted RBP8.53□□□□□ -1.04
TRIM39-202ENST00000376659 AP3S2P59780 193 aa8.53□□□□□ -1.04
TRIM39-202ENST00000376659 CCDC85BQ15834 202 aaPredicted RBP8.53□□□□□ -1.04
TRIM39-202ENST00000376659 ESCO2Q56NI9 601 aa8.53□□□□□ -1.04
TRIM39-202ENST00000376659 TOR2AQ5JU69 321 aa8.53□□□□□ -1.04
TRIM39-202ENST00000376659 GALNT16Q8N428 558 aa8.53□□□□□ -1.04
TRIM39-202ENST00000376659 WDSUB1Q8N9V3 476 aa8.53□□□□□ -1.04
TRIM39-202ENST00000376659 TMEM229BQ8NBD8 167 aa8.53□□□□□ -1.04
TRIM39-202ENST00000376659 METTL21AQ8WXB1 218 aa8.53□□□□□ -1.04
TRIM39-202ENST00000376659 THRSPQ92748 146 aa8.53□□□□□ -1.04
TRIM39-202ENST00000376659 POTEKPQ9BYX7 375 aa8.53□□□□□ -1.04
TRIM39-202ENST00000376659 CHST6Q9GZX3 395 aa8.53□□□□□ -1.04
TRIM39-202ENST00000376659 COPS7AQ9UBW8 275 aa8.53□□□□□ -1.04
TRIM39-202ENST00000376659 LOC102725191A0A1B0GVB3 256 aa8.53□□□□□ -1.04
TRIM39-202ENST00000376659 YKT6O15498 198 aa8.53□□□□□ -1.04
TRIM39-202ENST00000376659 CYC1P08574 325 aa8.53□□□□□ -1.04
TRIM39-202ENST00000376659 CD63P08962 238 aa8.53□□□□□ -1.04
TRIM39-202ENST00000376659 CSF1P09603 554 aa8.53□□□□□ -1.04
TRIM39-202ENST00000376659 AP2S1P53680 142 aaPredicted RBP8.53□□□□□ -1.04
TRIM39-202ENST00000376659 RBMS2Q15434 407 aaKnown RBP8.53□□□□□ -1.04
TRIM39-202ENST00000376659 ZNF260Q3ZCT1 412 aa8.53□□□□□ -1.04
TRIM39-202ENST00000376659 GUSBP11Q6P575 273 aa8.53□□□□□ -1.04
TRIM39-202ENST00000376659 SHISA6Q6ZSJ9 500 aa8.53□□□□□ -1.04
TRIM39-202ENST00000376659 C10orf53Q8N6V4 93 aa8.53□□□□□ -1.04
TRIM39-202ENST00000376659 OR2M3Q8NG83 312 aa8.53□□□□□ -1.04
TRIM39-202ENST00000376659 C15orf40Q8WUR7 153 aa8.53□□□□□ -1.04
TRIM39-202ENST00000376659 ALKBH4Q9NXW9 302 aa8.53□□□□□ -1.04
TRIM39-202ENST00000376659 ZNF222Q9UK12 451 aa8.53□□□□□ -1.04
TRIM39-202ENST00000376659 BSNQ9UPA5 3926 aa8.53□□□□□ -1.04
TRIM39-202ENST00000376659 CPED1A4D0V7 1026 aa8.53□□□□□ -1.04
TRIM39-202ENST00000376659 C2orf72A6NCS6 295 aa8.53□□□□□ -1.04
TRIM39-202ENST00000376659 MSTNO14793 375 aa8.53□□□□□ -1.04
TRIM39-202ENST00000376659 ACSM4P0C7M7 580 aa8.53□□□□□ -1.04
TRIM39-202ENST00000376659 BTF3P20290 206 aaKnown RBP8.53□□□□□ -1.04
TRIM39-202ENST00000376659 CCKBRP32239 447 aa8.53□□□□□ -1.04
TRIM39-202ENST00000376659 H3F3AP84243 136 aa8.53□□□□□ -1.04
TRIM39-202ENST00000376659 HSF1Q00613 529 aa8.53□□□□□ -1.04
TRIM39-202ENST00000376659 PCOLCEQ15113 449 aa8.53□□□□□ -1.04
TRIM39-202ENST00000376659 MPPED2Q15777 294 aa8.53□□□□□ -1.04
TRIM39-202ENST00000376659 RAB11BQ15907 218 aa8.53□□□□□ -1.04
TRIM39-202ENST00000376659 SLC25A47Q6Q0C1 308 aa8.53□□□□□ -1.04
TRIM39-202ENST00000376659 H1FNTQ75WM6 255 aaPredicted RBP8.53□□□□□ -1.04
TRIM39-202ENST00000376659 MUC20Q8N307 709 aaPredicted RBP8.53□□□□□ -1.04
TRIM39-202ENST00000376659 ZNF676Q8N7Q3 588 aa8.53□□□□□ -1.04
TRIM39-202ENST00000376659 OR10Z1Q8NGY1 313 aa8.53□□□□□ -1.04
TRIM39-202ENST00000376659 BEX1Q9HBH7 125 aa8.53□□□□□ -1.04
TRIM39-202ENST00000376659 SUSD2Q9UGT4 822 aa8.53□□□□□ -1.04
TRIM39-202ENST00000376659 ING4Q9UNL4 249 aa8.53□□□□□ -1.04
TRIM39-202ENST00000376659 SRPK3Q9UPE1 567 aa8.53□□□□□ -1.04
TRIM39-202ENST00000376659 ANXA2P2A6NMY6 339 aa8.52□□□□□ -1.05
TRIM39-202ENST00000376659 SSX5O60225 188 aa8.52□□□□□ -1.05
TRIM39-202ENST00000376659 CD3DP04234 171 aa8.52□□□□□ -1.05
TRIM39-202ENST00000376659 HIST1H2ABP04908 130 aa8.52□□□□□ -1.05
TRIM39-202ENST00000376659 ANXA2P07355 339 aaKnown RBP8.52□□□□□ -1.05
TRIM39-202ENST00000376659 CRABP1P29762 137 aa8.52□□□□□ -1.05
TRIM39-202ENST00000376659 CLDN6P56747 220 aa8.52□□□□□ -1.05
TRIM39-202ENST00000376659 HIST1H3AP68431 136 aa8.52□□□□□ -1.05
TRIM39-202ENST00000376659 C17orf67Q0P5P2 114 aa8.52□□□□□ -1.05
TRIM39-202ENST00000376659 ODF4Q2M2E3 257 aa8.52□□□□□ -1.05
TRIM39-202ENST00000376659 PHF19Q5T6S3 580 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms