RNA–Protein interactions for RNA: ENST00000375290.6

PTCH1-204, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 10,631 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-204ENST00000375290 C7orf66A4D0T2 115 aa9.31□□□□□ -0.92
PTCH1-204ENST00000375290 CLN5O75503 358 aa9.31□□□□□ -0.92
PTCH1-204ENST00000375290 GLSO94925 669 aaPredicted RBP9.31□□□□□ -0.92
PTCH1-204ENST00000375290 C1SP09871 688 aa9.31□□□□□ -0.92
PTCH1-204ENST00000375290 NME2P22392 152 aa9.31□□□□□ -0.92
PTCH1-204ENST00000375290 SEMG2Q02383 582 aa9.31□□□□□ -0.92
PTCH1-204ENST00000375290 CDONQ4KMG0 1287 aa9.31□□□□□ -0.92
PTCH1-204ENST00000375290 TMEM65Q6PI78 240 aa9.31□□□□□ -0.92
PTCH1-204ENST00000375290 TP53INP2Q8IXH6 220 aa9.31□□□□□ -0.92
PTCH1-204ENST00000375290 FCGR2AP12318 317 aa9.31□□□□□ -0.92
PTCH1-204ENST00000375290 RHOUQ7L0Q8 258 aa9.31□□□□□ -0.92
PTCH1-204ENST00000375290 OR51F2Q8NH61 342 aa9.31□□□□□ -0.92
PTCH1-204ENST00000375290 EDARADDQ8WWZ3 215 aa9.31□□□□□ -0.92
PTCH1-204ENST00000375290 MANBALQ9NQG1 85 aa9.31□□□□□ -0.92
PTCH1-204ENST00000375290 K7ERQ8 282 aa9.31□□□□□ -0.92
PTCH1-204ENST00000375290 SEMG1P04279 462 aa9.31□□□□□ -0.92
PTCH1-204ENST00000375290 ARRB2P32121 409 aa9.31□□□□□ -0.92
PTCH1-204ENST00000375290 GLIPR1L1Q6UWM5 242 aa9.31□□□□□ -0.92
PTCH1-204ENST00000375290 Q8IYB0 196 aa9.31□□□□□ -0.92
PTCH1-204ENST00000375290 OR5M9Q8NGP3 310 aa9.31□□□□□ -0.92
PTCH1-204ENST00000375290 H3BQ06 376 aaPredicted RBP9.31□□□□□ -0.92
PTCH1-204ENST00000375290 TCN2P20062 427 aa9.31□□□□□ -0.92
PTCH1-204ENST00000375290 DGCR2P98153 550 aa9.31□□□□□ -0.92
PTCH1-204ENST00000375290 PAQR9Q6ZVX9 377 aa9.31□□□□□ -0.92
PTCH1-204ENST00000375290 HSD11B1LQ7Z5J1 315 aa9.31□□□□□ -0.92
PTCH1-204ENST00000375290 ST6GAL2Q96JF0 529 aa9.31□□□□□ -0.92
PTCH1-204ENST00000375290 SMIM7Q9BQ49 75 aa9.31□□□□□ -0.92
PTCH1-204ENST00000375290 SLC35D1Q9NTN3 355 aa9.31□□□□□ -0.92
PTCH1-204ENST00000375290 FZD6O60353 706 aa9.31□□□□□ -0.92
PTCH1-204ENST00000375290 EIF4EP06730 217 aaKnown RBP9.31□□□□□ -0.92
PTCH1-204ENST00000375290 OR8U8P0C7N1 319 aa9.31□□□□□ -0.92
PTCH1-204ENST00000375290 HLXQ14774 488 aaPredicted RBP9.31□□□□□ -0.92
PTCH1-204ENST00000375290 FAM69BQ5VUD6 431 aa9.31□□□□□ -0.92
PTCH1-204ENST00000375290 C8orf82Q6P1X6 216 aaPredicted RBP9.31□□□□□ -0.92
PTCH1-204ENST00000375290 ZNF574Q6ZN55 896 aaPredicted RBP9.31□□□□□ -0.92
PTCH1-204ENST00000375290 ANGPTL5Q86XS5 388 aa9.31□□□□□ -0.92
PTCH1-204ENST00000375290 LMNTD1Q8N9Z9 388 aa9.31□□□□□ -0.92
PTCH1-204ENST00000375290 OR8D4Q8NGM9 314 aa9.31□□□□□ -0.92
PTCH1-204ENST00000375290 SEMA6CQ9H3T2 930 aa9.31□□□□□ -0.92
PTCH1-204ENST00000375290 GAB2Q9UQC2 676 aa9.31□□□□□ -0.92
PTCH1-204ENST00000375290 FLVCR1Q9Y5Y0 555 aa9.31□□□□□ -0.92
PTCH1-204ENST00000375290 CDK5RAP2Q96SN8 1893 aa9.31□□□□□ -0.92
PTCH1-204ENST00000375290 MRPS21P82921 87 aaKnown RBP9.31□□□□□ -0.92
PTCH1-204ENST00000375290 BPIFCQ8NFQ6 507 aa9.31□□□□□ -0.92
PTCH1-204ENST00000375290 SEC22AQ96IW7 307 aa9.31□□□□□ -0.92
PTCH1-204ENST00000375290 TXNIPQ9H3M7 391 aa9.31□□□□□ -0.92
PTCH1-204ENST00000375290 OR7C1O76099 320 aaPredicted RBP9.31□□□□□ -0.92
PTCH1-204ENST00000375290 FBP1P09467 338 aa9.31□□□□□ -0.92
PTCH1-204ENST00000375290 ZNF865P0CJ78 1059 aaPredicted RBP9.31□□□□□ -0.92
PTCH1-204ENST00000375290 FCGR2CP31995 323 aa9.31□□□□□ -0.92
PTCH1-204ENST00000375290 EXT1Q16394 746 aa9.31□□□□□ -0.92
PTCH1-204ENST00000375290 LINC01465Q8N7H1 131 aa9.31□□□□□ -0.92
PTCH1-204ENST00000375290 C19orf47Q8N9M1 422 aaKnown RBP9.31□□□□□ -0.92
PTCH1-204ENST00000375290 SPSB1Q96BD6 273 aa9.31□□□□□ -0.92
PTCH1-204ENST00000375290 HHIPL1Q96JK4 782 aa9.31□□□□□ -0.92
PTCH1-204ENST00000375290 PDE4DIPQ5VU43 2346 aa9.31□□□□□ -0.92
PTCH1-204ENST00000375290 DCTN6O00399 190 aa9.3□□□□□ -0.92
PTCH1-204ENST00000375290 CLDN1O95832 211 aa9.3□□□□□ -0.92
PTCH1-204ENST00000375290 LIMK1P53667 647 aa9.3□□□□□ -0.92
PTCH1-204ENST00000375290 PKIAP61925 76 aa9.3□□□□□ -0.92
PTCH1-204ENST00000375290 RAB6CQ53S08 254 aa9.3□□□□□ -0.92
PTCH1-204ENST00000375290 MRM1Q6IN84 353 aaKnown RBP9.3□□□□□ -0.92
PTCH1-204ENST00000375290 GRASPQ7Z6J2 395 aaPredicted RBP9.3□□□□□ -0.92
PTCH1-204ENST00000375290 PIK3IP1Q96FE7 263 aa9.3□□□□□ -0.92
PTCH1-204ENST00000375290 SMIM3Q9BZL3 60 aa9.3□□□□□ -0.92
PTCH1-204ENST00000375290 TGIF2Q9GZN2 237 aa9.3□□□□□ -0.92
PTCH1-204ENST00000375290 RAB6CQ9H0N0 254 aa9.3□□□□□ -0.92
PTCH1-204ENST00000375290 HS3ST3A1Q9Y663 406 aa9.3□□□□□ -0.92
PTCH1-204ENST00000375290 LEUTXA8MZ59 168 aa9.3□□□□□ -0.92
PTCH1-204ENST00000375290 GUK1Q16774 197 aa9.3□□□□□ -0.92
PTCH1-204ENST00000375290 OGFOD3Q6PK18 319 aa9.3□□□□□ -0.92
PTCH1-204ENST00000375290 MCATQ8IVS2 390 aaKnown RBP9.3□□□□□ -0.92
PTCH1-204ENST00000375290 TMED6Q8WW62 240 aa9.3□□□□□ -0.92
PTCH1-204ENST00000375290 ASB1Q9Y576 335 aa9.3□□□□□ -0.92
PTCH1-204ENST00000375290 SULT1A3P0DMM9 295 aa9.3□□□□□ -0.92
PTCH1-204ENST00000375290 SULT1A4P0DMN0 295 aa9.3□□□□□ -0.92
PTCH1-204ENST00000375290 RACK1P63244 317 aaKnown RBP9.3□□□□□ -0.92
PTCH1-204ENST00000375290 TMEM207Q6UWW9 146 aa9.3□□□□□ -0.92
PTCH1-204ENST00000375290 Q6ZPB1 254 aaPredicted RBP9.3□□□□□ -0.92
PTCH1-204ENST00000375290 Q8N9G6 341 aaPredicted RBP9.3□□□□□ -0.92
PTCH1-204ENST00000375290 RPUSD4Q96CM3 377 aaKnown RBP9.3□□□□□ -0.92
PTCH1-204ENST00000375290 CTSCP53634 463 aa9.3□□□□□ -0.92
PTCH1-204ENST00000375290 PARS2Q7L3T8 475 aaKnown RBP9.3□□□□□ -0.92
PTCH1-204ENST00000375290 PTP4A1Q93096 173 aa9.3□□□□□ -0.92
PTCH1-204ENST00000375290 CMBLQ96DG6 245 aa9.3□□□□□ -0.92
PTCH1-204ENST00000375290 PLSCR5A0PG75 271 aa9.3□□□□□ -0.92
PTCH1-204ENST00000375290 TMEM235A6NFC5 223 aa9.3□□□□□ -0.92
PTCH1-204ENST00000375290 MFNGO00587 321 aa9.3□□□□□ -0.92
PTCH1-204ENST00000375290 SEMA4FO95754 770 aa9.3□□□□□ -0.92
PTCH1-204ENST00000375290 EPHA1P21709 976 aa9.3□□□□□ -0.92
PTCH1-204ENST00000375290 PPP1CBP62140 327 aa9.3□□□□□ -0.92
PTCH1-204ENST00000375290 MORN1Q5T089 497 aa9.3□□□□□ -0.92
PTCH1-204ENST00000375290 TMEM71Q6P5X7 295 aa9.3□□□□□ -0.92
PTCH1-204ENST00000375290 HLA-CQ95604 372 aa9.3□□□□□ -0.92
PTCH1-204ENST00000375290 NXPE3Q969Y0 559 aa9.3□□□□□ -0.92
PTCH1-204ENST00000375290 LRRC3BQ96PB8 259 aa9.3□□□□□ -0.92
PTCH1-204ENST00000375290 LOC107986453A0A1B0GWG9 222 aa9.3□□□□□ -0.92
PTCH1-204ENST00000375290 G3V3Q6 166 aa9.3□□□□□ -0.92
PTCH1-204ENST00000375290 ELNP15502 786 aa9.3□□□□□ -0.92
PTCH1-204ENST00000375290 CSNK1G2P78368 415 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms