RNA–Protein interactions for RNA: ENST00000374685.8

RXRB-202, Transcript of retinoid X receptor beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RXRB, Length 2,846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-202ENST00000374685 CACNG6Q9BXT2 260 aa16.33■□□□□ 0.21
RXRB-202ENST00000374685 REG4Q9BYZ8 158 aa16.33■□□□□ 0.21
RXRB-202ENST00000374685 PCDHB16Q9NRJ7 776 aa16.33■□□□□ 0.21
RXRB-202ENST00000374685 KIF25Q9UIL4 384 aa16.33■□□□□ 0.21
RXRB-202ENST00000374685 DCDC2BA2VCK2 349 aa16.33■□□□□ 0.2
RXRB-202ENST00000374685 KHDRBS3O75525 346 aaKnown RBP16.33■□□□□ 0.2
RXRB-202ENST00000374685 CCL3P10147 92 aa16.33■□□□□ 0.2
RXRB-202ENST00000374685 HOXA6P31267 233 aa16.33■□□□□ 0.2
RXRB-202ENST00000374685 BTCP35070 178 aa16.33■□□□□ 0.2
RXRB-202ENST00000374685 PITPNAQ00169 270 aa16.33■□□□□ 0.2
RXRB-202ENST00000374685 RASGEF1BQ0VAM2 473 aa16.33■□□□□ 0.2
RXRB-202ENST00000374685 SNTB2Q13425 540 aaKnown RBP16.33■□□□□ 0.2
RXRB-202ENST00000374685 IL11RAQ14626 422 aa16.33■□□□□ 0.2
RXRB-202ENST00000374685 OVCH2Q7RTZ1 564 aa16.33■□□□□ 0.2
RXRB-202ENST00000374685 HIST2H2ABQ8IUE6 130 aaPredicted RBP16.33■□□□□ 0.2
RXRB-202ENST00000374685 TMEM105Q8N8V8 129 aa16.33■□□□□ 0.2
RXRB-202ENST00000374685 HS3ST3B1Q9Y662 390 aa16.33■□□□□ 0.2
RXRB-202ENST00000374685 DAP3P51398 398 aaKnown RBP16.32■□□□□ 0.2
RXRB-202ENST00000374685 EFNB2P52799 333 aa16.32■□□□□ 0.2
RXRB-202ENST00000374685 POLR2GP62487 172 aaKnown RBP eCLIP16.32■□□□□ 0.2
RXRB-202ENST00000374685 MFAP5Q13361 173 aa16.32■□□□□ 0.2
RXRB-202ENST00000374685 DMRTC1Q5HYR2 192 aa16.32■□□□□ 0.2
RXRB-202ENST00000374685 S100A16Q96FQ6 103 aaKnown RBP16.32■□□□□ 0.2
RXRB-202ENST00000374685 MED28Q9H204 178 aa16.32■□□□□ 0.2
RXRB-202ENST00000374685 CGGBP1Q9UFW8 167 aaPredicted RBP16.32■□□□□ 0.2
RXRB-202ENST00000374685 DHDHQ9UQ10 334 aa16.32■□□□□ 0.2
RXRB-202ENST00000374685 CAMK2AQ9UQM7 478 aa16.32■□□□□ 0.2
RXRB-202ENST00000374685 EXPH5Q8NEV8 1989 aa16.32■□□□□ 0.2
RXRB-202ENST00000374685 KLF7O75840 302 aaPredicted RBP16.32■□□□□ 0.2
RXRB-202ENST00000374685 SPOCK1Q08629 439 aa16.32■□□□□ 0.2
RXRB-202ENST00000374685 SIGLEC14Q08ET2 396 aa16.32■□□□□ 0.2
RXRB-202ENST00000374685 RAET1LQ5VY80 246 aa16.32■□□□□ 0.2
RXRB-202ENST00000374685 FAM198BQ6UWH4 519 aa16.32■□□□□ 0.2
RXRB-202ENST00000374685 LRRTM1Q86UE6 522 aa16.32■□□□□ 0.2
RXRB-202ENST00000374685 OR2M3Q8NG83 312 aa16.32■□□□□ 0.2
RXRB-202ENST00000374685 OR10H5Q8NGA6 315 aa16.32■□□□□ 0.2
RXRB-202ENST00000374685 OR52N5Q8NH56 324 aa16.32■□□□□ 0.2
RXRB-202ENST00000374685 ADAMTS14Q8WXS8 1223 aa16.32■□□□□ 0.2
RXRB-202ENST00000374685 FANCFQ9NPI8 374 aa16.32■□□□□ 0.2
RXRB-202ENST00000374685 CDV3Q9UKY7 258 aaKnown RBP16.32■□□□□ 0.2
RXRB-202ENST00000374685 FLVCR2Q9UPI3 526 aa16.32■□□□□ 0.2
RXRB-202ENST00000374685 A0A0A6YYJ9 748 aa16.32■□□□□ 0.2
RXRB-202ENST00000374685 SLC2A1P11166 492 aa16.32■□□□□ 0.2
RXRB-202ENST00000374685 CLRN1P58418 232 aa16.32■□□□□ 0.2
RXRB-202ENST00000374685 FLI1Q01543 452 aaPredicted RBP16.32■□□□□ 0.2
RXRB-202ENST00000374685 GFOD2Q3B7J2 385 aa16.32■□□□□ 0.2
RXRB-202ENST00000374685 LGALSLQ3ZCW2 172 aaPredicted RBP16.32■□□□□ 0.2
RXRB-202ENST00000374685 SLC26A10Q8NG04 563 aa16.32■□□□□ 0.2
RXRB-202ENST00000374685 RPS4Y2Q8TD47 263 aa16.32■□□□□ 0.2
RXRB-202ENST00000374685 TAS2R4Q9NYW5 299 aa16.32■□□□□ 0.2
RXRB-202ENST00000374685 MAB21L2Q9Y586 359 aa16.32■□□□□ 0.2
RXRB-202ENST00000374685 TRBV5-5A0A0J9YX44 114 aa16.31■□□□□ 0.2
RXRB-202ENST00000374685 TMEM269A0A1B0GVZ9 245 aa16.31■□□□□ 0.2
RXRB-202ENST00000374685 MFSD2BA6NFX1 497 aa16.31■□□□□ 0.2
RXRB-202ENST00000374685 P2RY10O00398 339 aa16.31■□□□□ 0.2
RXRB-202ENST00000374685 MMP15P51511 669 aa16.31■□□□□ 0.2
RXRB-202ENST00000374685 ART1P52961 327 aa16.31■□□□□ 0.2
RXRB-202ENST00000374685 SCRN3Q0VDG4 424 aa16.31■□□□□ 0.2
RXRB-202ENST00000374685 C3orf33Q6P1S2 294 aa16.31■□□□□ 0.2
RXRB-202ENST00000374685 MAMSTRQ6ZN01 415 aa16.31■□□□□ 0.2
RXRB-202ENST00000374685 UEVLDQ8IX04 471 aa16.31■□□□□ 0.2
RXRB-202ENST00000374685 DND1Q8IYX4 353 aaKnown RBP16.31■□□□□ 0.2
RXRB-202ENST00000374685 OR51A2Q8NGJ7 313 aa16.31■□□□□ 0.2
RXRB-202ENST00000374685 RNF128Q8TEB7 428 aa16.31■□□□□ 0.2
RXRB-202ENST00000374685 ST8SIA2Q92186 375 aa16.31■□□□□ 0.2
RXRB-202ENST00000374685 DPAGT1Q9H3H5 408 aa16.31■□□□□ 0.2
RXRB-202ENST00000374685 PTGES2Q9H7Z7 377 aa16.31■□□□□ 0.2
RXRB-202ENST00000374685 CHCHD2Q9Y6H1 151 aaPredicted RBP16.31■□□□□ 0.2
RXRB-202ENST00000374685 IGHV1-45A0A0A0MS14 117 aa16.31■□□□□ 0.2
RXRB-202ENST00000374685 PHYHO14832 338 aa16.31■□□□□ 0.2
RXRB-202ENST00000374685 GMDSO60547 372 aa16.31■□□□□ 0.2
RXRB-202ENST00000374685 TCRBP04435 133 aa16.31■□□□□ 0.2
RXRB-202ENST00000374685 CD1AP06126 327 aa16.31■□□□□ 0.2
RXRB-202ENST00000374685 ITGA5P08648 1049 aa16.31■□□□□ 0.2
RXRB-202ENST00000374685 DUSP3P51452 185 aaPredicted RBP16.31■□□□□ 0.2
RXRB-202ENST00000374685 PLA1AQ53H76 456 aa16.31■□□□□ 0.2
RXRB-202ENST00000374685 TMEM255AQ5JRV8 349 aa16.31■□□□□ 0.2
RXRB-202ENST00000374685 ZNF468Q5VIY5 522 aaPredicted RBP16.31■□□□□ 0.2
RXRB-202ENST00000374685 C11orf40Q8WZ69 217 aa16.31■□□□□ 0.2
RXRB-202ENST00000374685 RADILQ96JH8 1075 aa16.31■□□□□ 0.2
RXRB-202ENST00000374685 MRGPRX4Q96LA9 322 aa16.31■□□□□ 0.2
RXRB-202ENST00000374685 KCNK17Q96T54 332 aa16.31■□□□□ 0.2
RXRB-202ENST00000374685 ZCCHC4Q9H5U6 513 aa16.31■□□□□ 0.2
RXRB-202ENST00000374685 B3GAT1Q9P2W7 334 aa16.31■□□□□ 0.2
RXRB-202ENST00000374685 PPIEQ9UNP9 301 aaKnown RBP16.31■□□□□ 0.2
RXRB-202ENST00000374685 NSG1A0A0A6YYJ2 146 aa16.3■□□□□ 0.2
RXRB-202ENST00000374685 KRBOX1C9JBD0 128 aa16.3■□□□□ 0.2
RXRB-202ENST00000374685 GPR171O14626 319 aa16.3■□□□□ 0.2
RXRB-202ENST00000374685 KDM4BO94953 1096 aa16.3■□□□□ 0.2
RXRB-202ENST00000374685 H2BFMP0C1H6 154 aa16.3■□□□□ 0.2
RXRB-202ENST00000374685 COX6A1P12074 109 aa16.3■□□□□ 0.2
RXRB-202ENST00000374685 ANXA3P12429 323 aa16.3■□□□□ 0.2
RXRB-202ENST00000374685 PRKXP51817 358 aa16.3■□□□□ 0.2
RXRB-202ENST00000374685 B3GNTL1Q67FW5 361 aaPredicted RBP16.3■□□□□ 0.2
RXRB-202ENST00000374685 LUZP2Q86TE4 346 aa16.3■□□□□ 0.2
RXRB-202ENST00000374685 ZNF227Q86WZ6 799 aa16.3■□□□□ 0.2
RXRB-202ENST00000374685 COMMD2Q86X83 199 aa16.3■□□□□ 0.2
RXRB-202ENST00000374685 ELP5Q8TE02 316 aa16.3■□□□□ 0.2
RXRB-202ENST00000374685 ASB17Q8WXJ9 295 aa16.3■□□□□ 0.2
RXRB-202ENST00000374685 PHYHIPQ92561 330 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms