RNA–Protein interactions for RNA: ENST00000374199.8

PRPF4-202, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRPF4, Length 3,212 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-202ENST00000374199 ZNF544Q6NX49 715 aa11.11□□□□□ -0.63
PRPF4-202ENST00000374199 SPATC1Q76KD6 591 aa11.11□□□□□ -0.63
PRPF4-202ENST00000374199 ZNF627Q7L945 461 aa11.11□□□□□ -0.63
PRPF4-202ENST00000374199 ZNF676Q8N7Q3 588 aa11.11□□□□□ -0.63
PRPF4-202ENST00000374199 RFT1Q96AA3 541 aa11.11□□□□□ -0.63
PRPF4-202ENST00000374199 ZNF385AQ96PM9 386 aaKnown RBP11.11□□□□□ -0.63
PRPF4-202ENST00000374199 SIGLEC12Q96PQ1 595 aa11.11□□□□□ -0.63
PRPF4-202ENST00000374199 UCN2Q96RP3 112 aa11.11□□□□□ -0.63
PRPF4-202ENST00000374199 NELFAQ9H3P2 528 aa11.11□□□□□ -0.63
PRPF4-202ENST00000374199 BRD7Q9NPI1 651 aa11.11□□□□□ -0.63
PRPF4-202ENST00000374199 NME2P1O60361 137 aa11.11□□□□□ -0.63
PRPF4-202ENST00000374199 ALX3O95076 343 aa11.11□□□□□ -0.63
PRPF4-202ENST00000374199 TNFSF15O95150 251 aa11.11□□□□□ -0.63
PRPF4-202ENST00000374199 ITGA5P08648 1049 aa11.11□□□□□ -0.63
PRPF4-202ENST00000374199 QDPRP09417 244 aa11.11□□□□□ -0.63
PRPF4-202ENST00000374199 NME2P22392 152 aa11.11□□□□□ -0.63
PRPF4-202ENST00000374199 TALDO1P37837 337 aa11.11□□□□□ -0.63
PRPF4-202ENST00000374199 QRFPP83859 136 aa11.11□□□□□ -0.63
PRPF4-202ENST00000374199 CAMK2DQ13557 499 aa11.11□□□□□ -0.63
PRPF4-202ENST00000374199 BCL2A1Q16548 175 aa11.11□□□□□ -0.63
PRPF4-202ENST00000374199 TMEM244Q5VVB8 128 aa11.11□□□□□ -0.63
PRPF4-202ENST00000374199 RAET1LQ5VY80 246 aa11.11□□□□□ -0.63
PRPF4-202ENST00000374199 IGFL2Q6UWQ7 119 aa11.11□□□□□ -0.63
PRPF4-202ENST00000374199 ZNF813Q6ZN06 617 aa11.11□□□□□ -0.63
PRPF4-202ENST00000374199 PPP1R14AQ96A00 147 aa11.11□□□□□ -0.63
PRPF4-202ENST00000374199 CREB3L1Q96BA8 519 aa11.11□□□□□ -0.63
PRPF4-202ENST00000374199 SLITRK2Q9H156 845 aa11.11□□□□□ -0.63
PRPF4-202ENST00000374199 TCF7L1Q9HCS4 588 aa11.11□□□□□ -0.63
PRPF4-202ENST00000374199 TNFSF11O14788 317 aa11.1□□□□□ -0.63
PRPF4-202ENST00000374199 ACSM4P0C7M7 580 aa11.1□□□□□ -0.63
PRPF4-202ENST00000374199 GABRA1P14867 456 aa11.1□□□□□ -0.63
PRPF4-202ENST00000374199 NBL1P41271 181 aa11.1□□□□□ -0.63
PRPF4-202ENST00000374199 BTG1P62324 171 aa11.1□□□□□ -0.63
PRPF4-202ENST00000374199 MRPS34P82930 218 aaKnown RBP11.1□□□□□ -0.63
PRPF4-202ENST00000374199 OTPQ5XKR4 325 aa11.1□□□□□ -0.63
PRPF4-202ENST00000374199 ANKRD16Q6P6B7 361 aa11.1□□□□□ -0.63
PRPF4-202ENST00000374199 PRSS33Q8NF86 280 aa11.1□□□□□ -0.63
PRPF4-202ENST00000374199 OR6F1Q8NGZ6 308 aa11.1□□□□□ -0.63
PRPF4-202ENST00000374199 UPRTQ96BW1 309 aa11.1□□□□□ -0.63
PRPF4-202ENST00000374199 UTP23Q9BRU9 249 aaKnown RBP11.1□□□□□ -0.63
PRPF4-202ENST00000374199 TRAF4Q9BUZ4 470 aaPredicted RBP11.1□□□□□ -0.63
PRPF4-202ENST00000374199 RNF121Q9H920 327 aa11.1□□□□□ -0.63
PRPF4-202ENST00000374199 HHLA2Q9UM44 414 aa11.1□□□□□ -0.63
PRPF4-202ENST00000374199 EMC9Q9Y3B6 208 aa11.1□□□□□ -0.63
PRPF4-202ENST00000374199 MECP2P51608 486 aaKnown RBP11.1□□□□□ -0.63
PRPF4-202ENST00000374199 RAG2P55895 527 aa11.1□□□□□ -0.63
PRPF4-202ENST00000374199 CLDN18P56856 261 aa11.1□□□□□ -0.63
PRPF4-202ENST00000374199 GPR176Q14439 515 aa11.1□□□□□ -0.63
PRPF4-202ENST00000374199 KRT74Q7RTS7 529 aa11.1□□□□□ -0.63
PRPF4-202ENST00000374199 LINC00346Q8IVM7 164 aa11.1□□□□□ -0.63
PRPF4-202ENST00000374199 NUDT16L1Q9BRJ7 211 aaKnown RBP11.1□□□□□ -0.63
PRPF4-202ENST00000374199 IL17BQ9UHF5 180 aa11.1□□□□□ -0.63
PRPF4-202ENST00000374199 LOC107986453A0A1B0GWG9 222 aa11.09□□□□□ -0.63
PRPF4-202ENST00000374199 FAM25AB3EWG3 89 aa11.09□□□□□ -0.63
PRPF4-202ENST00000374199 FAM25CB3EWG5 89 aa11.09□□□□□ -0.63
PRPF4-202ENST00000374199 FAM25GB3EWG6 89 aa11.09□□□□□ -0.63
PRPF4-202ENST00000374199 ZNF708P17019 499 aa11.09□□□□□ -0.63
PRPF4-202ENST00000374199 HOXD11P31277 338 aaPredicted RBP11.09□□□□□ -0.63
PRPF4-202ENST00000374199 FAM27BQ5VT28 67 aa11.09□□□□□ -0.63
PRPF4-202ENST00000374199 OLFML2AQ68BL7 652 aa11.09□□□□□ -0.63
PRPF4-202ENST00000374199 CRIP3Q6Q6R5 217 aa11.09□□□□□ -0.63
PRPF4-202ENST00000374199 SEZ6L2Q6UXD5 910 aa11.09□□□□□ -0.63
PRPF4-202ENST00000374199 LINGO2Q7L985 606 aa11.09□□□□□ -0.63
PRPF4-202ENST00000374199 CDH24Q86UP0 819 aa11.09□□□□□ -0.63
PRPF4-202ENST00000374199 NKAIN3Q8N8D7 197 aa11.09□□□□□ -0.63
PRPF4-202ENST00000374199 OR2V1Q8NHB1 315 aa11.09□□□□□ -0.63
PRPF4-202ENST00000374199 C15orf40Q8WUR7 153 aa11.09□□□□□ -0.63
PRPF4-202ENST00000374199 PBOV1Q9GZY1 135 aa11.09□□□□□ -0.63
PRPF4-202ENST00000374199 STMN3Q9NZ72 180 aa11.09□□□□□ -0.63
PRPF4-202ENST00000374199 BOKQ9UMX3 212 aaPredicted RBP11.09□□□□□ -0.63
PRPF4-202ENST00000374199 H0YC42 278 aa11.09□□□□□ -0.63
PRPF4-202ENST00000374199 GABARAPH6UMI1 98 aa11.09□□□□□ -0.63
PRPF4-202ENST00000374199 XRCC3O43542 346 aa11.09□□□□□ -0.63
PRPF4-202ENST00000374199 CRYGSP22914 178 aa11.09□□□□□ -0.63
PRPF4-202ENST00000374199 ANOS1P23352 680 aa11.09□□□□□ -0.63
PRPF4-202ENST00000374199 CLDN17P56750 224 aa11.09□□□□□ -0.63
PRPF4-202ENST00000374199 GRB2P62993 217 aaKnown RBP11.09□□□□□ -0.63
PRPF4-202ENST00000374199 GABREP78334 506 aa11.09□□□□□ -0.63
PRPF4-202ENST00000374199 CCDC92Q53HC0 331 aaPredicted RBP11.09□□□□□ -0.63
PRPF4-202ENST00000374199 TRIQKQ629K1 86 aa11.09□□□□□ -0.63
PRPF4-202ENST00000374199 LRFN1Q9P244 771 aa11.09□□□□□ -0.63
PRPF4-202ENST00000374199 SPENQ96T58 3664 aaKnown RBP11.09□□□□□ -0.63
PRPF4-202ENST00000374199 TMEM269A0A1B0GVZ9 245 aa11.09□□□□□ -0.63
PRPF4-202ENST00000374199 MEIOCA2RUB1 952 aa11.09□□□□□ -0.63
PRPF4-202ENST00000374199 PRKAR1AP10644 381 aa11.09□□□□□ -0.63
PRPF4-202ENST00000374199 MSR1P21757 451 aa11.09□□□□□ -0.63
PRPF4-202ENST00000374199 HES5Q5TA89 166 aa11.09□□□□□ -0.63
PRPF4-202ENST00000374199 MZT2BQ6NZ67 158 aa11.09□□□□□ -0.63
PRPF4-202ENST00000374199 GPR137CQ8N3F9 429 aa11.09□□□□□ -0.63
PRPF4-202ENST00000374199 LINC00470Q9BZP3 86 aa11.09□□□□□ -0.63
PRPF4-202ENST00000374199 DHDHQ9UQ10 334 aa11.09□□□□□ -0.63
PRPF4-202ENST00000374199 ZFHX4Q86UP3 3567 aa11.08□□□□□ -0.64
PRPF4-202ENST00000374199 A0A0U1RQV5 110 aa11.08□□□□□ -0.64
PRPF4-202ENST00000374199 MEGF11A6BM72 1044 aa11.08□□□□□ -0.64
PRPF4-202ENST00000374199 G3V3Y1 287 aa11.08□□□□□ -0.64
PRPF4-202ENST00000374199 RPL36A-HNRNPH2H7BZ11 118 aa11.08□□□□□ -0.64
PRPF4-202ENST00000374199 TLX3O43711 291 aaPredicted RBP11.08□□□□□ -0.64
PRPF4-202ENST00000374199 FTH1P19P0C7X4 201 aa11.08□□□□□ -0.64
PRPF4-202ENST00000374199 ENPP1P22413 925 aa11.08□□□□□ -0.64
PRPF4-202ENST00000374199 CBX3Q13185 183 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms