RNA–Protein interactions for RNA: ENST00000373720.3

SNRNP40-202, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 1 (best) BASIC

Gene SNRNP40, Length 1,087 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-202ENST00000373720 LOXL2Q9Y4K0 774 aa7.77□□□□□ -1.17
SNRNP40-202ENST00000373720 XIRP2A4UGR9 3374 aa7.76□□□□□ -1.17
SNRNP40-202ENST00000373720 A0A1B0GUH1 482 aa7.76□□□□□ -1.17
SNRNP40-202ENST00000373720 FAM171A2A8MVW0 826 aa7.76□□□□□ -1.17
SNRNP40-202ENST00000373720 NPIPA2E9PIF3 369 aa7.76□□□□□ -1.17
SNRNP40-202ENST00000373720 NPIPA3F8WFD2 350 aa7.76□□□□□ -1.17
SNRNP40-202ENST00000373720 TFECO14948 347 aaPredicted RBP7.76□□□□□ -1.17
SNRNP40-202ENST00000373720 ZNF354AO60765 605 aaPredicted RBP7.76□□□□□ -1.17
SNRNP40-202ENST00000373720 PAHP00439 452 aa7.76□□□□□ -1.17
SNRNP40-202ENST00000373720 PLGP00747 810 aaPredicted RBP7.76□□□□□ -1.17
SNRNP40-202ENST00000373720 H2AFB2P0C5Z0 115 aa7.76□□□□□ -1.17
SNRNP40-202ENST00000373720 ZNF806P0C7X5 589 aa7.76□□□□□ -1.17
SNRNP40-202ENST00000373720 MYF5P13349 255 aa7.76□□□□□ -1.17
SNRNP40-202ENST00000373720 RAB3AP20336 220 aa7.76□□□□□ -1.17
SNRNP40-202ENST00000373720 CNR1P21554 472 aa7.76□□□□□ -1.17
SNRNP40-202ENST00000373720 MSR1P21757 451 aa7.76□□□□□ -1.17
SNRNP40-202ENST00000373720 MPZP25189 248 aa7.76□□□□□ -1.17
SNRNP40-202ENST00000373720 BDKRB2P30411 391 aa7.76□□□□□ -1.17
SNRNP40-202ENST00000373720 GDNFP39905 211 aa7.76□□□□□ -1.17
SNRNP40-202ENST00000373720 ALDH3B1P43353 468 aa7.76□□□□□ -1.17
SNRNP40-202ENST00000373720 CSNK1A1P48729 337 aa7.76□□□□□ -1.17
SNRNP40-202ENST00000373720 PTH2RP49190 550 aa7.76□□□□□ -1.17
SNRNP40-202ENST00000373720 TAS2R20P59543 309 aa7.76□□□□□ -1.17
SNRNP40-202ENST00000373720 HIST1H3AP68431 136 aa7.76□□□□□ -1.17
SNRNP40-202ENST00000373720 MRPS15P82914 257 aaKnown RBP7.76□□□□□ -1.17
SNRNP40-202ENST00000373720 MRPS34P82930 218 aaKnown RBP7.76□□□□□ -1.17
SNRNP40-202ENST00000373720 MEF2DQ14814 521 aa7.76□□□□□ -1.17
SNRNP40-202ENST00000373720 PPA1Q15181 289 aa7.76□□□□□ -1.17
SNRNP40-202ENST00000373720 RBMS2Q15434 407 aaKnown RBP7.76□□□□□ -1.17
SNRNP40-202ENST00000373720 TAF13Q15543 124 aa7.76□□□□□ -1.17
SNRNP40-202ENST00000373720 TMEM176BQ3YBM2 270 aaPredicted RBP7.76□□□□□ -1.17
SNRNP40-202ENST00000373720 ATAD3CQ5T2N8 411 aa7.76□□□□□ -1.17
SNRNP40-202ENST00000373720 HIST2H3PS2Q5TEC6 136 aa7.76□□□□□ -1.17
SNRNP40-202ENST00000373720 ZNF529Q6P280 563 aa7.76□□□□□ -1.17
SNRNP40-202ENST00000373720 LRFN4Q6PJG9 635 aa7.76□□□□□ -1.17
SNRNP40-202ENST00000373720 IL20RBQ6UXL0 311 aa7.76□□□□□ -1.17
SNRNP40-202ENST00000373720 ZNF782Q6ZMW2 699 aaPredicted RBP7.76□□□□□ -1.17
SNRNP40-202ENST00000373720 HIST2H3AQ71DI3 136 aa7.76□□□□□ -1.17
SNRNP40-202ENST00000373720 ADGRE4PQ86SQ3 457 aa7.76□□□□□ -1.17
SNRNP40-202ENST00000373720 GLRX5Q86SX6 157 aa7.76□□□□□ -1.17
SNRNP40-202ENST00000373720 OR13C3Q8NGS6 347 aa7.76□□□□□ -1.17
SNRNP40-202ENST00000373720 UBASH3BQ8TF42 649 aa7.76□□□□□ -1.17
SNRNP40-202ENST00000373720 THAP3Q8WTV1 239 aaPredicted RBP7.76□□□□□ -1.17
SNRNP40-202ENST00000373720 CCDC107Q8WV48 283 aa7.76□□□□□ -1.17
SNRNP40-202ENST00000373720 TMEM54Q969K7 222 aa7.76□□□□□ -1.17
SNRNP40-202ENST00000373720 CPNE4Q96A23 557 aaPredicted RBP7.76□□□□□ -1.17
SNRNP40-202ENST00000373720 ZNF524Q96C55 264 aa7.76□□□□□ -1.17
SNRNP40-202ENST00000373720 FER1L6-AS2Q96M78 137 aa7.76□□□□□ -1.17
SNRNP40-202ENST00000373720 GHITMQ9H3K2 345 aa7.76□□□□□ -1.17
SNRNP40-202ENST00000373720 RGCCQ9H4X1 137 aa7.76□□□□□ -1.17
SNRNP40-202ENST00000373720 CDCP1Q9H5V8 836 aa7.76□□□□□ -1.17
SNRNP40-202ENST00000373720 METTL17Q9H7H0 456 aaPredicted RBP7.76□□□□□ -1.17
SNRNP40-202ENST00000373720 GP6Q9HCN6 339 aa7.76□□□□□ -1.17
SNRNP40-202ENST00000373720 G6PC2Q9NQR9 355 aa7.76□□□□□ -1.17
SNRNP40-202ENST00000373720 PCDHB16Q9NRJ7 776 aa7.76□□□□□ -1.17
SNRNP40-202ENST00000373720 PARPBPQ9NWS1 579 aa7.76□□□□□ -1.17
SNRNP40-202ENST00000373720 FAM206AQ9NX38 181 aa7.76□□□□□ -1.17
SNRNP40-202ENST00000373720 SLC5A6Q9Y289 635 aa7.76□□□□□ -1.17
SNRNP40-202ENST00000373720 MRPS7Q9Y2R9 242 aaKnown RBP7.76□□□□□ -1.17
SNRNP40-202ENST00000373720 KLHDC2Q9Y2U9 406 aa7.76□□□□□ -1.17
SNRNP40-202ENST00000373720 N6AMT1Q9Y5N5 214 aa7.76□□□□□ -1.17
SNRNP40-202ENST00000373720 FLVCR1Q9Y5Y0 555 aa7.76□□□□□ -1.17
SNRNP40-202ENST00000373720 EXPH5Q8NEV8 1989 aa7.76□□□□□ -1.17
SNRNP40-202ENST00000373720 CABIN1Q9Y6J0 2220 aa7.75□□□□□ -1.17
SNRNP40-202ENST00000373720 SPTBP11277 2137 aa7.75□□□□□ -1.17
SNRNP40-202ENST00000373720 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.75□□□□□ -1.17
SNRNP40-202ENST00000373720 PRSS44E7EML9 344 aa7.75□□□□□ -1.17
SNRNP40-202ENST00000373720 H3BML4 177 aa7.75□□□□□ -1.17
SNRNP40-202ENST00000373720 H7C1C5 153 aa7.75□□□□□ -1.17
SNRNP40-202ENST00000373720 TPD52L2O43399 206 aaKnown RBP7.75□□□□□ -1.17
SNRNP40-202ENST00000373720 SYT7O43581 403 aa7.75□□□□□ -1.17
SNRNP40-202ENST00000373720 ZIC3O60481 467 aa7.75□□□□□ -1.17
SNRNP40-202ENST00000373720 CA11O75493 328 aa7.75□□□□□ -1.17
SNRNP40-202ENST00000373720 RGS11O94810 467 aa7.75□□□□□ -1.17
SNRNP40-202ENST00000373720 LPLP06858 475 aa7.75□□□□□ -1.17
SNRNP40-202ENST00000373720 AKAIN1P0CW23 69 aa7.75□□□□□ -1.17
SNRNP40-202ENST00000373720 NAT2P11245 290 aa7.75□□□□□ -1.17
SNRNP40-202ENST00000373720 ANXA3P12429 323 aa7.75□□□□□ -1.17
SNRNP40-202ENST00000373720 CCL4P13236 92 aa7.75□□□□□ -1.17
SNRNP40-202ENST00000373720 ZNF24P17028 368 aa7.75□□□□□ -1.17
SNRNP40-202ENST00000373720 ADRA2CP18825 462 aa7.75□□□□□ -1.17
SNRNP40-202ENST00000373720 TCN2P20062 427 aa7.75□□□□□ -1.17
SNRNP40-202ENST00000373720 CSRP1P21291 193 aaKnown RBP7.75□□□□□ -1.17
SNRNP40-202ENST00000373720 ENPP1P22413 925 aa7.75□□□□□ -1.17
SNRNP40-202ENST00000373720 CD96P40200 585 aa7.75□□□□□ -1.17
SNRNP40-202ENST00000373720 CBX5P45973 191 aa7.75□□□□□ -1.17
SNRNP40-202ENST00000373720 GZMKP49863 264 aa7.75□□□□□ -1.17
SNRNP40-202ENST00000373720 SOX8P57073 446 aa7.75□□□□□ -1.17
SNRNP40-202ENST00000373720 TAS2R19P59542 299 aa7.75□□□□□ -1.17
SNRNP40-202ENST00000373720 LCN6P62502 163 aa7.75□□□□□ -1.17
SNRNP40-202ENST00000373720 FAPQ12884 760 aa7.75□□□□□ -1.17
SNRNP40-202ENST00000373720 AIMP2Q13155 320 aaKnown RBP7.75□□□□□ -1.17
SNRNP40-202ENST00000373720 COL9A2Q14055 689 aaPredicted RBP7.75□□□□□ -1.17
SNRNP40-202ENST00000373720 C2orf76Q3KRA6 126 aa7.75□□□□□ -1.17
SNRNP40-202ENST00000373720 HES5Q5TA89 166 aa7.75□□□□□ -1.17
SNRNP40-202ENST00000373720 FAM27BQ5VT28 67 aa7.75□□□□□ -1.17
SNRNP40-202ENST00000373720 LYPD4Q6UWN0 246 aa7.75□□□□□ -1.17
SNRNP40-202ENST00000373720 NCCRP1Q6ZVX7 275 aaPredicted RBP7.75□□□□□ -1.17
SNRNP40-202ENST00000373720 CREB3L2Q70SY1 520 aa7.75□□□□□ -1.17
SNRNP40-202ENST00000373720 ZNF767PQ75MW2 155 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms