RNA–Protein interactions for RNA: ENST00000372003.5

TSPAN1-201, Transcript of tetraspanin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN1, Length 1,615 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-201ENST00000372003 POTEKPQ9BYX7 375 aa10.29□□□□□ -0.76
TSPAN1-201ENST00000372003 CNTNAP3Q9BZ76 1288 aa10.29□□□□□ -0.76
TSPAN1-201ENST00000372003 SLC26A1Q9H2B4 701 aa10.29□□□□□ -0.76
TSPAN1-201ENST00000372003 ADAP2Q9NPF8 381 aa10.29□□□□□ -0.76
TSPAN1-201ENST00000372003 CEP295Q9C0D2 2601 aa10.29□□□□□ -0.76
TSPAN1-201ENST00000372003 SDK2Q58EX2 2172 aa10.29□□□□□ -0.76
TSPAN1-201ENST00000372003 IGLV3-12A0A075B6K2 115 aa10.29□□□□□ -0.76
TSPAN1-201ENST00000372003 A0A087WUJ7 227 aa10.29□□□□□ -0.76
TSPAN1-201ENST00000372003 A0A1B0GTI1 187 aa10.29□□□□□ -0.76
TSPAN1-201ENST00000372003 KANTRA0A1W2PQU2 76 aa10.29□□□□□ -0.76
TSPAN1-201ENST00000372003 TCRBV16S1A1N1A0A5B0 115 aa10.29□□□□□ -0.76
TSPAN1-201ENST00000372003 TMEM8BA6NDV4 472 aa10.29□□□□□ -0.76
TSPAN1-201ENST00000372003 POM121CA8CG34 1229 aa10.29□□□□□ -0.76
TSPAN1-201ENST00000372003 MCIDASD6RGH6 385 aa10.29□□□□□ -0.76
TSPAN1-201ENST00000372003 H7C2Y5 167 aa10.29□□□□□ -0.76
TSPAN1-201ENST00000372003 MAGEB4O15481 346 aaPredicted RBP10.29□□□□□ -0.76
TSPAN1-201ENST00000372003 NKX2-8O15522 239 aa10.29□□□□□ -0.76
TSPAN1-201ENST00000372003 BCL2L11O43521 198 aa10.29□□□□□ -0.76
TSPAN1-201ENST00000372003 CDC40O60508 579 aaKnown RBP eCLIP10.29□□□□□ -0.76
TSPAN1-201ENST00000372003 UPK3AO75631 287 aa10.29□□□□□ -0.76
TSPAN1-201ENST00000372003 GPR75O95800 540 aa10.29□□□□□ -0.76
TSPAN1-201ENST00000372003 RLN2P04090 185 aa10.29□□□□□ -0.76
TSPAN1-201ENST00000372003 CD63P08962 238 aa10.29□□□□□ -0.76
TSPAN1-201ENST00000372003 ADRA2CP18825 462 aa10.29□□□□□ -0.76
TSPAN1-201ENST00000372003 OTX2P32243 289 aa10.29□□□□□ -0.76
TSPAN1-201ENST00000372003 PRSS3P35030 304 aa10.29□□□□□ -0.76
TSPAN1-201ENST00000372003 STARP49675 285 aa10.29□□□□□ -0.76
TSPAN1-201ENST00000372003 EMP2P54851 167 aa10.29□□□□□ -0.76
TSPAN1-201ENST00000372003 RAB38P57729 211 aa10.29□□□□□ -0.76
TSPAN1-201ENST00000372003 TAS2R19P59542 299 aa10.29□□□□□ -0.76
TSPAN1-201ENST00000372003 RPS4XP62701 263 aaKnown RBP10.29□□□□□ -0.76
TSPAN1-201ENST00000372003 BTG2P78543 158 aa10.29□□□□□ -0.76
TSPAN1-201ENST00000372003 EGR3Q06889 387 aa10.29□□□□□ -0.76
TSPAN1-201ENST00000372003 RASGEF1BQ0VAM2 473 aa10.29□□□□□ -0.76
TSPAN1-201ENST00000372003 ZNF141Q15928 474 aa10.29□□□□□ -0.76
TSPAN1-201ENST00000372003 PRICKLE4Q2TBC4 344 aa10.29□□□□□ -0.76
TSPAN1-201ENST00000372003 LINC01590Q5TEZ4 76 aa10.29□□□□□ -0.76
TSPAN1-201ENST00000372003 ARMC10Q8N2F6 343 aa10.29□□□□□ -0.76
TSPAN1-201ENST00000372003 C12orf45Q8N5I9 185 aaPredicted RBP10.29□□□□□ -0.76
TSPAN1-201ENST00000372003 KDF1Q8NAX2 398 aaPredicted RBP10.29□□□□□ -0.76
TSPAN1-201ENST00000372003 TMEM52Q8NDY8 209 aa10.29□□□□□ -0.76
TSPAN1-201ENST00000372003 OR2Y1Q8NGV0 311 aa10.29□□□□□ -0.76
TSPAN1-201ENST00000372003 GRHL3Q8TE85 626 aa10.29□□□□□ -0.76
TSPAN1-201ENST00000372003 OIT3Q8WWZ8 545 aa10.29□□□□□ -0.76
TSPAN1-201ENST00000372003 CTHRC1Q96CG8 243 aa10.29□□□□□ -0.76
TSPAN1-201ENST00000372003 DMRTA2Q96SC8 542 aa10.29□□□□□ -0.76
TSPAN1-201ENST00000372003 ALG12Q9BV10 488 aa10.29□□□□□ -0.76
TSPAN1-201ENST00000372003 SEMA4CQ9C0C4 833 aa10.29□□□□□ -0.76
TSPAN1-201ENST00000372003 COMMD4Q9H0A8 199 aa10.29□□□□□ -0.76
TSPAN1-201ENST00000372003 WDR54Q9H977 334 aa10.29□□□□□ -0.76
TSPAN1-201ENST00000372003 TMEM138Q9NPI0 162 aa10.29□□□□□ -0.76
TSPAN1-201ENST00000372003 DNAJB12Q9NXW2 375 aaKnown RBP10.29□□□□□ -0.76
TSPAN1-201ENST00000372003 NXT1Q9UKK6 140 aaKnown RBP10.29□□□□□ -0.76
TSPAN1-201ENST00000372003 TRAV14DV4A0A0A6YYC5 116 aa10.28□□□□□ -0.76
TSPAN1-201ENST00000372003 A0A0A6YYH2 397 aa10.28□□□□□ -0.76
TSPAN1-201ENST00000372003 A6NJ64 397 aa10.28□□□□□ -0.76
TSPAN1-201ENST00000372003 IDSB3KWA1 339 aa10.28□□□□□ -0.76
TSPAN1-201ENST00000372003 CYR61O00622 381 aa10.28□□□□□ -0.76
TSPAN1-201ENST00000372003 CTAG2O75638 210 aa10.28□□□□□ -0.76
TSPAN1-201ENST00000372003 ABHD16AO95870 558 aa10.28□□□□□ -0.76
TSPAN1-201ENST00000372003 TXNDC12O95881 172 aa10.28□□□□□ -0.76
TSPAN1-201ENST00000372003 UMODP07911 640 aa10.28□□□□□ -0.76
TSPAN1-201ENST00000372003 NGFRP08138 427 aa10.28□□□□□ -0.76
TSPAN1-201ENST00000372003 MST1P26927 711 aa10.28□□□□□ -0.76
TSPAN1-201ENST00000372003 GABRA3P34903 492 aa10.28□□□□□ -0.76
TSPAN1-201ENST00000372003 RPL4P36578 427 aaKnown RBP10.28□□□□□ -0.76
TSPAN1-201ENST00000372003 CBX5P45973 191 aa10.28□□□□□ -0.76
TSPAN1-201ENST00000372003 CLDN12P56749 244 aa10.28□□□□□ -0.76
TSPAN1-201ENST00000372003 SORDQ00796 357 aa10.28□□□□□ -0.76
TSPAN1-201ENST00000372003 TLE3Q04726 772 aa10.28□□□□□ -0.76
TSPAN1-201ENST00000372003 SCRN3Q0VDG4 424 aa10.28□□□□□ -0.76
TSPAN1-201ENST00000372003 EMC4Q5J8M3 183 aa10.28□□□□□ -0.76
TSPAN1-201ENST00000372003 ATP1A1-AS1Q5TC04 95 aa10.28□□□□□ -0.76
TSPAN1-201ENST00000372003 DCAF12L2Q5VW00 463 aa10.28□□□□□ -0.76
TSPAN1-201ENST00000372003 GLT8D1Q68CQ7 371 aa10.28□□□□□ -0.76
TSPAN1-201ENST00000372003 FAAP20Q6NZ36 180 aa10.28□□□□□ -0.76
TSPAN1-201ENST00000372003 FDX2Q6P4F2 183 aa10.28□□□□□ -0.76
TSPAN1-201ENST00000372003 C11orf88Q6PI97 169 aa10.28□□□□□ -0.76
TSPAN1-201ENST00000372003 NUP54Q7Z3B4 507 aa10.28□□□□□ -0.76
TSPAN1-201ENST00000372003 ZNF546Q86UE3 836 aa10.28□□□□□ -0.76
TSPAN1-201ENST00000372003 ZNF440Q8IYI8 595 aa10.28□□□□□ -0.76
TSPAN1-201ENST00000372003 CLEC1AQ8NC01 280 aa10.28□□□□□ -0.76
TSPAN1-201ENST00000372003 GPX8Q8TED1 209 aa10.28□□□□□ -0.76
TSPAN1-201ENST00000372003 WDR89Q96FK6 387 aaPredicted RBP10.28□□□□□ -0.76
TSPAN1-201ENST00000372003 PTCHD1Q96NR3 888 aa10.28□□□□□ -0.76
TSPAN1-201ENST00000372003 MESP1Q9BRJ9 268 aa10.28□□□□□ -0.76
TSPAN1-201ENST00000372003 TTTY10Q9BZA0 68 aa10.28□□□□□ -0.76
TSPAN1-201ENST00000372003 TGIF2Q9GZN2 237 aa10.28□□□□□ -0.76
TSPAN1-201ENST00000372003 VN1R1Q9GZP7 353 aa10.28□□□□□ -0.76
TSPAN1-201ENST00000372003 EXO5Q9H790 373 aa10.28□□□□□ -0.76
TSPAN1-201ENST00000372003 IFT22Q9H7X7 185 aa10.28□□□□□ -0.76
TSPAN1-201ENST00000372003 LANCL2Q9NS86 450 aa10.28□□□□□ -0.76
TSPAN1-201ENST00000372003 FBXO34Q9NWN3 711 aa10.28□□□□□ -0.76
TSPAN1-201ENST00000372003 TAS2R3Q9NYW6 316 aa10.28□□□□□ -0.76
TSPAN1-201ENST00000372003 TMEM14AQ9Y6G1 99 aa10.28□□□□□ -0.76
TSPAN1-201ENST00000372003 PQLC2LA1A4F0 135 aa10.27□□□□□ -0.77
TSPAN1-201ENST00000372003 CDC14CA4D256 554 aa10.27□□□□□ -0.77
TSPAN1-201ENST00000372003 OR6C68A6NDL8 312 aa10.27□□□□□ -0.77
TSPAN1-201ENST00000372003 CLDN4O14493 209 aa10.27□□□□□ -0.77
TSPAN1-201ENST00000372003 KDM4BO94953 1096 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms