RNA–Protein interactions for RNA: ENST00000371447.3

PDE6C-201, Transcript of phosphodiesterase 6C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6C, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6C-201ENST00000371447 GABARAPH6UMI1 98 aa10.48□□□□□ -0.73
PDE6C-201ENST00000371447 TNFRSF10AO00220 468 aa10.48□□□□□ -0.73
PDE6C-201ENST00000371447 PLATP00750 562 aa10.48□□□□□ -0.73
PDE6C-201ENST00000371447 DNASE1P24855 282 aa10.48□□□□□ -0.73
PDE6C-201ENST00000371447 SLC22A10Q63ZE4 541 aa10.48□□□□□ -0.73
PDE6C-201ENST00000371447 CFAP77Q6ZQR2 320 aa10.48□□□□□ -0.73
PDE6C-201ENST00000371447 HAVCR2Q8TDQ0 301 aa10.48□□□□□ -0.73
PDE6C-201ENST00000371447 ASB10Q8WXI3 467 aa10.48□□□□□ -0.73
PDE6C-201ENST00000371447 GUCD1Q96NT3 240 aa10.48□□□□□ -0.73
PDE6C-201ENST00000371447 RBM24Q9BX46 236 aaKnown RBP10.48□□□□□ -0.73
PDE6C-201ENST00000371447 ELL3Q9HB65 397 aaPredicted RBP10.48□□□□□ -0.73
PDE6C-201ENST00000371447 HHLA2Q9UM44 414 aa10.48□□□□□ -0.73
PDE6C-201ENST00000371447 B3GALT1Q9Y5Z6 326 aa10.48□□□□□ -0.73
PDE6C-201ENST00000371447 PYCARD-AS1I3L0S3 204 aa10.48□□□□□ -0.73
PDE6C-201ENST00000371447 SYT7O43581 403 aa10.48□□□□□ -0.73
PDE6C-201ENST00000371447 CTAG2O75638 210 aa10.48□□□□□ -0.73
PDE6C-201ENST00000371447 C1QBP02746 253 aa10.48□□□□□ -0.73
PDE6C-201ENST00000371447 APOBEC1P41238 236 aaKnown RBP10.48□□□□□ -0.73
PDE6C-201ENST00000371447 DAP3P51398 398 aaKnown RBP10.48□□□□□ -0.73
PDE6C-201ENST00000371447 C4orf46Q504U0 113 aa10.48□□□□□ -0.73
PDE6C-201ENST00000371447 YRDCQ86U90 279 aaKnown RBP10.48□□□□□ -0.73
PDE6C-201ENST00000371447 ZNF101Q8IZC7 436 aa10.48□□□□□ -0.73
PDE6C-201ENST00000371447 LILRB4Q8NHJ6 448 aa10.48□□□□□ -0.73
PDE6C-201ENST00000371447 LILRB1Q8NHL6 650 aaPredicted RBP10.48□□□□□ -0.73
PDE6C-201ENST00000371447 POC1BQ8TC44 478 aa10.48□□□□□ -0.73
PDE6C-201ENST00000371447 SLC22A8Q8TCC7 542 aa10.48□□□□□ -0.73
PDE6C-201ENST00000371447 SPACA9Q96E40 222 aaPredicted RBP10.48□□□□□ -0.73
PDE6C-201ENST00000371447 CHST6Q9GZX3 395 aa10.48□□□□□ -0.73
PDE6C-201ENST00000371447 SLC39A1Q9NY26 324 aa10.48□□□□□ -0.73
PDE6C-201ENST00000371447 TECTAO75443 2155 aa10.48□□□□□ -0.73
PDE6C-201ENST00000371447 TRBV5-5A0A0J9YX44 114 aa10.48□□□□□ -0.73
PDE6C-201ENST00000371447 IGHV3-9P01782 118 aa10.48□□□□□ -0.73
PDE6C-201ENST00000371447 QDPRP09417 244 aa10.48□□□□□ -0.73
PDE6C-201ENST00000371447 HTR2CP28335 458 aa10.48□□□□□ -0.73
PDE6C-201ENST00000371447 STARP49675 285 aa10.48□□□□□ -0.73
PDE6C-201ENST00000371447 SLC22A6Q4U2R8 563 aa10.48□□□□□ -0.73
PDE6C-201ENST00000371447 LAMTOR1Q6IAA8 161 aa10.48□□□□□ -0.73
PDE6C-201ENST00000371447 OR4C16Q8NGL9 310 aa10.48□□□□□ -0.73
PDE6C-201ENST00000371447 OR2AJ1Q8NGZ0 328 aa10.48□□□□□ -0.73
PDE6C-201ENST00000371447 CCNL2Q96S94 520 aaPredicted RBP10.48□□□□□ -0.73
PDE6C-201ENST00000371447 UQCC2Q9BRT2 126 aa10.48□□□□□ -0.73
PDE6C-201ENST00000371447 CA10Q9NS85 328 aa10.48□□□□□ -0.73
PDE6C-201ENST00000371447 TMEM272A0A1B0GTI8 110 aa10.47□□□□□ -0.73
PDE6C-201ENST00000371447 GGT3PA6NGU5 568 aa10.47□□□□□ -0.73
PDE6C-201ENST00000371447 ACOT7O00154 380 aa10.47□□□□□ -0.73
PDE6C-201ENST00000371447 ZNF780AO75290 641 aaPredicted RBP10.47□□□□□ -0.73
PDE6C-201ENST00000371447 PLPPR5Q32ZL2 321 aa10.47□□□□□ -0.73
PDE6C-201ENST00000371447 BTN2A1Q7KYR7 527 aa10.47□□□□□ -0.73
PDE6C-201ENST00000371447 TCTE3Q8IZS6 198 aa10.47□□□□□ -0.73
PDE6C-201ENST00000371447 LINC00469Q8N7U9 141 aa10.47□□□□□ -0.73
PDE6C-201ENST00000371447 WDSUB1Q8N9V3 476 aa10.47□□□□□ -0.73
PDE6C-201ENST00000371447 AGBL5Q8NDL9 886 aa10.47□□□□□ -0.73
PDE6C-201ENST00000371447 OR52N4Q8NGI2 321 aa10.47□□□□□ -0.73
PDE6C-201ENST00000371447 ZFAND1Q8TCF1 268 aa10.47□□□□□ -0.73
PDE6C-201ENST00000371447 RHBDD1Q8TEB9 315 aa10.47□□□□□ -0.73
PDE6C-201ENST00000371447 HGDQ93099 445 aa10.47□□□□□ -0.73
PDE6C-201ENST00000371447 SCMH1Q96GD3 660 aa10.47□□□□□ -0.73
PDE6C-201ENST00000371447 C19orf25Q9UFG5 118 aaPredicted RBP10.47□□□□□ -0.73
PDE6C-201ENST00000371447 C9J4A7 227 aa10.47□□□□□ -0.73
PDE6C-201ENST00000371447 ADAM10O14672 748 aa10.47□□□□□ -0.73
PDE6C-201ENST00000371447 PATE4P0C8F1 98 aa10.47□□□□□ -0.73
PDE6C-201ENST00000371447 PRSS3P35030 304 aa10.47□□□□□ -0.73
PDE6C-201ENST00000371447 BLVRAP53004 296 aa10.47□□□□□ -0.73
PDE6C-201ENST00000371447 TSPAN5P62079 268 aa10.47□□□□□ -0.73
PDE6C-201ENST00000371447 LRRC37A5PQ49AS3 106 aa10.47□□□□□ -0.73
PDE6C-201ENST00000371447 GLT8D1Q68CQ7 371 aa10.47□□□□□ -0.73
PDE6C-201ENST00000371447 LIN54Q6MZP7 749 aa10.47□□□□□ -0.73
PDE6C-201ENST00000371447 FAM57BQ71RH2 274 aa10.47□□□□□ -0.73
PDE6C-201ENST00000371447 SLC38A6Q8IZM9 456 aa10.47□□□□□ -0.73
PDE6C-201ENST00000371447 FTMTQ8N4E7 242 aa10.47□□□□□ -0.73
PDE6C-201ENST00000371447 ZNF283Q8N7M2 679 aa10.47□□□□□ -0.73
PDE6C-201ENST00000371447 OR4D6Q8NGJ1 314 aa10.47□□□□□ -0.73
PDE6C-201ENST00000371447 STK35Q8TDR2 534 aa10.47□□□□□ -0.73
PDE6C-201ENST00000371447 TNFAIP8L1Q8WVP5 186 aa10.47□□□□□ -0.73
PDE6C-201ENST00000371447 ST8SIA1Q92185 356 aa10.47□□□□□ -0.73
PDE6C-201ENST00000371447 GPER1Q99527 375 aa10.47□□□□□ -0.73
PDE6C-201ENST00000371447 BANF2Q9H503 90 aa10.47□□□□□ -0.73
PDE6C-201ENST00000371447 EXO5Q9H790 373 aa10.47□□□□□ -0.73
PDE6C-201ENST00000371447 PISDQ9UG56 409 aa10.47□□□□□ -0.73
PDE6C-201ENST00000371447 SLC5A6Q9Y289 635 aa10.47□□□□□ -0.73
PDE6C-201ENST00000371447 A0A1B0GVI7 797 aa10.46□□□□□ -0.73
PDE6C-201ENST00000371447 C5orf63A6NC05 138 aa10.46□□□□□ -0.73
PDE6C-201ENST00000371447 TRAPPC2P0DI81 140 aa10.46□□□□□ -0.73
PDE6C-201ENST00000371447 TRAPPC2BP0DI82 140 aa10.46□□□□□ -0.73
PDE6C-201ENST00000371447 AP3S2P59780 193 aa10.46□□□□□ -0.73
PDE6C-201ENST00000371447 PSMA6P60900 246 aaKnown RBP10.46□□□□□ -0.73
PDE6C-201ENST00000371447 OR52W1Q6IF63 320 aa10.46□□□□□ -0.73
PDE6C-201ENST00000371447 DNM1P34Q6PK57 102 aa10.46□□□□□ -0.73
PDE6C-201ENST00000371447 FAM198BQ6UWH4 519 aa10.46□□□□□ -0.73
PDE6C-201ENST00000371447 LILRB2Q8N423 598 aa10.46□□□□□ -0.73
PDE6C-201ENST00000371447 GVQW1Q8N7I0 195 aa10.46□□□□□ -0.73
PDE6C-201ENST00000371447 MFSD8Q8NHS3 518 aa10.46□□□□□ -0.73
PDE6C-201ENST00000371447 ASB17Q8WXJ9 295 aa10.46□□□□□ -0.73
PDE6C-201ENST00000371447 NAT6Q93015 286 aa10.46□□□□□ -0.73
PDE6C-201ENST00000371447 ADAT3Q96EY9 351 aaPredicted RBP10.46□□□□□ -0.73
PDE6C-201ENST00000371447 ZNF407Q9C0G0 2248 aa10.46□□□□□ -0.73
PDE6C-201ENST00000371447 D6RAR5 112 aa10.46□□□□□ -0.73
PDE6C-201ENST00000371447 GLSO94925 669 aaPredicted RBP10.46□□□□□ -0.73
PDE6C-201ENST00000371447 POU4F3Q15319 338 aa10.46□□□□□ -0.73
PDE6C-201ENST00000371447 BATF2Q8N1L9 274 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms