RNA–Protein interactions for RNA: ENST00000369592.1

SMNDC1-201, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SMNDC1, Length 1,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-201ENST00000369592 REEP1Q9H902 201 aa17.52■□□□□ 0.4
SMNDC1-201ENST00000369592 SRA1Q9HD15 236 aaKnown RBP17.52■□□□□ 0.4
SMNDC1-201ENST00000369592 COL6A5A8TX70 2615 aa17.52■□□□□ 0.4
SMNDC1-201ENST00000369592 TCRBV3S1A0A5B6 114 aa17.51■□□□□ 0.39
SMNDC1-201ENST00000369592 RER1O15258 196 aa17.51■□□□□ 0.39
SMNDC1-201ENST00000369592 GYG2O15488 501 aa17.51■□□□□ 0.39
SMNDC1-201ENST00000369592 RENP00797 406 aa17.51■□□□□ 0.39
SMNDC1-201ENST00000369592 ADH4P08319 380 aa17.51■□□□□ 0.39
SMNDC1-201ENST00000369592 TUBG1P23258 451 aa17.51■□□□□ 0.39
SMNDC1-201ENST00000369592 MAGEB1P43366 347 aa17.51■□□□□ 0.39
SMNDC1-201ENST00000369592 PPP2R2BQ00005 443 aa17.51■□□□□ 0.39
SMNDC1-201ENST00000369592 BNIP1Q12981 228 aa17.51■□□□□ 0.39
SMNDC1-201ENST00000369592 GGTLC2Q14390 218 aa17.51■□□□□ 0.39
SMNDC1-201ENST00000369592 CARTPTQ16568 116 aa17.51■□□□□ 0.39
SMNDC1-201ENST00000369592 MEP1BQ16820 701 aa17.51■□□□□ 0.39
SMNDC1-201ENST00000369592 NKPD1Q17RQ9 610 aa17.51■□□□□ 0.39
SMNDC1-201ENST00000369592 CLEC12AQ5QGZ9 265 aa17.51■□□□□ 0.39
SMNDC1-201ENST00000369592 SPATA46Q5T0L3 261 aa17.51■□□□□ 0.39
SMNDC1-201ENST00000369592 UNQ6126/PRO20091Q6UXV3 157 aa17.51■□□□□ 0.39
SMNDC1-201ENST00000369592 TMEM179BQ7Z7N9 219 aa17.51■□□□□ 0.39
SMNDC1-201ENST00000369592 JAZF1Q86VZ6 243 aa17.51■□□□□ 0.39
SMNDC1-201ENST00000369592 SDR9C7Q8NEX9 313 aa17.51■□□□□ 0.39
SMNDC1-201ENST00000369592 OR1F12Q8NHA8 337 aa17.51■□□□□ 0.39
SMNDC1-201ENST00000369592 ABHD4Q8TB40 342 aa17.51■□□□□ 0.39
SMNDC1-201ENST00000369592 RDH5Q92781 318 aa17.51■□□□□ 0.39
SMNDC1-201ENST00000369592 C1orf159Q96HA4 380 aa17.51■□□□□ 0.39
SMNDC1-201ENST00000369592 LRGUKQ96M69 825 aa17.51■□□□□ 0.39
SMNDC1-201ENST00000369592 POFUT1Q9H488 388 aa17.51■□□□□ 0.39
SMNDC1-201ENST00000369592 RERGLQ9H628 205 aa17.51■□□□□ 0.39
SMNDC1-201ENST00000369592 ELOVL3Q9HB03 270 aa17.51■□□□□ 0.39
SMNDC1-201ENST00000369592 RPRD1BQ9NQG5 326 aaKnown RBP17.51■□□□□ 0.39
SMNDC1-201ENST00000369592 TUBG2Q9NRH3 451 aa17.51■□□□□ 0.39
SMNDC1-201ENST00000369592 GPR160Q9UJ42 338 aa17.51■□□□□ 0.39
SMNDC1-201ENST00000369592 U3KQV3 271 aa17.51■□□□□ 0.39
SMNDC1-201ENST00000369592 DHRS12A0PJE2 317 aa17.5■□□□□ 0.39
SMNDC1-201ENST00000369592 ARRDC5A6NEK1 342 aa17.5■□□□□ 0.39
SMNDC1-201ENST00000369592 HOXB6P17509 224 aaKnown RBP17.5■□□□□ 0.39
SMNDC1-201ENST00000369592 ACHEP22303 614 aa17.5■□□□□ 0.39
SMNDC1-201ENST00000369592 GGT2P36268 569 aa17.5■□□□□ 0.39
SMNDC1-201ENST00000369592 HTR5AP47898 357 aa17.5■□□□□ 0.39
SMNDC1-201ENST00000369592 KHDRBS1Q07666 443 aaKnown RBP eCLIP17.5■□□□□ 0.39
SMNDC1-201ENST00000369592 MOGQ16653 247 aa17.5■□□□□ 0.39
SMNDC1-201ENST00000369592 PCGF3Q3KNV8 242 aa17.5■□□□□ 0.39
SMNDC1-201ENST00000369592 ALKBH6Q3KRA9 238 aa17.5■□□□□ 0.39
SMNDC1-201ENST00000369592 SLC35F1Q5T1Q4 408 aa17.5■□□□□ 0.39
SMNDC1-201ENST00000369592 CYB5R2Q6BCY4 276 aa17.5■□□□□ 0.39
SMNDC1-201ENST00000369592 HIPK1Q86Z02 1210 aa17.5■□□□□ 0.39
SMNDC1-201ENST00000369592 PAPD5Q8NDF8 572 aaKnown RBP17.5■□□□□ 0.39
SMNDC1-201ENST00000369592 OR52E2Q8NGJ4 325 aa17.5■□□□□ 0.39
SMNDC1-201ENST00000369592 OR4Q3Q8NH05 313 aa17.5■□□□□ 0.39
SMNDC1-201ENST00000369592 ZNRF4Q8WWF5 429 aa17.5■□□□□ 0.39
SMNDC1-201ENST00000369592 SLC7A6Q92536 515 aa17.5■□□□□ 0.39
SMNDC1-201ENST00000369592 SOX7Q9BT81 388 aa17.5■□□□□ 0.39
SMNDC1-201ENST00000369592 CADM1Q9BY67 442 aaKnown RBP17.5■□□□□ 0.39
SMNDC1-201ENST00000369592 NMNAT2Q9BZQ4 307 aa17.5■□□□□ 0.39
SMNDC1-201ENST00000369592 CHODLQ9H9P2 273 aa17.5■□□□□ 0.39
SMNDC1-201ENST00000369592 YAE1D1Q9NRH1 226 aa17.5■□□□□ 0.39
SMNDC1-201ENST00000369592 MRPL22Q9NWU5 206 aaKnown RBP17.5■□□□□ 0.39
SMNDC1-201ENST00000369592 TMEM160Q9NX00 188 aa17.5■□□□□ 0.39
SMNDC1-201ENST00000369592 PLEK2Q9NYT0 353 aa17.5■□□□□ 0.39
SMNDC1-201ENST00000369592 POMPQ9Y244 141 aa17.5■□□□□ 0.39
SMNDC1-201ENST00000369592 TANC2Q9HCD6 1990 aa17.49■□□□□ 0.39
SMNDC1-201ENST00000369592 SVEP1Q4LDE5 3571 aa17.49■□□□□ 0.39
SMNDC1-201ENST00000369592 ATRQ13535 2644 aa17.49■□□□□ 0.39
SMNDC1-201ENST00000369592 A8MV72 311 aaPredicted RBP17.49■□□□□ 0.39
SMNDC1-201ENST00000369592 HAX1O00165 279 aa17.49■□□□□ 0.39
SMNDC1-201ENST00000369592 GSC2O15499 205 aa17.49■□□□□ 0.39
SMNDC1-201ENST00000369592 DNAJC8O75937 253 aaPredicted RBP17.49■□□□□ 0.39
SMNDC1-201ENST00000369592 GSTM3P21266 225 aa17.49■□□□□ 0.39
SMNDC1-201ENST00000369592 GZMKP49863 264 aa17.49■□□□□ 0.39
SMNDC1-201ENST00000369592 GLO1Q04760 184 aa17.49■□□□□ 0.39
SMNDC1-201ENST00000369592 PSG7Q13046 419 aa17.49■□□□□ 0.39
SMNDC1-201ENST00000369592 SLC18B1Q6NT16 456 aa17.49■□□□□ 0.39
SMNDC1-201ENST00000369592 ICA1LQ8NDH6 482 aa17.49■□□□□ 0.39
SMNDC1-201ENST00000369592 GJC3Q8NFK1 279 aa17.49■□□□□ 0.39
SMNDC1-201ENST00000369592 OR52L1Q8NGH7 329 aa17.49■□□□□ 0.39
SMNDC1-201ENST00000369592 MSI2Q96DH6 328 aaKnown RBP17.49■□□□□ 0.39
SMNDC1-201ENST00000369592 COQ7Q99807 217 aa17.49■□□□□ 0.39
SMNDC1-201ENST00000369592 NIPSNAP1Q9BPW8 284 aa17.49■□□□□ 0.39
SMNDC1-201ENST00000369592 RBM4Q9BWF3 364 aaKnown RBP17.49■□□□□ 0.39
SMNDC1-201ENST00000369592 FN3KQ9H479 309 aa17.49■□□□□ 0.39
SMNDC1-201ENST00000369592 PNRC2Q9NPJ4 139 aaKnown RBP17.49■□□□□ 0.39
SMNDC1-201ENST00000369592 CYB5R1Q9UHQ9 305 aa17.49■□□□□ 0.39
SMNDC1-201ENST00000369592 STARD10Q9Y365 291 aa17.49■□□□□ 0.39
SMNDC1-201ENST00000369592 ZSCAN5BA6NJL1 495 aa17.48■□□□□ 0.39
SMNDC1-201ENST00000369592 J3QW42 95 aa17.48■□□□□ 0.39
SMNDC1-201ENST00000369592 ABHD16AO95870 558 aa17.48■□□□□ 0.39
SMNDC1-201ENST00000369592 CST1P01037 141 aa17.48■□□□□ 0.39
SMNDC1-201ENST00000369592 DBHP09172 617 aa17.48■□□□□ 0.39
SMNDC1-201ENST00000369592 NOS3P29474 1203 aa17.48■□□□□ 0.39
SMNDC1-201ENST00000369592 GCH1P30793 250 aa17.48■□□□□ 0.39
SMNDC1-201ENST00000369592 ARHGDIAP52565 204 aa17.48■□□□□ 0.39
SMNDC1-201ENST00000369592 TMEM33P57088 247 aa17.48■□□□□ 0.39
SMNDC1-201ENST00000369592 TEKQ02763 1124 aa17.48■□□□□ 0.39
SMNDC1-201ENST00000369592 TRIP10Q15642 601 aa17.48■□□□□ 0.39
SMNDC1-201ENST00000369592 CORO6Q6QEF8 472 aa17.48■□□□□ 0.39
SMNDC1-201ENST00000369592 ARL9Q6T311 187 aa17.48■□□□□ 0.39
SMNDC1-201ENST00000369592 COLCA1Q6ZS62 124 aa17.48■□□□□ 0.39
SMNDC1-201ENST00000369592 SLC37A3Q8NCC5 494 aa17.48■□□□□ 0.39
SMNDC1-201ENST00000369592 OR10G2Q8NGC3 310 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms