RNA–Protein interactions for RNA: ENST00000368287.1

ECHDC1-201, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-201ENST00000368287 OR4C5Q8NGB2 326 aa2□□□□□ -2.09
ECHDC1-201ENST00000368287 UBALD1Q8TB05 177 aa2□□□□□ -2.09
ECHDC1-201ENST00000368287 LRRC29Q8WV35 223 aa2□□□□□ -2.09
ECHDC1-201ENST00000368287 MRGPRFQ96AM1 343 aa2□□□□□ -2.09
ECHDC1-201ENST00000368287 MCUR1Q96AQ8 359 aa2□□□□□ -2.09
ECHDC1-201ENST00000368287 TM4SF18Q96CE8 201 aa2□□□□□ -2.09
ECHDC1-201ENST00000368287 ZNF317Q96PQ6 595 aaPredicted RBP2□□□□□ -2.09
ECHDC1-201ENST00000368287 C11orf70Q9BRQ4 267 aa2□□□□□ -2.09
ECHDC1-201ENST00000368287 TEKT3Q9BXF9 490 aa2□□□□□ -2.09
ECHDC1-201ENST00000368287 UBE2ZQ9H832 354 aaPredicted RBP2□□□□□ -2.09
ECHDC1-201ENST00000368287 TMEM165Q9HC07 324 aa2□□□□□ -2.09
ECHDC1-201ENST00000368287 ACP6Q9NPH0 428 aa2□□□□□ -2.09
ECHDC1-201ENST00000368287 MTCH1Q9NZJ7 389 aa2□□□□□ -2.09
ECHDC1-201ENST00000368287 CCDC59Q9P031 241 aaKnown RBP2□□□□□ -2.09
ECHDC1-201ENST00000368287 ZNF282Q9UDV7 671 aaPredicted RBP2□□□□□ -2.09
ECHDC1-201ENST00000368287 OPN4Q9UHM6 478 aa2□□□□□ -2.09
ECHDC1-201ENST00000368287 TMED5Q9Y3A6 229 aa2□□□□□ -2.09
ECHDC1-201ENST00000368287 YTHDF2Q9Y5A9 579 aaKnown RBP2□□□□□ -2.09
ECHDC1-201ENST00000368287 KIF26AQ9ULI4 1882 aaPredicted RBP1.99□□□□□ -2.09
ECHDC1-201ENST00000368287 UBN2Q6ZU65 1347 aa1.99□□□□□ -2.09
ECHDC1-201ENST00000368287 A0A1W2PP18 115 aa1.99□□□□□ -2.09
ECHDC1-201ENST00000368287 SERPINE3A8MV23 424 aa1.99□□□□□ -2.09
ECHDC1-201ENST00000368287 H7C1H1 209 aa1.99□□□□□ -2.09
ECHDC1-201ENST00000368287 H7C417 338 aa1.99□□□□□ -2.09
ECHDC1-201ENST00000368287 HUS1O60921 280 aa1.99□□□□□ -2.09
ECHDC1-201ENST00000368287 RDH16O75452 317 aa1.99□□□□□ -2.09
ECHDC1-201ENST00000368287 GCM2O75603 506 aaPredicted RBP1.99□□□□□ -2.09
ECHDC1-201ENST00000368287 HLA-DPB1P04440 258 aa1.99□□□□□ -2.09
ECHDC1-201ENST00000368287 ARG1P05089 322 aa1.99□□□□□ -2.09
ECHDC1-201ENST00000368287 ERCC1P07992 297 aaPredicted RBP1.99□□□□□ -2.09
ECHDC1-201ENST00000368287 FGF4P08620 206 aa1.99□□□□□ -2.09
ECHDC1-201ENST00000368287 MRPL3P09001 348 aaKnown RBP1.99□□□□□ -2.09
ECHDC1-201ENST00000368287 CD3GP09693 182 aa1.99□□□□□ -2.09
ECHDC1-201ENST00000368287 OR8G3PP0DMU2 310 aa1.99□□□□□ -2.09
ECHDC1-201ENST00000368287 IGHV1-8P0DP01 117 aa1.99□□□□□ -2.09
ECHDC1-201ENST00000368287 MYL2P10916 166 aa1.99□□□□□ -2.09
ECHDC1-201ENST00000368287 CSNK2A2P19784 350 aaPredicted RBP1.99□□□□□ -2.09
ECHDC1-201ENST00000368287 RAB3BP20337 219 aa1.99□□□□□ -2.09
ECHDC1-201ENST00000368287 GALP22466 123 aa1.99□□□□□ -2.09
ECHDC1-201ENST00000368287 STOMP27105 288 aa1.99□□□□□ -2.09
ECHDC1-201ENST00000368287 RPS5P46782 204 aaKnown RBP1.99□□□□□ -2.09
ECHDC1-201ENST00000368287 UQCRFS1P47985 274 aa1.99□□□□□ -2.09
ECHDC1-201ENST00000368287 CX3CR1P49238 355 aa1.99□□□□□ -2.09
ECHDC1-201ENST00000368287 UBE2MP61081 183 aaKnown RBP1.99□□□□□ -2.09
ECHDC1-201ENST00000368287 PRR3P79522 188 aaKnown RBP1.99□□□□□ -2.09
ECHDC1-201ENST00000368287 TCP10Q12799 353 aa1.99□□□□□ -2.09
ECHDC1-201ENST00000368287 CDH17Q12864 832 aa1.99□□□□□ -2.09
ECHDC1-201ENST00000368287 TRAM2Q15035 370 aa1.99□□□□□ -2.09
ECHDC1-201ENST00000368287 HSDL1Q3SXM5 330 aa1.99□□□□□ -2.09
ECHDC1-201ENST00000368287 C5orf47Q569G3 176 aa1.99□□□□□ -2.09
ECHDC1-201ENST00000368287 Q5W150 140 aa1.99□□□□□ -2.09
ECHDC1-201ENST00000368287 TMEM53Q6P2H8 277 aa1.99□□□□□ -2.09
ECHDC1-201ENST00000368287 PRMT9Q6P2P2 845 aa1.99□□□□□ -2.09
ECHDC1-201ENST00000368287 CLEC2AQ6UVW9 174 aa1.99□□□□□ -2.09
ECHDC1-201ENST00000368287 BZW1Q7L1Q6 419 aaKnown RBP1.99□□□□□ -2.09
ECHDC1-201ENST00000368287 EIF3MQ7L2H7 374 aaKnown RBP1.99□□□□□ -2.09
ECHDC1-201ENST00000368287 CMC1Q7Z7K0 106 aa1.99□□□□□ -2.09
ECHDC1-201ENST00000368287 LUZP2Q86TE4 346 aa1.99□□□□□ -2.09
ECHDC1-201ENST00000368287 NPWQ8N729 165 aa1.99□□□□□ -2.09
ECHDC1-201ENST00000368287 C11orf72Q8NBR9 251 aa1.99□□□□□ -2.09
ECHDC1-201ENST00000368287 OR52E5Q8NH55 327 aa1.99□□□□□ -2.09
ECHDC1-201ENST00000368287 OR5K2Q8NHB8 316 aa1.99□□□□□ -2.09
ECHDC1-201ENST00000368287 ABHD3Q8WU67 409 aa1.99□□□□□ -2.09
ECHDC1-201ENST00000368287 MICU1Q9BPX6 476 aa1.99□□□□□ -2.09
ECHDC1-201ENST00000368287 RSPO3Q9BXY4 272 aaPredicted RBP1.99□□□□□ -2.09
ECHDC1-201ENST00000368287 UCK2Q9BZX2 261 aa1.99□□□□□ -2.09
ECHDC1-201ENST00000368287 ACTR3CQ9C0K3 210 aaPredicted RBP1.99□□□□□ -2.09
ECHDC1-201ENST00000368287 SLC7A5P2Q9GIP4 190 aa1.99□□□□□ -2.09
ECHDC1-201ENST00000368287 SYNDIG1Q9H7V2 258 aa1.99□□□□□ -2.09
ECHDC1-201ENST00000368287 EDA2RQ9HAV5 297 aa1.99□□□□□ -2.09
ECHDC1-201ENST00000368287 MTFP1Q9UDX5 166 aa1.99□□□□□ -2.09
ECHDC1-201ENST00000368287 KCNE3Q9Y6H6 103 aa1.99□□□□□ -2.09
ECHDC1-201ENST00000368287 IGKV1-8A0A0C4DH67 115 aa1.98□□□□□ -2.09
ECHDC1-201ENST00000368287 ZNF705GA8MUZ8 300 aaPredicted RBP1.98□□□□□ -2.09
ECHDC1-201ENST00000368287 ZNF207O43670 478 aaKnown RBP1.98□□□□□ -2.09
ECHDC1-201ENST00000368287 CACNG3O60359 315 aa1.98□□□□□ -2.09
ECHDC1-201ENST00000368287 AQP8O94778 261 aa1.98□□□□□ -2.09
ECHDC1-201ENST00000368287 ADRA2AP08913 450 aa1.98□□□□□ -2.09
ECHDC1-201ENST00000368287 RHOXF2BP0C7M4 288 aa1.98□□□□□ -2.09
ECHDC1-201ENST00000368287 CISD3P0C7P0 127 aa1.98□□□□□ -2.09
ECHDC1-201ENST00000368287 CTRB1P17538 263 aa1.98□□□□□ -2.09
ECHDC1-201ENST00000368287 ATF6P18850 670 aa1.98□□□□□ -2.09
ECHDC1-201ENST00000368287 F2RP25116 425 aa1.98□□□□□ -2.09
ECHDC1-201ENST00000368287 NBL1P41271 181 aa1.98□□□□□ -2.09
ECHDC1-201ENST00000368287 SLC1A2P43004 574 aa1.98□□□□□ -2.09
ECHDC1-201ENST00000368287 ATP5OP48047 213 aa1.98□□□□□ -2.09
ECHDC1-201ENST00000368287 LOXL1Q08397 574 aaPredicted RBP1.98□□□□□ -2.09
ECHDC1-201ENST00000368287 ZNF266Q14584 549 aa1.98□□□□□ -2.09
ECHDC1-201ENST00000368287 SF3A2Q15428 464 aaKnown RBP1.98□□□□□ -2.09
ECHDC1-201ENST00000368287 SAXO2Q658L1 398 aa1.98□□□□□ -2.09
ECHDC1-201ENST00000368287 CENPQQ7L2Z9 268 aaPredicted RBP1.98□□□□□ -2.09
ECHDC1-201ENST00000368287 WDR86Q86TI4 376 aa1.98□□□□□ -2.09
ECHDC1-201ENST00000368287 GABRG1Q8N1C3 465 aa1.98□□□□□ -2.09
ECHDC1-201ENST00000368287 ARRDC1Q8N5I2 433 aa1.98□□□□□ -2.09
ECHDC1-201ENST00000368287 METTL13Q8N6R0 699 aa1.98□□□□□ -2.09
ECHDC1-201ENST00000368287 OR56A4Q8NGH8 313 aa1.98□□□□□ -2.09
ECHDC1-201ENST00000368287 OR52E2Q8NGJ4 325 aa1.98□□□□□ -2.09
ECHDC1-201ENST00000368287 OR9G4Q8NGQ1 327 aa1.98□□□□□ -2.09
ECHDC1-201ENST00000368287 C15orf40Q8WUR7 153 aa1.98□□□□□ -2.09
ECHDC1-201ENST00000368287 C8orf44Q96CB5 159 aa1.98□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms