RNA–Protein interactions for RNA: ENST00000367279.8

PTPN7-202, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN7, Length 3,265 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-202ENST00000367279 SLC6A7Q99884 636 aa11.06□□□□□ -0.64
PTPN7-202ENST00000367279 UTP23Q9BRU9 249 aaKnown RBP11.06□□□□□ -0.64
PTPN7-202ENST00000367279 TMPRSS13Q9BYE2 586 aa11.06□□□□□ -0.64
PTPN7-202ENST00000367279 HMSDA8MTL9 139 aa11.06□□□□□ -0.64
PTPN7-202ENST00000367279 EEF1E1-BLOC1S5C9J1V9 151 aa11.06□□□□□ -0.64
PTPN7-202ENST00000367279 PLPP3O14495 311 aa11.06□□□□□ -0.64
PTPN7-202ENST00000367279 KCNAB3O43448 404 aa11.06□□□□□ -0.64
PTPN7-202ENST00000367279 MT-ATP6P00846 226 aa11.06□□□□□ -0.64
PTPN7-202ENST00000367279 IGKV3-11P04433 115 aa11.06□□□□□ -0.64
PTPN7-202ENST00000367279 DCNP07585 359 aaKnown RBP11.06□□□□□ -0.64
PTPN7-202ENST00000367279 CSRP1P21291 193 aaKnown RBP11.06□□□□□ -0.64
PTPN7-202ENST00000367279 CRABP1P29762 137 aa11.06□□□□□ -0.64
PTPN7-202ENST00000367279 NR0B2Q15466 257 aa11.06□□□□□ -0.64
PTPN7-202ENST00000367279 RNASE10Q5GAN6 216 aaKnown RBP11.06□□□□□ -0.64
PTPN7-202ENST00000367279 ZNF660Q6AZW8 331 aaPredicted RBP11.06□□□□□ -0.64
PTPN7-202ENST00000367279 TRAPPC6BQ86SZ2 158 aa11.06□□□□□ -0.64
PTPN7-202ENST00000367279 CATSPERDQ86XM0 798 aa11.06□□□□□ -0.64
PTPN7-202ENST00000367279 OR4D6Q8NGJ1 314 aa11.06□□□□□ -0.64
PTPN7-202ENST00000367279 THRSPQ92748 146 aa11.06□□□□□ -0.64
PTPN7-202ENST00000367279 C8orf44Q96CB5 159 aa11.06□□□□□ -0.64
PTPN7-202ENST00000367279 REG4Q9BYZ8 158 aa11.06□□□□□ -0.64
PTPN7-202ENST00000367279 GPR160Q9UJ42 338 aa11.06□□□□□ -0.64
PTPN7-202ENST00000367279 MMACHCQ9Y4U1 282 aa11.06□□□□□ -0.64
PTPN7-202ENST00000367279 C13orf42A0A1B0GVH6 325 aa11.05□□□□□ -0.64
PTPN7-202ENST00000367279 ALG1L2C9J202 215 aa11.05□□□□□ -0.64
PTPN7-202ENST00000367279 PMS2P2O95744 297 aa11.05□□□□□ -0.64
PTPN7-202ENST00000367279 PAPD4Q6PIY7 484 aaKnown RBP11.05□□□□□ -0.64
PTPN7-202ENST00000367279 CDH26Q8IXH8 852 aa11.05□□□□□ -0.64
PTPN7-202ENST00000367279 ZNF519Q8TB69 540 aa11.05□□□□□ -0.64
PTPN7-202ENST00000367279 ZBTB8AQ96BR9 441 aa11.05□□□□□ -0.64
PTPN7-202ENST00000367279 IFT46Q9NQC8 304 aa11.05□□□□□ -0.64
PTPN7-202ENST00000367279 CTSFQ9UBX1 484 aa11.05□□□□□ -0.64
PTPN7-202ENST00000367279 A0A1B0GTQ1 180 aa11.05□□□□□ -0.64
PTPN7-202ENST00000367279 KANTRA0A1W2PQU2 76 aa11.05□□□□□ -0.64
PTPN7-202ENST00000367279 EIF4E2O60573 245 aaKnown RBP11.05□□□□□ -0.64
PTPN7-202ENST00000367279 FOLR1P15328 257 aa11.05□□□□□ -0.64
PTPN7-202ENST00000367279 LUMP51884 338 aaPredicted RBP11.05□□□□□ -0.64
PTPN7-202ENST00000367279 SLC26A5P58743 744 aa11.05□□□□□ -0.64
PTPN7-202ENST00000367279 TLE3Q04726 772 aa11.05□□□□□ -0.64
PTPN7-202ENST00000367279 DHRS2Q13268 280 aa11.05□□□□□ -0.64
PTPN7-202ENST00000367279 ATPAF1Q5TC12 328 aaPredicted RBP11.05□□□□□ -0.64
PTPN7-202ENST00000367279 CARD17Q5XLA6 110 aa11.05□□□□□ -0.64
PTPN7-202ENST00000367279 GRINAQ7Z429 371 aa11.05□□□□□ -0.64
PTPN7-202ENST00000367279 FJX1Q86VR8 437 aa11.05□□□□□ -0.64
PTPN7-202ENST00000367279 ZNF101Q8IZC7 436 aa11.05□□□□□ -0.64
PTPN7-202ENST00000367279 OR13C9Q8NGT0 318 aa11.05□□□□□ -0.64
PTPN7-202ENST00000367279 PRMT8Q9NR22 394 aaPredicted RBP11.05□□□□□ -0.64
PTPN7-202ENST00000367279 KLK13Q9UKR3 277 aa11.05□□□□□ -0.64
PTPN7-202ENST00000367279 R4GMQ9 66 aa11.05□□□□□ -0.64
PTPN7-202ENST00000367279 METTL21EPA6NDL7 271 aa11.04□□□□□ -0.64
PTPN7-202ENST00000367279 OR5H14A6NHG9 310 aa11.04□□□□□ -0.64
PTPN7-202ENST00000367279 TSPAN2O60636 221 aa11.04□□□□□ -0.64
PTPN7-202ENST00000367279 B3GALNT1O75752 331 aa11.04□□□□□ -0.64
PTPN7-202ENST00000367279 HOXD4P09016 255 aaPredicted RBP11.04□□□□□ -0.64
PTPN7-202ENST00000367279 SLC2A1P11166 492 aa11.04□□□□□ -0.64
PTPN7-202ENST00000367279 CSNK1EP49674 416 aaKnown RBP11.04□□□□□ -0.64
PTPN7-202ENST00000367279 PRKXP51817 358 aa11.04□□□□□ -0.64
PTPN7-202ENST00000367279 KLHL24Q6TFL4 600 aa11.04□□□□□ -0.64
PTPN7-202ENST00000367279 ARSKQ6UWY0 536 aa11.04□□□□□ -0.64
PTPN7-202ENST00000367279 OR10K1Q8NGX5 313 aa11.04□□□□□ -0.64
PTPN7-202ENST00000367279 VN1R1Q9GZP7 353 aa11.04□□□□□ -0.64
PTPN7-202ENST00000367279 TAS2R3Q9NYW6 316 aa11.04□□□□□ -0.64
PTPN7-202ENST00000367279 TMEM131Q92545 1883 aa11.04□□□□□ -0.64
PTPN7-202ENST00000367279 IGKV1D-43A0A0B4J1Z2 117 aa11.04□□□□□ -0.64
PTPN7-202ENST00000367279 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.04□□□□□ -0.64
PTPN7-202ENST00000367279 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.04□□□□□ -0.64
PTPN7-202ENST00000367279 DISC1C4P0D8 188 aa11.04□□□□□ -0.64
PTPN7-202ENST00000367279 PLATP00750 562 aa11.04□□□□□ -0.64
PTPN7-202ENST00000367279 IFNA6P05013 189 aa11.04□□□□□ -0.64
PTPN7-202ENST00000367279 AVPR2P30518 371 aa11.04□□□□□ -0.64
PTPN7-202ENST00000367279 SCAND1P57086 179 aa11.04□□□□□ -0.64
PTPN7-202ENST00000367279 ZNF75AQ96N20 296 aa11.04□□□□□ -0.64
PTPN7-202ENST00000367279 DUSP15Q9H1R2 295 aaPredicted RBP11.04□□□□□ -0.64
PTPN7-202ENST00000367279 SUSD2Q9UGT4 822 aa11.04□□□□□ -0.64
PTPN7-202ENST00000367279 C5orf51A6NDU8 294 aa11.04□□□□□ -0.64
PTPN7-202ENST00000367279 TUBAL3A6NHL2 446 aa11.04□□□□□ -0.64
PTPN7-202ENST00000367279 LILRA5A6NI73 299 aa11.04□□□□□ -0.64
PTPN7-202ENST00000367279 RFPL4AA6NLU0 287 aa11.04□□□□□ -0.64
PTPN7-202ENST00000367279 RFPL4AL1F8VTS6 287 aa11.04□□□□□ -0.64
PTPN7-202ENST00000367279 TSPAN9O75954 239 aa11.04□□□□□ -0.64
PTPN7-202ENST00000367279 ITGB2P05107 769 aa11.04□□□□□ -0.64
PTPN7-202ENST00000367279 NME1P15531 152 aaKnown RBP11.04□□□□□ -0.64
PTPN7-202ENST00000367279 GNB3P16520 340 aa11.04□□□□□ -0.64
PTPN7-202ENST00000367279 MECP2P51608 486 aaKnown RBP11.04□□□□□ -0.64
PTPN7-202ENST00000367279 DCAF7P61962 342 aa11.04□□□□□ -0.64
PTPN7-202ENST00000367279 HSD11B2P80365 405 aa11.04□□□□□ -0.64
PTPN7-202ENST00000367279 TEX30Q5JUR7 227 aa11.04□□□□□ -0.64
PTPN7-202ENST00000367279 COX15Q7KZN9 410 aa11.04□□□□□ -0.64
PTPN7-202ENST00000367279 SLC51BQ86UW2 128 aa11.04□□□□□ -0.64
PTPN7-202ENST00000367279 TMEM229BQ8NBD8 167 aa11.04□□□□□ -0.64
PTPN7-202ENST00000367279 SLC25A28Q96A46 364 aa11.04□□□□□ -0.64
PTPN7-202ENST00000367279 VRK1Q99986 396 aaPredicted RBP11.04□□□□□ -0.64
PTPN7-202ENST00000367279 CDK2AP1O14519 115 aa11.03□□□□□ -0.64
PTPN7-202ENST00000367279 SYT7O43581 403 aa11.03□□□□□ -0.64
PTPN7-202ENST00000367279 OR2T1O43869 369 aa11.03□□□□□ -0.64
PTPN7-202ENST00000367279 DLSTP36957 453 aa11.03□□□□□ -0.64
PTPN7-202ENST00000367279 CAPZA1P52907 286 aa11.03□□□□□ -0.64
PTPN7-202ENST00000367279 COL13A1Q5TAT6 717 aaPredicted RBP11.03□□□□□ -0.64
PTPN7-202ENST00000367279 OR52N4Q8NGI2 321 aa11.03□□□□□ -0.64
PTPN7-202ENST00000367279 OR1N1Q8NGS0 311 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms