RNA–Protein interactions for RNA: ENST00000367253.8

SYNE1-206, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 5,189 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-206ENST00000367253 MICAL3Q7RTP6 2002 aa7.92□□□□□ -1.14
SYNE1-206ENST00000367253 ZNF582Q96NG8 517 aaPredicted RBP7.92□□□□□ -1.14
SYNE1-206ENST00000367253 RNF2Q99496 336 aa7.92□□□□□ -1.14
SYNE1-206ENST00000367253 DDA1Q9BW61 102 aa7.92□□□□□ -1.14
SYNE1-206ENST00000367253 CRISPLD2Q9H0B8 497 aa7.92□□□□□ -1.14
SYNE1-206ENST00000367253 ACOXLQ9NUZ1 547 aa7.92□□□□□ -1.14
SYNE1-206ENST00000367253 C1RLQ9NZP8 487 aa7.92□□□□□ -1.14
SYNE1-206ENST00000367253 TESQ9UGI8 421 aaKnown RBP7.92□□□□□ -1.14
SYNE1-206ENST00000367253 BET1O15155 118 aa7.91□□□□□ -1.14
SYNE1-206ENST00000367253 P2RX6O15547 441 aa7.91□□□□□ -1.14
SYNE1-206ENST00000367253 C6orf47O95873 294 aa7.91□□□□□ -1.14
SYNE1-206ENST00000367253 EXOSC2Q13868 293 aaKnown RBP7.91□□□□□ -1.14
SYNE1-206ENST00000367253 CEACAM7Q14002 265 aa7.91□□□□□ -1.14
SYNE1-206ENST00000367253 ZNF273Q14593 569 aa7.91□□□□□ -1.14
SYNE1-206ENST00000367253 PROX2Q3B8N5 592 aa7.91□□□□□ -1.14
SYNE1-206ENST00000367253 GGNBP1Q5YKI7 109 aa7.91□□□□□ -1.14
SYNE1-206ENST00000367253 RGS7BPQ6MZT1 257 aaPredicted RBP7.91□□□□□ -1.14
SYNE1-206ENST00000367253 MRGPRGQ86SM5 289 aa7.91□□□□□ -1.14
SYNE1-206ENST00000367253 GABRG1Q8N1C3 465 aa7.91□□□□□ -1.14
SYNE1-206ENST00000367253 OLIG1Q8TAK6 271 aa7.91□□□□□ -1.14
SYNE1-206ENST00000367253 SLC35B2Q8TB61 432 aa7.91□□□□□ -1.14
SYNE1-206ENST00000367253 GATA6Q92908 595 aa7.91□□□□□ -1.14
SYNE1-206ENST00000367253 NICN1Q9BSH3 213 aa7.91□□□□□ -1.14
SYNE1-206ENST00000367253 CHRDL1Q9BU40 450 aa7.91□□□□□ -1.14
SYNE1-206ENST00000367253 ALG8Q9BVK2 526 aa7.91□□□□□ -1.14
SYNE1-206ENST00000367253 METTL17Q9H7H0 456 aaPredicted RBP7.91□□□□□ -1.14
SYNE1-206ENST00000367253 IL26Q9NPH9 171 aa7.91□□□□□ -1.14
SYNE1-206ENST00000367253 WSB2Q9NYS7 404 aaPredicted RBP7.91□□□□□ -1.14
SYNE1-206ENST00000367253 TNFSF12-TNFSF13A0A0A6YY99 330 aa7.91□□□□□ -1.14
SYNE1-206ENST00000367253 RHCEP18577 417 aa7.91□□□□□ -1.14
SYNE1-206ENST00000367253 HTR5AP47898 357 aa7.91□□□□□ -1.14
SYNE1-206ENST00000367253 ATP5J2P56134 94 aa7.91□□□□□ -1.14
SYNE1-206ENST00000367253 TBPL1P62380 186 aa7.91□□□□□ -1.14
SYNE1-206ENST00000367253 SYPL2Q5VXT5 272 aa7.91□□□□□ -1.14
SYNE1-206ENST00000367253 ACSM5Q6NUN0 579 aa7.91□□□□□ -1.14
SYNE1-206ENST00000367253 TMEM81Q6P7N7 255 aa7.91□□□□□ -1.14
SYNE1-206ENST00000367253 OR5M1Q8NGP8 315 aa7.91□□□□□ -1.14
SYNE1-206ENST00000367253 OR2T11Q8NH01 316 aa7.91□□□□□ -1.14
SYNE1-206ENST00000367253 WBP2Q969T9 261 aa7.91□□□□□ -1.14
SYNE1-206ENST00000367253 MARC2Q969Z3 335 aa7.91□□□□□ -1.14
SYNE1-206ENST00000367253 INTS14Q96SY0 518 aa7.91□□□□□ -1.14
SYNE1-206ENST00000367253 STACQ99469 402 aa7.91□□□□□ -1.14
SYNE1-206ENST00000367253 SLC25A18Q9H1K4 315 aa7.91□□□□□ -1.14
SYNE1-206ENST00000367253 DHCR7Q9UBM7 475 aaKnown RBP7.91□□□□□ -1.14
SYNE1-206ENST00000367253 COX11Q9Y6N1 276 aa7.91□□□□□ -1.14
SYNE1-206ENST00000367253 DBX1A6NMT0 343 aa7.91□□□□□ -1.14
SYNE1-206ENST00000367253 FABP7O15540 132 aa7.91□□□□□ -1.14
SYNE1-206ENST00000367253 HAND1O96004 215 aa7.91□□□□□ -1.14
SYNE1-206ENST00000367253 ARG1P05089 322 aa7.91□□□□□ -1.14
SYNE1-206ENST00000367253 KITLGP21583 273 aa7.91□□□□□ -1.14
SYNE1-206ENST00000367253 CD80P33681 288 aa7.91□□□□□ -1.14
SYNE1-206ENST00000367253 WNT4P56705 351 aa7.91□□□□□ -1.14
SYNE1-206ENST00000367253 PCLAFQ15004 111 aa7.91□□□□□ -1.14
SYNE1-206ENST00000367253 OR1C1Q15619 314 aa7.91□□□□□ -1.14
SYNE1-206ENST00000367253 ZNF648Q5T619 568 aaPredicted RBP7.91□□□□□ -1.14
SYNE1-206ENST00000367253 NADSYN1Q6IA69 706 aa7.91□□□□□ -1.14
SYNE1-206ENST00000367253 SFXN4Q6P4A7 337 aa7.91□□□□□ -1.14
SYNE1-206ENST00000367253 KCTD12Q96CX2 325 aaKnown RBP7.91□□□□□ -1.14
SYNE1-206ENST00000367253 XYLT2Q9H1B5 865 aa7.91□□□□□ -1.14
SYNE1-206ENST00000367253 C12orf49Q9H741 205 aa7.91□□□□□ -1.14
SYNE1-206ENST00000367253 MTHFD2LQ9H903 347 aaPredicted RBP7.91□□□□□ -1.14
SYNE1-206ENST00000367253 DNAJC4Q9NNZ3 241 aa7.91□□□□□ -1.14
SYNE1-206ENST00000367253 GPR173Q9NS66 373 aa7.91□□□□□ -1.14
SYNE1-206ENST00000367253 P4HTMQ9NXG6 502 aa7.91□□□□□ -1.14
SYNE1-206ENST00000367253 ARL2-SNX15V9GYD0 113 aa7.91□□□□□ -1.14
SYNE1-206ENST00000367253 MARCH11A6NNE9 402 aa7.91□□□□□ -1.14
SYNE1-206ENST00000367253 CXorf49A8MYA2 514 aaPredicted RBP7.91□□□□□ -1.14
SYNE1-206ENST00000367253 SGK494L7N484 410 aa7.91□□□□□ -1.14
SYNE1-206ENST00000367253 OSMP13725 252 aa7.91□□□□□ -1.14
SYNE1-206ENST00000367253 KCNJ3P48549 501 aa7.91□□□□□ -1.14
SYNE1-206ENST00000367253 SMAGPQ0VAQ4 97 aa7.91□□□□□ -1.14
SYNE1-206ENST00000367253 TMEM183BQ1AE95 376 aa7.91□□□□□ -1.14
SYNE1-206ENST00000367253 ADAMTSL4Q6UY14 1074 aa7.91□□□□□ -1.14
SYNE1-206ENST00000367253 CHST14Q8NCH0 376 aa7.91□□□□□ -1.14
SYNE1-206ENST00000367253 OR6T1Q8NGN1 323 aa7.91□□□□□ -1.14
SYNE1-206ENST00000367253 DNASE2BQ8WZ79 361 aa7.91□□□□□ -1.14
SYNE1-206ENST00000367253 ZNF516Q92618 1163 aa7.91□□□□□ -1.14
SYNE1-206ENST00000367253 DUS3LQ96G46 650 aaKnown RBP7.91□□□□□ -1.14
SYNE1-206ENST00000367253 MS4A4EQ96PG1 132 aa7.91□□□□□ -1.14
SYNE1-206ENST00000367253 RSPO3Q9BXY4 272 aaPredicted RBP7.91□□□□□ -1.14
SYNE1-206ENST00000367253 SH3BGRL3Q9H299 93 aa7.91□□□□□ -1.14
SYNE1-206ENST00000367253 POPDC3Q9HBV1 291 aa7.91□□□□□ -1.14
SYNE1-206ENST00000367253 DTLQ9NZJ0 730 aa7.91□□□□□ -1.14
SYNE1-206ENST00000367253 LAMB1P07942 1786 aa7.91□□□□□ -1.14
SYNE1-206ENST00000367253 LILRA5A6NI73 299 aa7.9□□□□□ -1.14
SYNE1-206ENST00000367253 LOC730098B7Z3J9 87 aa7.9□□□□□ -1.14
SYNE1-206ENST00000367253 BMPR1BO00238 502 aa7.9□□□□□ -1.14
SYNE1-206ENST00000367253 AQP8O94778 261 aa7.9□□□□□ -1.14
SYNE1-206ENST00000367253 SPI1P17947 270 aa7.9□□□□□ -1.14
SYNE1-206ENST00000367253 EPHA2P29317 976 aa7.9□□□□□ -1.14
SYNE1-206ENST00000367253 GIPRP48546 466 aa7.9□□□□□ -1.14
SYNE1-206ENST00000367253 FXYD4P59646 89 aa7.9□□□□□ -1.14
SYNE1-206ENST00000367253 DNAJB13P59910 316 aa7.9□□□□□ -1.14
SYNE1-206ENST00000367253 CCL7P80098 99 aa7.9□□□□□ -1.14
SYNE1-206ENST00000367253 SLAQ13239 276 aa7.9□□□□□ -1.14
SYNE1-206ENST00000367253 OR7A5Q15622 319 aa7.9□□□□□ -1.14
SYNE1-206ENST00000367253 RTL6Q6ICC9 239 aa7.9□□□□□ -1.14
SYNE1-206ENST00000367253 CPEB2Q7Z5Q1 589 aaKnown RBP7.9□□□□□ -1.14
SYNE1-206ENST00000367253 STT3BQ8TCJ2 826 aa7.9□□□□□ -1.14
SYNE1-206ENST00000367253 LMF1Q96S06 567 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms