RNA–Protein interactions for RNA: ENST00000366896.5

PRKN-204, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,514 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-204ENST00000366896 TCEAL6Q6IPX3 200 aa13.22□□□□□ -0.29
PRKN-204ENST00000366896 TMEM88Q6PEY1 159 aa13.22□□□□□ -0.29
PRKN-204ENST00000366896 HAGHLQ6PII5 290 aaPredicted RBP13.22□□□□□ -0.29
PRKN-204ENST00000366896 SVBPQ8N300 66 aa13.22□□□□□ -0.29
PRKN-204ENST00000366896 SUMF1Q8NBK3 374 aa13.22□□□□□ -0.29
PRKN-204ENST00000366896 PHOSPHO1Q8TCT1 267 aa13.22□□□□□ -0.29
PRKN-204ENST00000366896 CCDC107Q8WV48 283 aa13.22□□□□□ -0.29
PRKN-204ENST00000366896 TCEAL3Q969E4 200 aa13.22□□□□□ -0.29
PRKN-204ENST00000366896 KTI12Q96EK9 354 aaPredicted RBP13.22□□□□□ -0.29
PRKN-204ENST00000366896 TCTN2Q96GX1 697 aa13.22□□□□□ -0.29
PRKN-204ENST00000366896 ZNF75AQ96N20 296 aa13.22□□□□□ -0.29
PRKN-204ENST00000366896 TSPAN32Q96QS1 320 aa13.22□□□□□ -0.29
PRKN-204ENST00000366896 PRRX2Q99811 253 aa13.22□□□□□ -0.29
PRKN-204ENST00000366896 ADAM19Q9H013 955 aa13.22□□□□□ -0.29
PRKN-204ENST00000366896 POFUT1Q9H488 388 aa13.22□□□□□ -0.29
PRKN-204ENST00000366896 GPN3Q9UHW5 284 aaPredicted RBP13.22□□□□□ -0.29
PRKN-204ENST00000366896 MYO15AQ9UKN7 3530 aa13.22□□□□□ -0.29
PRKN-204ENST00000366896 ARID1BQ8NFD5 2236 aaPredicted RBP13.21□□□□□ -0.29
PRKN-204ENST00000366896 PRSS44E7EML9 344 aa13.21□□□□□ -0.29
PRKN-204ENST00000366896 ZNF264O43296 627 aa13.21□□□□□ -0.29
PRKN-204ENST00000366896 CTAG2O75638 210 aa13.21□□□□□ -0.29
PRKN-204ENST00000366896 CD3DP04234 171 aa13.21□□□□□ -0.29
PRKN-204ENST00000366896 OR4E1P0C645 316 aa13.21□□□□□ -0.29
PRKN-204ENST00000366896 PPICP45877 212 aa13.21□□□□□ -0.29
PRKN-204ENST00000366896 RPL18Q07020 188 aaKnown RBP13.21□□□□□ -0.29
PRKN-204ENST00000366896 SRSF4Q08170 494 aaKnown RBP13.21□□□□□ -0.29
PRKN-204ENST00000366896 C14orf28Q4W4Y0 310 aa13.21□□□□□ -0.29
PRKN-204ENST00000366896 PAN3Q58A45 887 aaKnown RBP13.21□□□□□ -0.29
PRKN-204ENST00000366896 NKAIN2Q5VXU1 208 aa13.21□□□□□ -0.29
PRKN-204ENST00000366896 GLT8D1Q68CQ7 371 aa13.21□□□□□ -0.29
PRKN-204ENST00000366896 LRRC69Q6ZNQ3 347 aa13.21□□□□□ -0.29
PRKN-204ENST00000366896 LURAP1LQ8IV03 231 aa13.21□□□□□ -0.29
PRKN-204ENST00000366896 CLEC1AQ8NC01 280 aa13.21□□□□□ -0.29
PRKN-204ENST00000366896 OR6N2Q8NGY6 317 aa13.21□□□□□ -0.29
PRKN-204ENST00000366896 C4orf45Q96LM5 186 aa13.21□□□□□ -0.29
PRKN-204ENST00000366896 AMELYQ99218 206 aa13.21□□□□□ -0.29
PRKN-204ENST00000366896 KCNK15Q9H427 330 aa13.21□□□□□ -0.29
PRKN-204ENST00000366896 GPR179Q6PRD1 2367 aa13.21□□□□□ -0.29
PRKN-204ENST00000366896 A0A1B0GTI1 187 aa13.21□□□□□ -0.29
PRKN-204ENST00000366896 OR5H14A6NHG9 310 aa13.21□□□□□ -0.29
PRKN-204ENST00000366896 C17orf51A8MQB3 221 aa13.21□□□□□ -0.29
PRKN-204ENST00000366896 SCDO00767 359 aa13.21□□□□□ -0.29
PRKN-204ENST00000366896 SLC6A8P48029 635 aa13.21□□□□□ -0.29
PRKN-204ENST00000366896 GPR85P60893 370 aa13.21□□□□□ -0.29
PRKN-204ENST00000366896 STEAP1BQ6NZ63 245 aa13.21□□□□□ -0.29
PRKN-204ENST00000366896 ARMC10Q8N2F6 343 aa13.21□□□□□ -0.29
PRKN-204ENST00000366896 ZNF676Q8N7Q3 588 aa13.21□□□□□ -0.29
PRKN-204ENST00000366896 STEAP2Q8NFT2 490 aa13.21□□□□□ -0.29
PRKN-204ENST00000366896 TMEM106AQ96A25 262 aa13.21□□□□□ -0.29
PRKN-204ENST00000366896 INTS14Q96SY0 518 aa13.21□□□□□ -0.29
PRKN-204ENST00000366896 LAT2Q9GZY6 243 aa13.21□□□□□ -0.29
PRKN-204ENST00000366896 ZNF768Q9H5H4 540 aaKnown RBP13.21□□□□□ -0.29
PRKN-204ENST00000366896 BIN3Q9NQY0 253 aa13.21□□□□□ -0.29
PRKN-204ENST00000366896 CTSFQ9UBX1 484 aa13.21□□□□□ -0.29
PRKN-204ENST00000366896 MEIS3P1A6NDR6 274 aa13.2□□□□□ -0.3
PRKN-204ENST00000366896 APOC1P02654 83 aa13.2□□□□□ -0.3
PRKN-204ENST00000366896 CD37P11049 281 aa13.2□□□□□ -0.3
PRKN-204ENST00000366896 SLC25A4P12235 298 aa13.2□□□□□ -0.3
PRKN-204ENST00000366896 HPGDP15428 266 aa13.2□□□□□ -0.3
PRKN-204ENST00000366896 EFNB2P52799 333 aa13.2□□□□□ -0.3
PRKN-204ENST00000366896 SNTB1Q13884 538 aaKnown RBP13.2□□□□□ -0.3
PRKN-204ENST00000366896 DPY19L4Q7Z388 723 aa13.2□□□□□ -0.3
PRKN-204ENST00000366896 PRSS35Q8N3Z0 413 aa13.2□□□□□ -0.3
PRKN-204ENST00000366896 OR5M8Q8NGP6 311 aa13.2□□□□□ -0.3
PRKN-204ENST00000366896 OTOSQ8NHW6 89 aa13.2□□□□□ -0.3
PRKN-204ENST00000366896 ASB17Q8WXJ9 295 aa13.2□□□□□ -0.3
PRKN-204ENST00000366896 MMABQ96EY8 250 aaPredicted RBP13.2□□□□□ -0.3
PRKN-204ENST00000366896 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.2□□□□□ -0.3
PRKN-204ENST00000366896 UCK1Q9HA47 277 aa13.2□□□□□ -0.3
PRKN-204ENST00000366896 UPB1Q9UBR1 384 aa13.2□□□□□ -0.3
PRKN-204ENST00000366896 PCDHB10Q9UN67 800 aa13.2□□□□□ -0.3
PRKN-204ENST00000366896 H0YIG0 161 aa13.2□□□□□ -0.3
PRKN-204ENST00000366896 SULT1C2O00338 296 aa13.2□□□□□ -0.3
PRKN-204ENST00000366896 ADCYAP1P18509 176 aa13.2□□□□□ -0.3
PRKN-204ENST00000366896 PVALBP20472 110 aaPredicted RBP13.2□□□□□ -0.3
PRKN-204ENST00000366896 RFC3P40938 356 aa13.2□□□□□ -0.3
PRKN-204ENST00000366896 MEOX2P50222 304 aa13.2□□□□□ -0.3
PRKN-204ENST00000366896 GUCA2BQ16661 112 aa13.2□□□□□ -0.3
PRKN-204ENST00000366896 DHRS7BQ6IAN0 325 aaPredicted RBP13.2□□□□□ -0.3
PRKN-204ENST00000366896 FAM166AQ6J272 317 aa13.2□□□□□ -0.3
PRKN-204ENST00000366896 BIVMQ86UB2 503 aa13.2□□□□□ -0.3
PRKN-204ENST00000366896 OR1S2Q8NGQ3 325 aa13.2□□□□□ -0.3
PRKN-204ENST00000366896 DVL3Q92997 716 aaPredicted RBP13.2□□□□□ -0.3
PRKN-204ENST00000366896 SLC46A1Q96NT5 459 aa13.2□□□□□ -0.3
PRKN-204ENST00000366896 MAP3K3Q99759 626 aa13.2□□□□□ -0.3
PRKN-204ENST00000366896 NKX3-1Q99801 234 aaPredicted RBP13.2□□□□□ -0.3
PRKN-204ENST00000366896 VRK1Q99986 396 aaPredicted RBP13.2□□□□□ -0.3
PRKN-204ENST00000366896 ZNF471Q9BX82 626 aaPredicted RBP13.2□□□□□ -0.3
PRKN-204ENST00000366896 RTN4RQ9BZR6 473 aa13.2□□□□□ -0.3
PRKN-204ENST00000366896 EPHA6Q9UF33 1036 aa13.2□□□□□ -0.3
PRKN-204ENST00000366896 RALGAPA1Q6GYQ0 2036 aa13.2□□□□□ -0.3
PRKN-204ENST00000366896 TRAV18A0A075B6X5 111 aa13.19□□□□□ -0.3
PRKN-204ENST00000366896 TMEM82A0PJX8 343 aa13.19□□□□□ -0.3
PRKN-204ENST00000366896 RNF222A6NCQ9 220 aa13.19□□□□□ -0.3
PRKN-204ENST00000366896 LINC01387J3KSC0 135 aa13.19□□□□□ -0.3
PRKN-204ENST00000366896 SLC25A12O75746 678 aa13.19□□□□□ -0.3
PRKN-204ENST00000366896 NAT2P11245 290 aa13.19□□□□□ -0.3
PRKN-204ENST00000366896 BDKRB2P30411 391 aa13.19□□□□□ -0.3
PRKN-204ENST00000366896 PRSS3P35030 304 aa13.19□□□□□ -0.3
PRKN-204ENST00000366896 GABRA4P48169 554 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms