RNA–Protein interactions for RNA: ENST00000364739.1

RNU4-28P-201, Transcript of RNA, U4 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU4-28P, Length 141 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-28P-201ENST00000364739 HCAR3P49019 387 aa1.88□□□□□ -2.11
RNU4-28P-201ENST00000364739 SSR4P51571 173 aa1.88□□□□□ -2.11
RNU4-28P-201ENST00000364739 FUT5Q11128 374 aa1.88□□□□□ -2.11
RNU4-28P-201ENST00000364739 AVPI1Q5T686 147 aa1.88□□□□□ -2.11
RNU4-28P-201ENST00000364739 BHLHE23Q8NDY6 225 aa1.88□□□□□ -2.11
RNU4-28P-201ENST00000364739 C1orf64Q8NEQ6 169 aa1.88□□□□□ -2.11
RNU4-28P-201ENST00000364739 SEH1LQ96EE3 360 aa1.88□□□□□ -2.11
RNU4-28P-201ENST00000364739 DUS3LQ96G46 650 aaKnown RBP1.88□□□□□ -2.11
RNU4-28P-201ENST00000364739 TMEM9BQ9NQ34 198 aa1.88□□□□□ -2.11
RNU4-28P-201ENST00000364739 BAZ2AQ9UIF9 1905 aaKnown RBP1.87□□□□□ -2.11
RNU4-28P-201ENST00000364739 TRAV19A0A0A6YYK7 116 aa1.87□□□□□ -2.11
RNU4-28P-201ENST00000364739 GLYATL1P3A0A0U1RQE8 302 aa1.87□□□□□ -2.11
RNU4-28P-201ENST00000364739 CLRN2A0PK11 232 aa1.87□□□□□ -2.11
RNU4-28P-201ENST00000364739 CDC7O00311 574 aa1.87□□□□□ -2.11
RNU4-28P-201ENST00000364739 CHST10O43529 356 aa1.87□□□□□ -2.11
RNU4-28P-201ENST00000364739 SURF6O75683 361 aaKnown RBP1.87□□□□□ -2.11
RNU4-28P-201ENST00000364739 PABPC4LP0CB38 370 aaKnown RBP1.87□□□□□ -2.11
RNU4-28P-201ENST00000364739 RAB3AP20336 220 aa1.87□□□□□ -2.11
RNU4-28P-201ENST00000364739 P2RX1P51575 399 aa1.87□□□□□ -2.11
RNU4-28P-201ENST00000364739 VSX2P58304 361 aaPredicted RBP1.87□□□□□ -2.11
RNU4-28P-201ENST00000364739 RPS11P62280 158 aaKnown RBP eCLIP1.87□□□□□ -2.11
RNU4-28P-201ENST00000364739 FLI1Q01543 452 aaPredicted RBP1.87□□□□□ -2.11
RNU4-28P-201ENST00000364739 GUSBP11Q6P575 273 aa1.87□□□□□ -2.11
RNU4-28P-201ENST00000364739 SPINT4Q6UDR6 99 aa1.87□□□□□ -2.11
RNU4-28P-201ENST00000364739 UBE2Q2Q8WVN8 375 aa1.87□□□□□ -2.11
RNU4-28P-201ENST00000364739 GALNT14Q96FL9 552 aa1.87□□□□□ -2.11
RNU4-28P-201ENST00000364739 ATP5SQ99766 215 aa1.87□□□□□ -2.11
RNU4-28P-201ENST00000364739 SLC39A3Q9BRY0 314 aa1.87□□□□□ -2.11
RNU4-28P-201ENST00000364739 GGTLC1Q9BX51 225 aa1.87□□□□□ -2.11
RNU4-28P-201ENST00000364739 IKZF2Q9UKS7 526 aa1.87□□□□□ -2.11
RNU4-28P-201ENST00000364739 BLOC1S6Q9UL45 172 aa1.87□□□□□ -2.11
RNU4-28P-201ENST00000364739 ATP6V0A2Q9Y487 856 aa1.87□□□□□ -2.11
RNU4-28P-201ENST00000364739 MMACHCQ9Y4U1 282 aa1.87□□□□□ -2.11
RNU4-28P-201ENST00000364739 ARHGEF35A5YM69 484 aa1.86□□□□□ -2.11
RNU4-28P-201ENST00000364739 CTSLP07711 333 aa1.86□□□□□ -2.11
RNU4-28P-201ENST00000364739 GGT1P19440 569 aa1.86□□□□□ -2.11
RNU4-28P-201ENST00000364739 CSNK1EP49674 416 aaKnown RBP1.86□□□□□ -2.11
RNU4-28P-201ENST00000364739 CCNHP51946 323 aaPredicted RBP1.86□□□□□ -2.11
RNU4-28P-201ENST00000364739 PLP1P60201 277 aa1.86□□□□□ -2.11
RNU4-28P-201ENST00000364739 IL24Q13007 206 aa1.86□□□□□ -2.11
RNU4-28P-201ENST00000364739 GPM6BQ13491 265 aa1.86□□□□□ -2.11
RNU4-28P-201ENST00000364739 TCEAL5Q5H9L2 206 aa1.86□□□□□ -2.11
RNU4-28P-201ENST00000364739 SPANXA2-OT1Q8N9U9 137 aa1.86□□□□□ -2.11
RNU4-28P-201ENST00000364739 TCEAL3Q969E4 200 aa1.86□□□□□ -2.11
RNU4-28P-201ENST00000364739 WDR34Q96EX3 536 aa1.86□□□□□ -2.11
RNU4-28P-201ENST00000364739 C21orf62Q9NYP8 219 aa1.86□□□□□ -2.11
RNU4-28P-201ENST00000364739 CRCT1Q9UGL9 99 aa1.86□□□□□ -2.11
RNU4-28P-201ENST00000364739 VANGL2Q9ULK5 521 aa1.86□□□□□ -2.11
RNU4-28P-201ENST00000364739 SIGLEC7Q9Y286 467 aa1.86□□□□□ -2.11
RNU4-28P-201ENST00000364739 PLXNB1O43157 2135 aa1.85□□□□□ -2.11
RNU4-28P-201ENST00000364739 IGKV1-8A0A0C4DH67 115 aa1.85□□□□□ -2.11
RNU4-28P-201ENST00000364739 SERPINA5P05154 406 aa1.85□□□□□ -2.11
RNU4-28P-201ENST00000364739 CD37P11049 281 aa1.85□□□□□ -2.11
RNU4-28P-201ENST00000364739 TGM3Q08188 693 aa1.85□□□□□ -2.11
RNU4-28P-201ENST00000364739 CTSL3PQ5NE16 218 aa1.85□□□□□ -2.11
RNU4-28P-201ENST00000364739 TMEM136Q6ZRR5 245 aa1.85□□□□□ -2.11
RNU4-28P-201ENST00000364739 Q6ZSR3 168 aa1.85□□□□□ -2.11
RNU4-28P-201ENST00000364739 EGFL6Q8IUX8 553 aa1.85□□□□□ -2.11
RNU4-28P-201ENST00000364739 COX18Q8N8Q8 333 aa1.85□□□□□ -2.11
RNU4-28P-201ENST00000364739 APCDD1LQ8NCL9 501 aa1.85□□□□□ -2.11
RNU4-28P-201ENST00000364739 FBXL13Q8NEE6 735 aa1.85□□□□□ -2.11
RNU4-28P-201ENST00000364739 B3GNT7Q8NFL0 401 aa1.85□□□□□ -2.11
RNU4-28P-201ENST00000364739 RHOXF2Q9BQY4 288 aa1.85□□□□□ -2.11
RNU4-28P-201ENST00000364739 EXOSC4Q9NPD3 245 aaKnown RBP1.85□□□□□ -2.11
RNU4-28P-201ENST00000364739 ETNK2Q9NVF9 386 aa1.85□□□□□ -2.11
RNU4-28P-201ENST00000364739 SUN2Q9UH99 717 aa1.85□□□□□ -2.11
RNU4-28P-201ENST00000364739 NUP50Q9UKX7 468 aa1.85□□□□□ -2.11
RNU4-28P-201ENST00000364739 OTOGLQ3ZCN5 2332 aa1.85□□□□□ -2.11
RNU4-28P-201ENST00000364739 GABRR3A8MPY1 467 aa1.84□□□□□ -2.11
RNU4-28P-201ENST00000364739 C17orf51A8MQB3 221 aa1.84□□□□□ -2.11
RNU4-28P-201ENST00000364739 NDUFC2-KCTD14E9PQ53 114 aa1.84□□□□□ -2.11
RNU4-28P-201ENST00000364739 NVLO15381 856 aaKnown RBP1.84□□□□□ -2.11
RNU4-28P-201ENST00000364739 TSPAN13O95857 204 aa1.84□□□□□ -2.11
RNU4-28P-201ENST00000364739 LGALS3P17931 250 aaKnown RBP1.84□□□□□ -2.11
RNU4-28P-201ENST00000364739 TNFSF9P41273 254 aa1.84□□□□□ -2.11
RNU4-28P-201ENST00000364739 PPP1CBP62140 327 aa1.84□□□□□ -2.11
RNU4-28P-201ENST00000364739 OR7A5Q15622 319 aa1.84□□□□□ -2.11
RNU4-28P-201ENST00000364739 GPR107Q5VW38 600 aa1.84□□□□□ -2.11
RNU4-28P-201ENST00000364739 NKAIN4Q8IVV8 208 aa1.84□□□□□ -2.11
RNU4-28P-201ENST00000364739 ZNF101Q8IZC7 436 aa1.84□□□□□ -2.11
RNU4-28P-201ENST00000364739 PRELID2Q8N945 189 aa1.84□□□□□ -2.11
RNU4-28P-201ENST00000364739 EIF1ADQ8N9N8 165 aaKnown RBP1.84□□□□□ -2.11
RNU4-28P-201ENST00000364739 ZNF680Q8NEM1 530 aa1.84□□□□□ -2.11
RNU4-28P-201ENST00000364739 CCDC126Q96EE4 140 aa1.84□□□□□ -2.11
RNU4-28P-201ENST00000364739 IP6K3Q96PC2 410 aa1.84□□□□□ -2.11
RNU4-28P-201ENST00000364739 RSG1Q9BU20 258 aa1.84□□□□□ -2.11
RNU4-28P-201ENST00000364739 FRMD8P1Q9BZ68 369 aaPredicted RBP1.84□□□□□ -2.11
RNU4-28P-201ENST00000364739 ISY1Q9ULR0 285 aaKnown RBP1.84□□□□□ -2.11
RNU4-28P-201ENST00000364739 KCNE3Q9Y6H6 103 aa1.84□□□□□ -2.11
RNU4-28P-201ENST00000364739 A0A1B0GW55 424 aa1.83□□□□□ -2.12
RNU4-28P-201ENST00000364739 BICDL2A1A5D9 508 aa1.83□□□□□ -2.12
RNU4-28P-201ENST00000364739 LRRIQ3A6PVS8 624 aaPredicted RBP1.83□□□□□ -2.12
RNU4-28P-201ENST00000364739 KRBOX1C9JBD0 128 aa1.83□□□□□ -2.12
RNU4-28P-201ENST00000364739 H7C417 338 aa1.83□□□□□ -2.12
RNU4-28P-201ENST00000364739 SLC22A5O76082 557 aa1.83□□□□□ -2.12
RNU4-28P-201ENST00000364739 NDUFB10O96000 172 aa1.83□□□□□ -2.12
RNU4-28P-201ENST00000364739 CYB5R3P00387 301 aaPredicted RBP1.83□□□□□ -2.12
RNU4-28P-201ENST00000364739 DUX4L2P0CJ85 424 aa1.83□□□□□ -2.12
RNU4-28P-201ENST00000364739 DUX4L3P0CJ86 424 aa1.83□□□□□ -2.12
RNU4-28P-201ENST00000364739 DUX4L5P0CJ88 424 aa1.83□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms