RNA–Protein interactions for RNA: ENST00000361138.6

SMC5-201, Transcript of structural maintenance of chromosomes 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC5, Length 5,980 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-201ENST00000361138 LPAR4Q99677 370 aa12.7□□□□□ -0.38
SMC5-201ENST00000361138 A0A087WV62 115 aa12.7□□□□□ -0.38
SMC5-201ENST00000361138 DDAH2O95865 285 aa12.7□□□□□ -0.38
SMC5-201ENST00000361138 HLA-HP01893 362 aa12.7□□□□□ -0.38
SMC5-201ENST00000361138 MT-ND4LP03901 98 aa12.7□□□□□ -0.38
SMC5-201ENST00000361138 PCBP4P57723 403 aaKnown RBP12.7□□□□□ -0.38
SMC5-201ENST00000361138 RIN1Q13671 783 aa12.7□□□□□ -0.38
SMC5-201ENST00000361138 RAB30Q15771 203 aa12.7□□□□□ -0.38
SMC5-201ENST00000361138 SUMF1Q8NBK3 374 aa12.7□□□□□ -0.38
SMC5-201ENST00000361138 CLEC1AQ8NC01 280 aa12.7□□□□□ -0.38
SMC5-201ENST00000361138 OR5L1Q8NGL2 311 aa12.7□□□□□ -0.38
SMC5-201ENST00000361138 OR2G2Q8NGZ5 317 aa12.7□□□□□ -0.38
SMC5-201ENST00000361138 TSSK2Q96PF2 358 aa12.7□□□□□ -0.38
SMC5-201ENST00000361138 TINAGL1Q9GZM7 467 aaPredicted RBP12.7□□□□□ -0.38
SMC5-201ENST00000361138 LY75O60449 1722 aa12.7□□□□□ -0.38
SMC5-201ENST00000361138 C17orf112F2Z3M2 114 aa12.7□□□□□ -0.38
SMC5-201ENST00000361138 TBX19O60806 448 aa12.7□□□□□ -0.38
SMC5-201ENST00000361138 SLC17A1Q14916 467 aa12.7□□□□□ -0.38
SMC5-201ENST00000361138 RTL10Q7L3V2 364 aa12.7□□□□□ -0.38
SMC5-201ENST00000361138 MARCH3Q86UD3 253 aa12.7□□□□□ -0.38
SMC5-201ENST00000361138 MISPQ8IVT2 679 aa12.7□□□□□ -0.38
SMC5-201ENST00000361138 NPAS1Q99742 590 aa12.7□□□□□ -0.38
SMC5-201ENST00000361138 ZNF2Q9BSG1 426 aaPredicted RBP12.7□□□□□ -0.38
SMC5-201ENST00000361138 SERTAD4Q9NUC0 356 aa12.7□□□□□ -0.38
SMC5-201ENST00000361138 SLCO1C1Q9NYB5 712 aa12.7□□□□□ -0.38
SMC5-201ENST00000361138 MTFP1Q9UDX5 166 aa12.7□□□□□ -0.38
SMC5-201ENST00000361138 E5RGE8 158 aa12.7□□□□□ -0.38
SMC5-201ENST00000361138 FFAR1O14842 300 aa12.7□□□□□ -0.38
SMC5-201ENST00000361138 ST8SIA3O43173 380 aa12.7□□□□□ -0.38
SMC5-201ENST00000361138 SLC25A30Q5SVS4 291 aa12.7□□□□□ -0.38
SMC5-201ENST00000361138 ATPAF1Q5TC12 328 aaPredicted RBP12.7□□□□□ -0.38
SMC5-201ENST00000361138 Q6ZNB5 142 aa12.7□□□□□ -0.38
SMC5-201ENST00000361138 USP53Q70EK8 1073 aa12.7□□□□□ -0.38
SMC5-201ENST00000361138 ZFP62Q8NB50 900 aaPredicted RBP12.7□□□□□ -0.38
SMC5-201ENST00000361138 C17orf47Q8NEP4 570 aa12.7□□□□□ -0.38
SMC5-201ENST00000361138 TMPRSS5Q9H3S3 457 aa12.7□□□□□ -0.38
SMC5-201ENST00000361138 PATZ1Q9HBE1 687 aaKnown RBP12.7□□□□□ -0.38
SMC5-201ENST00000361138 OR5V1Q9UGF6 321 aa12.7□□□□□ -0.38
SMC5-201ENST00000361138 NSG2Q9Y328 171 aa12.7□□□□□ -0.38
SMC5-201ENST00000361138 A8MVM7 634 aa12.69□□□□□ -0.38
SMC5-201ENST00000361138 PRAMEF26H0Y7S4 382 aa12.69□□□□□ -0.38
SMC5-201ENST00000361138 CD37P11049 281 aa12.69□□□□□ -0.38
SMC5-201ENST00000361138 PJVKQ0ZLH3 352 aa12.69□□□□□ -0.38
SMC5-201ENST00000361138 C1orf140Q5VVS0 124 aa12.69□□□□□ -0.38
SMC5-201ENST00000361138 SHEQ5VZ18 495 aa12.69□□□□□ -0.38
SMC5-201ENST00000361138 LDAHQ9H6V9 325 aa12.69□□□□□ -0.38
SMC5-201ENST00000361138 IGLV3-16A0A075B6K0 115 aa12.69□□□□□ -0.38
SMC5-201ENST00000361138 OR5AP2Q8NGF4 316 aa12.69□□□□□ -0.38
SMC5-201ENST00000361138 SLC17A5Q9NRA2 495 aa12.69□□□□□ -0.38
SMC5-201ENST00000361138 SLC22A13Q9Y226 551 aa12.69□□□□□ -0.38
SMC5-201ENST00000361138 HTRA4P83105 476 aaPredicted RBP12.69□□□□□ -0.38
SMC5-201ENST00000361138 RPL18Q07020 188 aaKnown RBP12.69□□□□□ -0.38
SMC5-201ENST00000361138 C15orf54Q8N8G6 183 aa12.69□□□□□ -0.38
SMC5-201ENST00000361138 NEU3Q9UQ49 428 aa12.69□□□□□ -0.38
SMC5-201ENST00000361138 R4GMQ9 66 aa12.69□□□□□ -0.38
SMC5-201ENST00000361138 GABRA1P14867 456 aa12.69□□□□□ -0.38
SMC5-201ENST00000361138 PSMB3P49720 205 aa12.69□□□□□ -0.38
SMC5-201ENST00000361138 SLC16A13Q7RTY0 426 aa12.69□□□□□ -0.38
SMC5-201ENST00000361138 LINC00615Q96LM1 132 aaPredicted RBP12.69□□□□□ -0.38
SMC5-201ENST00000361138 WWTR1Q9GZV5 400 aa12.69□□□□□ -0.38
SMC5-201ENST00000361138 KCNG2Q9UJ96 466 aa12.69□□□□□ -0.38
SMC5-201ENST00000361138 FGF17O60258 216 aa12.69□□□□□ -0.38
SMC5-201ENST00000361138 LRP3O75074 770 aa12.69□□□□□ -0.38
SMC5-201ENST00000361138 AVPR2P30518 371 aa12.69□□□□□ -0.38
SMC5-201ENST00000361138 DHPSP49366 369 aaPredicted RBP12.69□□□□□ -0.38
SMC5-201ENST00000361138 AADACL3Q5VUY0 350 aa12.69□□□□□ -0.38
SMC5-201ENST00000361138 ZNF100Q8IYN0 542 aa12.69□□□□□ -0.38
SMC5-201ENST00000361138 SCMH1Q96GD3 660 aa12.69□□□□□ -0.38
SMC5-201ENST00000361138 SCAF4O95104 1147 aaKnown RBP12.68□□□□□ -0.38
SMC5-201ENST00000361138 JMJD7P0C870 316 aa12.68□□□□□ -0.38
SMC5-201ENST00000361138 IL23AQ9NPF7 189 aa12.68□□□□□ -0.38
SMC5-201ENST00000361138 SIGLEC7Q9Y286 467 aa12.68□□□□□ -0.38
SMC5-201ENST00000361138 LSM2Q9Y333 95 aaKnown RBP12.68□□□□□ -0.38
SMC5-201ENST00000361138 TMEM272A0A1B0GTI8 110 aa12.68□□□□□ -0.38
SMC5-201ENST00000361138 SLC17A2O00624 439 aa12.68□□□□□ -0.38
SMC5-201ENST00000361138 MBTPS2O43462 519 aa12.68□□□□□ -0.38
SMC5-201ENST00000361138 LANCL1O43813 399 aa12.68□□□□□ -0.38
SMC5-201ENST00000361138 ERVK-16P61578 105 aa12.68□□□□□ -0.38
SMC5-201ENST00000361138 DEFB103AP81534 67 aa12.68□□□□□ -0.38
SMC5-201ENST00000361138 ZDHHC22Q8N966 263 aa12.68□□□□□ -0.38
SMC5-201ENST00000361138 EMG1Q92979 244 aaKnown RBP12.68□□□□□ -0.38
SMC5-201ENST00000361138 KIRREL1Q96J84 757 aa12.68□□□□□ -0.38
SMC5-201ENST00000361138 NKX3-1Q99801 234 aaPredicted RBP12.68□□□□□ -0.38
SMC5-201ENST00000361138 ABHD6Q9BV23 337 aa12.68□□□□□ -0.38
SMC5-201ENST00000361138 MBNL1Q9NR56 388 aaKnown RBP12.68□□□□□ -0.38
SMC5-201ENST00000361138 CUTCQ9NTM9 273 aa12.68□□□□□ -0.38
SMC5-201ENST00000361138 TRBV11-1A0A0K0K1C0 115 aa12.68□□□□□ -0.38
SMC5-201ENST00000361138 CEBPZOSA8MTT3 80 aa12.68□□□□□ -0.38
SMC5-201ENST00000361138 TRAPPC2LH3BP13 241 aa12.68□□□□□ -0.38
SMC5-201ENST00000361138 PI3P19957 117 aa12.68□□□□□ -0.38
SMC5-201ENST00000361138 CLDN17P56750 224 aa12.68□□□□□ -0.38
SMC5-201ENST00000361138 GRB2P62993 217 aaKnown RBP12.68□□□□□ -0.38
SMC5-201ENST00000361138 BAXQ07812 192 aa12.68□□□□□ -0.38
SMC5-201ENST00000361138 KLF9Q13886 244 aaPredicted RBP12.68□□□□□ -0.38
SMC5-201ENST00000361138 OR4S1Q8NGB4 309 aa12.68□□□□□ -0.38
SMC5-201ENST00000361138 PELI1Q96FA3 418 aa12.68□□□□□ -0.38
SMC5-201ENST00000361138 S1PR5Q9H228 398 aa12.68□□□□□ -0.38
SMC5-201ENST00000361138 SCN4AP35499 1836 aa12.68□□□□□ -0.38
SMC5-201ENST00000361138 MDFIC2A0A1B0GVS7 189 aa12.68□□□□□ -0.38
SMC5-201ENST00000361138 ANKRD30BLA7E2S9 258 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms