RNA–Protein interactions for RNA: ENST00000358966.6

GGPS1-202, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GGPS1, Length 2,740 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-202ENST00000358966 S100A9P06702 114 aaKnown RBP11.3□□□□□ -0.6
GGPS1-202ENST00000358966 APOBEC1P41238 236 aaKnown RBP11.3□□□□□ -0.6
GGPS1-202ENST00000358966 KCNJ3P48549 501 aa11.3□□□□□ -0.6
GGPS1-202ENST00000358966 OR10A3P58181 314 aa11.3□□□□□ -0.6
GGPS1-202ENST00000358966 NANOS3P60323 173 aaKnown RBP11.3□□□□□ -0.6
GGPS1-202ENST00000358966 RAET1LQ5VY80 246 aa11.3□□□□□ -0.6
GGPS1-202ENST00000358966 SPINK14Q6IE38 97 aa11.3□□□□□ -0.6
GGPS1-202ENST00000358966 SLC25A25Q6KCM7 469 aa11.3□□□□□ -0.6
GGPS1-202ENST00000358966 OPN5Q6U736 354 aa11.3□□□□□ -0.6
GGPS1-202ENST00000358966 RBMS3Q6XE24 437 aaKnown RBP11.3□□□□□ -0.6
GGPS1-202ENST00000358966 PRSS33Q8NF86 280 aa11.3□□□□□ -0.6
GGPS1-202ENST00000358966 ZNF519Q8TB69 540 aa11.3□□□□□ -0.6
GGPS1-202ENST00000358966 THOC3Q96J01 351 aaKnown RBP11.3□□□□□ -0.6
GGPS1-202ENST00000358966 DDA1Q9BW61 102 aa11.3□□□□□ -0.6
GGPS1-202ENST00000358966 HES7Q9BYE0 225 aa11.3□□□□□ -0.6
GGPS1-202ENST00000358966 PRSS37A4D1T9 235 aa11.3□□□□□ -0.6
GGPS1-202ENST00000358966 LIPT2A6NK58 231 aa11.3□□□□□ -0.6
GGPS1-202ENST00000358966 RFPL3SP0C7P2 107 aa11.3□□□□□ -0.6
GGPS1-202ENST00000358966 RAB3BP20337 219 aa11.3□□□□□ -0.6
GGPS1-202ENST00000358966 MAP2K3P46734 347 aa11.3□□□□□ -0.6
GGPS1-202ENST00000358966 OC90Q02509 493 aaPredicted RBP11.3□□□□□ -0.6
GGPS1-202ENST00000358966 GGTLC2Q14390 218 aa11.3□□□□□ -0.6
GGPS1-202ENST00000358966 FCN2Q15485 313 aa11.3□□□□□ -0.6
GGPS1-202ENST00000358966 STPG1Q5TH74 334 aa11.3□□□□□ -0.6
GGPS1-202ENST00000358966 TMEM164Q5U3C3 297 aa11.3□□□□□ -0.6
GGPS1-202ENST00000358966 C2CD4CQ8TF44 421 aa11.3□□□□□ -0.6
GGPS1-202ENST00000358966 PSMF1Q92530 271 aa11.3□□□□□ -0.6
GGPS1-202ENST00000358966 PLEKHB1Q9UF11 243 aaPredicted RBP11.3□□□□□ -0.6
GGPS1-202ENST00000358966 ANKRD61A6NGH8 418 aa11.29□□□□□ -0.6
GGPS1-202ENST00000358966 GPR37O15354 613 aa11.29□□□□□ -0.6
GGPS1-202ENST00000358966 RAD1O60671 282 aa11.29□□□□□ -0.6
GGPS1-202ENST00000358966 TXNDC12O95881 172 aa11.29□□□□□ -0.6
GGPS1-202ENST00000358966 IFNA4P05014 189 aa11.29□□□□□ -0.6
GGPS1-202ENST00000358966 OR2T7P0C7T2 308 aa11.29□□□□□ -0.6
GGPS1-202ENST00000358966 RD3LP0DJH9 198 aa11.29□□□□□ -0.6
GGPS1-202ENST00000358966 PRF1P14222 555 aa11.29□□□□□ -0.6
GGPS1-202ENST00000358966 DPP4P27487 766 aa11.29□□□□□ -0.6
GGPS1-202ENST00000358966 ACER2Q5QJU3 275 aa11.29□□□□□ -0.6
GGPS1-202ENST00000358966 CARD17Q5XLA6 110 aa11.29□□□□□ -0.6
GGPS1-202ENST00000358966 SLC22A10Q63ZE4 541 aa11.29□□□□□ -0.6
GGPS1-202ENST00000358966 CD200R1LQ6Q8B3 271 aa11.29□□□□□ -0.6
GGPS1-202ENST00000358966 ZNF227Q86WZ6 799 aa11.29□□□□□ -0.6
GGPS1-202ENST00000358966 SLC43A2Q8N370 569 aa11.29□□□□□ -0.6
GGPS1-202ENST00000358966 OR2T27Q8NH04 317 aa11.29□□□□□ -0.6
GGPS1-202ENST00000358966 STK35Q8TDR2 534 aa11.29□□□□□ -0.6
GGPS1-202ENST00000358966 THEM6Q8WUY1 208 aa11.29□□□□□ -0.6
GGPS1-202ENST00000358966 SLC25A46Q96AG3 418 aa11.29□□□□□ -0.6
GGPS1-202ENST00000358966 DDIT4LQ96D03 193 aa11.29□□□□□ -0.6
GGPS1-202ENST00000358966 CMTM3Q96MX0 182 aa11.29□□□□□ -0.6
GGPS1-202ENST00000358966 CDC6Q99741 560 aa11.29□□□□□ -0.6
GGPS1-202ENST00000358966 DEPPQ9NTK1 212 aa11.29□□□□□ -0.6
GGPS1-202ENST00000358966 UFSP2Q9NUQ7 469 aa11.29□□□□□ -0.6
GGPS1-202ENST00000358966 KLHL13Q9P2N7 655 aa11.29□□□□□ -0.6
GGPS1-202ENST00000358966 B3GAT1Q9P2W7 334 aa11.29□□□□□ -0.6
GGPS1-202ENST00000358966 ST6GALNAC2Q9UJ37 374 aa11.29□□□□□ -0.6
GGPS1-202ENST00000358966 ZNF222Q9UK12 451 aa11.29□□□□□ -0.6
GGPS1-202ENST00000358966 PDCD5O14737 125 aa11.29□□□□□ -0.6
GGPS1-202ENST00000358966 RENP00797 406 aa11.29□□□□□ -0.6
GGPS1-202ENST00000358966 SSPNQ14714 243 aa11.29□□□□□ -0.6
GGPS1-202ENST00000358966 RBMS2Q15434 407 aaKnown RBP11.29□□□□□ -0.6
GGPS1-202ENST00000358966 LCN1P1Q5VSP4 162 aa11.29□□□□□ -0.6
GGPS1-202ENST00000358966 PLXDC2Q6UX71 529 aa11.29□□□□□ -0.6
GGPS1-202ENST00000358966 RHOUQ7L0Q8 258 aa11.29□□□□□ -0.6
GGPS1-202ENST00000358966 YRDCQ86U90 279 aaKnown RBP11.29□□□□□ -0.6
GGPS1-202ENST00000358966 IL22RA1Q8N6P7 574 aa11.29□□□□□ -0.6
GGPS1-202ENST00000358966 FADS6Q8N9I5 356 aa11.29□□□□□ -0.6
GGPS1-202ENST00000358966 POMGNT2Q8NAT1 580 aa11.29□□□□□ -0.6
GGPS1-202ENST00000358966 OR1M1Q8NGA1 313 aa11.29□□□□□ -0.6
GGPS1-202ENST00000358966 PAQR8Q8TEZ7 354 aa11.29□□□□□ -0.6
GGPS1-202ENST00000358966 THAP4Q8WY91 577 aa11.29□□□□□ -0.6
GGPS1-202ENST00000358966 ZNF775Q96BV0 537 aaPredicted RBP11.29□□□□□ -0.6
GGPS1-202ENST00000358966 MRGPRX4Q96LA9 322 aa11.29□□□□□ -0.6
GGPS1-202ENST00000358966 CMSS1Q9BQ75 279 aaKnown RBP11.29□□□□□ -0.6
GGPS1-202ENST00000358966 TXNIPQ9H3M7 391 aa11.29□□□□□ -0.6
GGPS1-202ENST00000358966 MRPL22Q9NWU5 206 aaKnown RBP11.29□□□□□ -0.6
GGPS1-202ENST00000358966 ASH2LQ9UBL3 628 aa11.29□□□□□ -0.6
GGPS1-202ENST00000358966 IKZF2Q9UKS7 526 aa11.29□□□□□ -0.6
GGPS1-202ENST00000358966 SVILO95425 2214 aa11.29□□□□□ -0.6
GGPS1-202ENST00000358966 FAM240BA0A1B0GVZ2 78 aa11.29□□□□□ -0.6
GGPS1-202ENST00000358966 TRDV1A0A1B0GX56 115 aa11.29□□□□□ -0.6
GGPS1-202ENST00000358966 PINLYPA6NC86 204 aa11.29□□□□□ -0.6
GGPS1-202ENST00000358966 OR2T1O43869 369 aa11.29□□□□□ -0.6
GGPS1-202ENST00000358966 HLA-DPB1P04440 258 aa11.29□□□□□ -0.6
GGPS1-202ENST00000358966 FTH1P19P0C7X4 201 aa11.29□□□□□ -0.6
GGPS1-202ENST00000358966 EDNRAP25101 427 aa11.29□□□□□ -0.6
GGPS1-202ENST00000358966 RORCP51449 518 aa11.29□□□□□ -0.6
GGPS1-202ENST00000358966 SUMO3P55854 103 aaPredicted RBP11.29□□□□□ -0.6
GGPS1-202ENST00000358966 ACTC1P68032 377 aa11.29□□□□□ -0.6
GGPS1-202ENST00000358966 ACTA1P68133 377 aa11.29□□□□□ -0.6
GGPS1-202ENST00000358966 ACSM1Q08AH1 577 aa11.29□□□□□ -0.6
GGPS1-202ENST00000358966 POU4F2Q12837 409 aa11.29□□□□□ -0.6
GGPS1-202ENST00000358966 C3orf33Q6P1S2 294 aa11.29□□□□□ -0.6
GGPS1-202ENST00000358966 H1FNTQ75WM6 255 aaPredicted RBP11.29□□□□□ -0.6
GGPS1-202ENST00000358966 OR2T4Q8NH00 348 aa11.29□□□□□ -0.6
GGPS1-202ENST00000358966 RNF166Q96A37 237 aaPredicted RBP11.29□□□□□ -0.6
GGPS1-202ENST00000358966 OR14A2Q96R54 314 aa11.29□□□□□ -0.6
GGPS1-202ENST00000358966 PLA2G3Q9NZ20 509 aa11.29□□□□□ -0.6
GGPS1-202ENST00000358966 COMMD3Q9UBI1 195 aa11.29□□□□□ -0.6
GGPS1-202ENST00000358966 B9D1Q9UPM9 204 aa11.29□□□□□ -0.6
GGPS1-202ENST00000358966 COA3Q9Y2R0 106 aaPredicted RBP11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms