RNA–Protein interactions for RNA: ENST00000357943.9

CCNE1-202, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-202ENST00000357943 YIPF3Q9GZM5 350 aa12.91□□□□□ -0.34
CCNE1-202ENST00000357943 MRPS18AQ9NVS2 196 aaKnown RBP12.91□□□□□ -0.34
CCNE1-202ENST00000357943 LAMP5Q9UJQ1 280 aa12.91□□□□□ -0.34
CCNE1-202ENST00000357943 EXOGQ9Y2C4 368 aaKnown RBP12.91□□□□□ -0.34
CCNE1-202ENST00000357943 MYRFQ9Y2G1 1151 aa12.91□□□□□ -0.34
CCNE1-202ENST00000357943 DPRXA6NFQ7 191 aa12.91□□□□□ -0.34
CCNE1-202ENST00000357943 SYNGR3O43761 229 aa12.91□□□□□ -0.34
CCNE1-202ENST00000357943 PLP2Q04941 152 aa12.91□□□□□ -0.34
CCNE1-202ENST00000357943 SPATC1Q76KD6 591 aa12.91□□□□□ -0.34
CCNE1-202ENST00000357943 OR10H4Q8NGA5 316 aa12.91□□□□□ -0.34
CCNE1-202ENST00000357943 FAM222BQ8WU58 562 aa12.91□□□□□ -0.34
CCNE1-202ENST00000357943 SLC7A6Q92536 515 aa12.91□□□□□ -0.34
CCNE1-202ENST00000357943 GGHQ92820 318 aa12.91□□□□□ -0.34
CCNE1-202ENST00000357943 SLAMF6Q96DU3 332 aa12.91□□□□□ -0.34
CCNE1-202ENST00000357943 MOV10Q9HCE1 1003 aaKnown RBP12.91□□□□□ -0.34
CCNE1-202ENST00000357943 LOC100509620A0A075B734 347 aa12.9□□□□□ -0.34
CCNE1-202ENST00000357943 IQCMA0A1B0GVH7 501 aa12.9□□□□□ -0.34
CCNE1-202ENST00000357943 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.9□□□□□ -0.34
CCNE1-202ENST00000357943 A0A1W2PQL4 384 aaPredicted RBP12.9□□□□□ -0.34
CCNE1-202ENST00000357943 PRR32B1ATL7 298 aa12.9□□□□□ -0.34
CCNE1-202ENST00000357943 PSMD9O00233 223 aa12.9□□□□□ -0.34
CCNE1-202ENST00000357943 SLC1A7O00341 560 aa12.9□□□□□ -0.34
CCNE1-202ENST00000357943 ADRA2AP08913 450 aa12.9□□□□□ -0.34
CCNE1-202ENST00000357943 PAX7P23759 505 aa12.9□□□□□ -0.34
CCNE1-202ENST00000357943 CD40P25942 277 aa12.9□□□□□ -0.34
CCNE1-202ENST00000357943 STOMP27105 288 aa12.9□□□□□ -0.34
CCNE1-202ENST00000357943 HTR5AP47898 357 aa12.9□□□□□ -0.34
CCNE1-202ENST00000357943 CXCR4P61073 352 aa12.9□□□□□ -0.34
CCNE1-202ENST00000357943 BSPH1Q075Z2 132 aa12.9□□□□□ -0.34
CCNE1-202ENST00000357943 RAB40BQ12829 278 aa12.9□□□□□ -0.34
CCNE1-202ENST00000357943 RAB35Q15286 201 aa12.9□□□□□ -0.34
CCNE1-202ENST00000357943 ELFN2Q5R3F8 820 aa12.9□□□□□ -0.34
CCNE1-202ENST00000357943 SSX6Q7RTT6 188 aa12.9□□□□□ -0.34
CCNE1-202ENST00000357943 ZNF454Q8N9F8 522 aa12.9□□□□□ -0.34
CCNE1-202ENST00000357943 SLC30A7Q8NEW0 376 aa12.9□□□□□ -0.34
CCNE1-202ENST00000357943 OR52I1Q8NGK6 324 aa12.9□□□□□ -0.34
CCNE1-202ENST00000357943 PLPPR2Q96GM1 343 aa12.9□□□□□ -0.34
CCNE1-202ENST00000357943 NGBQ9NPG2 151 aa12.9□□□□□ -0.34
CCNE1-202ENST00000357943 CENPMQ9NSP4 180 aa12.9□□□□□ -0.34
CCNE1-202ENST00000357943 PLCXD1Q9NUJ7 323 aa12.9□□□□□ -0.34
CCNE1-202ENST00000357943 PLEKHB1Q9UF11 243 aaPredicted RBP12.9□□□□□ -0.34
CCNE1-202ENST00000357943 PSORS1C1Q9UIG5 152 aa12.9□□□□□ -0.34
CCNE1-202ENST00000357943 TMEM14AQ9Y6G1 99 aa12.9□□□□□ -0.34
CCNE1-202ENST00000357943 OR6C6A6NF89 314 aa12.89□□□□□ -0.35
CCNE1-202ENST00000357943 DEFB108AA8MXU0 73 aa12.89□□□□□ -0.35
CCNE1-202ENST00000357943 FAM20BO75063 409 aa12.89□□□□□ -0.35
CCNE1-202ENST00000357943 DBHP09172 617 aa12.89□□□□□ -0.35
CCNE1-202ENST00000357943 OR2T7P0C7T2 308 aa12.89□□□□□ -0.35
CCNE1-202ENST00000357943 CCNOP22674 350 aa12.89□□□□□ -0.35
CCNE1-202ENST00000357943 MVKQ03426 396 aa12.89□□□□□ -0.35
CCNE1-202ENST00000357943 SPOCK1Q08629 439 aa12.89□□□□□ -0.35
CCNE1-202ENST00000357943 RSPO1Q2MKA7 263 aaPredicted RBP12.89□□□□□ -0.35
CCNE1-202ENST00000357943 C3orf36Q3SXR2 165 aa12.89□□□□□ -0.35
CCNE1-202ENST00000357943 KLHL22Q53GT1 634 aa12.89□□□□□ -0.35
CCNE1-202ENST00000357943 TMEM108Q6UXF1 575 aa12.89□□□□□ -0.35
CCNE1-202ENST00000357943 ZNF786Q8N393 782 aa12.89□□□□□ -0.35
CCNE1-202ENST00000357943 PAQR4Q8N4S7 273 aaPredicted RBP12.89□□□□□ -0.35
CCNE1-202ENST00000357943 OR2T27Q8NH04 317 aa12.89□□□□□ -0.35
CCNE1-202ENST00000357943 OR1F12Q8NHA8 337 aa12.89□□□□□ -0.35
CCNE1-202ENST00000357943 RNF133Q8WVZ7 376 aa12.89□□□□□ -0.35
CCNE1-202ENST00000357943 POM121L2Q96KW2 1035 aa12.89□□□□□ -0.35
CCNE1-202ENST00000357943 ATF6BQ99941 703 aa12.89□□□□□ -0.35
CCNE1-202ENST00000357943 HDHD2Q9H0R4 259 aa12.89□□□□□ -0.35
CCNE1-202ENST00000357943 FBXL3Q9UKT7 428 aa12.89□□□□□ -0.35
CCNE1-202ENST00000357943 C5orf49A4QMS7 147 aa12.88□□□□□ -0.35
CCNE1-202ENST00000357943 ABCD4O14678 606 aa12.88□□□□□ -0.35
CCNE1-202ENST00000357943 MAGEB4O15481 346 aaPredicted RBP12.88□□□□□ -0.35
CCNE1-202ENST00000357943 TNFAIP8O95379 198 aa12.88□□□□□ -0.35
CCNE1-202ENST00000357943 FADS2O95864 444 aaKnown RBP12.88□□□□□ -0.35
CCNE1-202ENST00000357943 PTHP01270 115 aa12.88□□□□□ -0.35
CCNE1-202ENST00000357943 PTAFRP25105 342 aa12.88□□□□□ -0.35
CCNE1-202ENST00000357943 CALCRP30988 508 aa12.88□□□□□ -0.35
CCNE1-202ENST00000357943 APLNRP35414 380 aa12.88□□□□□ -0.35
CCNE1-202ENST00000357943 NAAAQ02083 359 aa12.88□□□□□ -0.35
CCNE1-202ENST00000357943 ZNF85Q03923 595 aa12.88□□□□□ -0.35
CCNE1-202ENST00000357943 BEX5Q5H9J7 111 aa12.88□□□□□ -0.35
CCNE1-202ENST00000357943 NCMAPQ5T1S8 102 aa12.88□□□□□ -0.35
CCNE1-202ENST00000357943 ZNF322Q6U7Q0 402 aaPredicted RBP12.88□□□□□ -0.35
CCNE1-202ENST00000357943 LRRN1Q6UXK5 716 aa12.88□□□□□ -0.35
CCNE1-202ENST00000357943 AHSA2Q719I0 299 aa12.88□□□□□ -0.35
CCNE1-202ENST00000357943 ZNF540Q8NDQ6 660 aa12.88□□□□□ -0.35
CCNE1-202ENST00000357943 SGCDQ92629 289 aa12.88□□□□□ -0.35
CCNE1-202ENST00000357943 PIK3IP1Q96FE7 263 aa12.88□□□□□ -0.35
CCNE1-202ENST00000357943 MNTQ99583 582 aa12.88□□□□□ -0.35
CCNE1-202ENST00000357943 COQ7Q99807 217 aa12.88□□□□□ -0.35
CCNE1-202ENST00000357943 ESRP2Q9H6T0 727 aaKnown RBP12.88□□□□□ -0.35
CCNE1-202ENST00000357943 ZNF696Q9H7X3 374 aa12.88□□□□□ -0.35
CCNE1-202ENST00000357943 SLC24A3Q9HC58 644 aa12.88□□□□□ -0.35
CCNE1-202ENST00000357943 DDX28Q9NUL7 540 aaKnown RBP12.88□□□□□ -0.35
CCNE1-202ENST00000357943 KCNN3Q9UGI6 736 aa12.88□□□□□ -0.35
CCNE1-202ENST00000357943 RTTNQ86VV8 2226 aa12.88□□□□□ -0.35
CCNE1-202ENST00000357943 IGHV2OR16-5A0A0B4J2B6 119 aa12.88□□□□□ -0.35
CCNE1-202ENST00000357943 ZNF878C9JN71 531 aa12.88□□□□□ -0.35
CCNE1-202ENST00000357943 PTGES3LE9PB15 166 aa12.88□□□□□ -0.35
CCNE1-202ENST00000357943 ZNF670-ZNF695F2Z2N8 137 aa12.88□□□□□ -0.35
CCNE1-202ENST00000357943 IGHA1P01876 353 aa12.88□□□□□ -0.35
CCNE1-202ENST00000357943 CCDC159P0C7I6 412 aa12.88□□□□□ -0.35
CCNE1-202ENST00000357943 COX5BP10606 129 aa12.88□□□□□ -0.35
CCNE1-202ENST00000357943 ZNF35P13682 527 aa12.88□□□□□ -0.35
CCNE1-202ENST00000357943 COX6B1P14854 86 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms