RNA–Protein interactions for RNA: ENST00000357409.9

VPS13A-202, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 9,967 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-202ENST00000357409 ZNRF4Q8WWF5 429 aa6.67□□□□□ -1.34
VPS13A-202ENST00000357409 OR8B4Q96RC9 309 aa6.67□□□□□ -1.34
VPS13A-202ENST00000357409 ACOT13Q9NPJ3 140 aa6.67□□□□□ -1.34
VPS13A-202ENST00000357409 SDHAF2Q9NX18 166 aa6.67□□□□□ -1.34
VPS13A-202ENST00000357409 TAAR3PQ9P1P4 343 aa6.67□□□□□ -1.34
VPS13A-202ENST00000357409 IGKV3OR2-268A0A0C4DH90 116 aa6.67□□□□□ -1.34
VPS13A-202ENST00000357409 LRRC30A6NM36 301 aa6.67□□□□□ -1.34
VPS13A-202ENST00000357409 F5H697 171 aa6.67□□□□□ -1.34
VPS13A-202ENST00000357409 CHEK1O14757 476 aa6.67□□□□□ -1.34
VPS13A-202ENST00000357409 OIP5O43482 229 aa6.67□□□□□ -1.34
VPS13A-202ENST00000357409 T-ENOLP0DO92 83 aa6.67□□□□□ -1.34
VPS13A-202ENST00000357409 ALOX5APP20292 161 aa6.67□□□□□ -1.34
VPS13A-202ENST00000357409 OPRD1P41143 372 aa6.67□□□□□ -1.34
VPS13A-202ENST00000357409 KIAA1024LP59773 190 aa6.67□□□□□ -1.34
VPS13A-202ENST00000357409 VEZF1Q14119 521 aa6.67□□□□□ -1.34
VPS13A-202ENST00000357409 KEAP1Q14145 624 aa6.67□□□□□ -1.34
VPS13A-202ENST00000357409 LY6EQ16553 131 aa6.67□□□□□ -1.34
VPS13A-202ENST00000357409 LYG1Q8N1E2 194 aa6.67□□□□□ -1.34
VPS13A-202ENST00000357409 OR1S2Q8NGQ3 325 aa6.67□□□□□ -1.34
VPS13A-202ENST00000357409 SLC35B4Q969S0 331 aa6.67□□□□□ -1.34
VPS13A-202ENST00000357409 SLC46A1Q96NT5 459 aa6.67□□□□□ -1.34
VPS13A-202ENST00000357409 IER2Q9BTL4 223 aa6.67□□□□□ -1.34
VPS13A-202ENST00000357409 ANKRD19PQ9H560 264 aa6.67□□□□□ -1.34
VPS13A-202ENST00000357409 BLACEA4D250 179 aa6.67□□□□□ -1.34
VPS13A-202ENST00000357409 FABP4P15090 132 aa6.67□□□□□ -1.34
VPS13A-202ENST00000357409 HOXC13P31276 330 aa6.67□□□□□ -1.34
VPS13A-202ENST00000357409 GDNFP39905 211 aa6.67□□□□□ -1.34
VPS13A-202ENST00000357409 RPP30P78346 268 aaKnown RBP6.67□□□□□ -1.34
VPS13A-202ENST00000357409 FMODQ06828 376 aa6.67□□□□□ -1.34
VPS13A-202ENST00000357409 GK2Q14410 553 aaPredicted RBP6.67□□□□□ -1.34
VPS13A-202ENST00000357409 ARL6IP1Q15041 203 aa6.67□□□□□ -1.34
VPS13A-202ENST00000357409 PLAG1Q6DJT9 500 aa6.67□□□□□ -1.34
VPS13A-202ENST00000357409 C15orf40Q8WUR7 153 aa6.67□□□□□ -1.34
VPS13A-202ENST00000357409 BOD1Q96IK1 185 aa6.67□□□□□ -1.34
VPS13A-202ENST00000357409 LHX6Q9UPM6 363 aa6.67□□□□□ -1.34
VPS13A-202ENST00000357409 ZIC3O60481 467 aa6.67□□□□□ -1.34
VPS13A-202ENST00000357409 HLA-HP01893 362 aa6.67□□□□□ -1.34
VPS13A-202ENST00000357409 CATR1Q13166 79 aa6.67□□□□□ -1.34
VPS13A-202ENST00000357409 PWWP2BQ6NUJ5 590 aa6.67□□□□□ -1.34
VPS13A-202ENST00000357409 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.67□□□□□ -1.34
VPS13A-202ENST00000357409 DPPA2Q7Z7J5 298 aa6.67□□□□□ -1.34
VPS13A-202ENST00000357409 CNTNAP3Q9BZ76 1288 aa6.67□□□□□ -1.34
VPS13A-202ENST00000357409 STEAP1BQ6NZ63 245 aa6.67□□□□□ -1.34
VPS13A-202ENST00000357409 CBARPQ8N350 705 aaPredicted RBP6.67□□□□□ -1.34
VPS13A-202ENST00000357409 C17orf78Q8N4C9 275 aa6.67□□□□□ -1.34
VPS13A-202ENST00000357409 OR51S1Q8NGJ8 323 aa6.67□□□□□ -1.34
VPS13A-202ENST00000357409 LINC00052Q96N35 136 aa6.67□□□□□ -1.34
VPS13A-202ENST00000357409 HSBP1L1C9JCN9 74 aa6.66□□□□□ -1.34
VPS13A-202ENST00000357409 FGF4P08620 206 aa6.66□□□□□ -1.34
VPS13A-202ENST00000357409 TSPAN31Q12999 210 aa6.66□□□□□ -1.34
VPS13A-202ENST00000357409 IHHQ14623 411 aa6.66□□□□□ -1.34
VPS13A-202ENST00000357409 ST8SIA2Q92186 375 aa6.66□□□□□ -1.34
VPS13A-202ENST00000357409 DCAF16Q9NXF7 216 aa6.66□□□□□ -1.34
VPS13A-202ENST00000357409 FETUBQ9UGM5 382 aa6.66□□□□□ -1.34
VPS13A-202ENST00000357409 GAB2Q9UQC2 676 aa6.66□□□□□ -1.34
VPS13A-202ENST00000357409 TATDN3Q17R31 274 aa6.66□□□□□ -1.34
VPS13A-202ENST00000357409 TIGD3Q6B0B8 471 aa6.66□□□□□ -1.34
VPS13A-202ENST00000357409 DHRS7BQ6IAN0 325 aaPredicted RBP6.66□□□□□ -1.34
VPS13A-202ENST00000357409 NKX2-8O15522 239 aa6.66□□□□□ -1.34
VPS13A-202ENST00000357409 MAGEA5P43359 124 aa6.66□□□□□ -1.34
VPS13A-202ENST00000357409 EXT1Q16394 746 aa6.66□□□□□ -1.34
VPS13A-202ENST00000357409 RAB41Q5JT25 222 aa6.66□□□□□ -1.34
VPS13A-202ENST00000357409 LCN8Q6JVE9 175 aa6.66□□□□□ -1.34
VPS13A-202ENST00000357409 CCDC190Q86UF4 302 aa6.66□□□□□ -1.34
VPS13A-202ENST00000357409 TEAD3Q99594 435 aa6.66□□□□□ -1.34
VPS13A-202ENST00000357409 SLIT2O94813 1529 aa6.66□□□□□ -1.34
VPS13A-202ENST00000357409 PNLIPP16233 465 aa6.66□□□□□ -1.34
VPS13A-202ENST00000357409 FAHP16930 419 aa6.66□□□□□ -1.34
VPS13A-202ENST00000357409 S100A4P26447 101 aaKnown RBP6.66□□□□□ -1.34
VPS13A-202ENST00000357409 TOMM34Q15785 309 aaPredicted RBP6.66□□□□□ -1.34
VPS13A-202ENST00000357409 MBOAT2Q6ZWT7 520 aa6.66□□□□□ -1.34
VPS13A-202ENST00000357409 H1FNTQ75WM6 255 aaPredicted RBP6.66□□□□□ -1.34
VPS13A-202ENST00000357409 SLCO2A1Q92959 643 aa6.66□□□□□ -1.34
VPS13A-202ENST00000357409 TOX2Q96NM4 488 aa6.66□□□□□ -1.34
VPS13A-202ENST00000357409 POFUT1Q9H488 388 aa6.66□□□□□ -1.34
VPS13A-202ENST00000357409 EXOSC3Q9NQT5 275 aaKnown RBP6.66□□□□□ -1.34
VPS13A-202ENST00000357409 CCL21O00585 134 aa6.66□□□□□ -1.34
VPS13A-202ENST00000357409 SNNO75324 88 aaPredicted RBP6.66□□□□□ -1.34
VPS13A-202ENST00000357409 CELA2AP08217 269 aa6.66□□□□□ -1.34
VPS13A-202ENST00000357409 RAB11AP62491 216 aa6.66□□□□□ -1.34
VPS13A-202ENST00000357409 PIK3IP1Q96FE7 263 aa6.66□□□□□ -1.34
VPS13A-202ENST00000357409 BIRC8Q96P09 236 aa6.66□□□□□ -1.34
VPS13A-202ENST00000357409 ADAM19Q9H013 955 aa6.66□□□□□ -1.34
VPS13A-202ENST00000357409 PRDM7Q9NQW5 492 aa6.66□□□□□ -1.34
VPS13A-202ENST00000357409 KLF13Q9Y2Y9 288 aaPredicted RBP6.66□□□□□ -1.34
VPS13A-202ENST00000357409 CYB5BO43169 146 aa6.66□□□□□ -1.34
VPS13A-202ENST00000357409 SSSCA1O60232 199 aa6.66□□□□□ -1.34
VPS13A-202ENST00000357409 ATG12O94817 140 aa6.66□□□□□ -1.34
VPS13A-202ENST00000357409 KRASP01116 189 aa6.66□□□□□ -1.34
VPS13A-202ENST00000357409 CT45A6P0DMU7 189 aa6.66□□□□□ -1.34
VPS13A-202ENST00000357409 CT45A5P0DMU8 189 aa6.66□□□□□ -1.34
VPS13A-202ENST00000357409 CT45A7P0DMV0 189 aa6.66□□□□□ -1.34
VPS13A-202ENST00000357409 CT45A8P0DMV1 189 aa6.66□□□□□ -1.34
VPS13A-202ENST00000357409 CT45A9P0DMV2 189 aa6.66□□□□□ -1.34
VPS13A-202ENST00000357409 UBE2KP61086 200 aa6.66□□□□□ -1.34
VPS13A-202ENST00000357409 RPL27P61353 136 aaKnown RBP6.66□□□□□ -1.34
VPS13A-202ENST00000357409 CT45A2Q5DJT8 189 aa6.66□□□□□ -1.34
VPS13A-202ENST00000357409 CT45A1Q5HYN5 189 aa6.66□□□□□ -1.34
VPS13A-202ENST00000357409 CT45A3Q8NHU0 189 aa6.66□□□□□ -1.34
VPS13A-202ENST00000357409 DHRS9Q9BPW9 319 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms