RNA–Protein interactions for RNA: ENST00000357348.9

RTFDC1-202, Transcript of Protein RTF2 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTFDC1, Length 2,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-202ENST00000357348 SRSF4Q08170 494 aaKnown RBP11.37□□□□□ -0.59
RTFDC1-202ENST00000357348 PXT1Q8NFP0 134 aa11.37□□□□□ -0.59
RTFDC1-202ENST00000357348 ADIPOR1Q96A54 375 aa11.37□□□□□ -0.59
RTFDC1-202ENST00000357348 GPX7Q96SL4 187 aaPredicted RBP11.37□□□□□ -0.59
RTFDC1-202ENST00000357348 NPAS1Q99742 590 aa11.37□□□□□ -0.59
RTFDC1-202ENST00000357348 ZNF416Q9BWM5 594 aa11.37□□□□□ -0.59
RTFDC1-202ENST00000357348 FXYD6Q9H0Q3 95 aa11.37□□□□□ -0.59
RTFDC1-202ENST00000357348 SLITRK2Q9H156 845 aa11.37□□□□□ -0.59
RTFDC1-202ENST00000357348 ZNF160Q9HCG1 818 aa11.37□□□□□ -0.59
RTFDC1-202ENST00000357348 RASL12Q9NYN1 266 aa11.37□□□□□ -0.59
RTFDC1-202ENST00000357348 IGHV1-45A0A0A0MS14 117 aa11.37□□□□□ -0.59
RTFDC1-202ENST00000357348 TRAV14DV4A0A0A6YYC5 116 aa11.37□□□□□ -0.59
RTFDC1-202ENST00000357348 A0A1B0GW55 424 aa11.37□□□□□ -0.59
RTFDC1-202ENST00000357348 OR6C68A6NDL8 312 aa11.37□□□□□ -0.59
RTFDC1-202ENST00000357348 ABHD16AO95870 558 aa11.37□□□□□ -0.59
RTFDC1-202ENST00000357348 UBBP0CG47 229 aa11.37□□□□□ -0.59
RTFDC1-202ENST00000357348 UBCP0CG48 685 aaKnown RBP11.37□□□□□ -0.59
RTFDC1-202ENST00000357348 DUX4L2P0CJ85 424 aa11.37□□□□□ -0.59
RTFDC1-202ENST00000357348 DUX4L3P0CJ86 424 aa11.37□□□□□ -0.59
RTFDC1-202ENST00000357348 DUX4L4P0CJ87 422 aa11.37□□□□□ -0.59
RTFDC1-202ENST00000357348 DUX4L5P0CJ88 424 aa11.37□□□□□ -0.59
RTFDC1-202ENST00000357348 DUX4L6P0CJ89 424 aa11.37□□□□□ -0.59
RTFDC1-202ENST00000357348 DUX4L7P0CJ90 424 aa11.37□□□□□ -0.59
RTFDC1-202ENST00000357348 TMIGD3P0DMS9 266 aaPredicted RBP11.37□□□□□ -0.59
RTFDC1-202ENST00000357348 MGMTP16455 207 aa11.37□□□□□ -0.59
RTFDC1-202ENST00000357348 ITPKBP27987 946 aa11.37□□□□□ -0.59
RTFDC1-202ENST00000357348 RPS27AP62979 156 aaKnown RBP11.37□□□□□ -0.59
RTFDC1-202ENST00000357348 UBA52P62987 128 aaKnown RBP11.37□□□□□ -0.59
RTFDC1-202ENST00000357348 FLI1Q01543 452 aaPredicted RBP11.37□□□□□ -0.59
RTFDC1-202ENST00000357348 SSBP1Q04837 148 aaKnown RBP11.37□□□□□ -0.59
RTFDC1-202ENST00000357348 PCOLCEQ15113 449 aa11.37□□□□□ -0.59
RTFDC1-202ENST00000357348 ALG10BQ5I7T1 473 aa11.37□□□□□ -0.59
RTFDC1-202ENST00000357348 ANKRD16Q6P6B7 361 aa11.37□□□□□ -0.59
RTFDC1-202ENST00000357348 TMPRSS7Q7RTY8 843 aa11.37□□□□□ -0.59
RTFDC1-202ENST00000357348 EXD3Q8N9H8 876 aa11.37□□□□□ -0.59
RTFDC1-202ENST00000357348 ADOQ96SZ5 270 aa11.37□□□□□ -0.59
RTFDC1-202ENST00000357348 TCF7L1Q9HCS4 588 aa11.37□□□□□ -0.59
RTFDC1-202ENST00000357348 MYOZ1Q9NP98 299 aaPredicted RBP11.37□□□□□ -0.59
RTFDC1-202ENST00000357348 PCDHB16Q9NRJ7 776 aa11.37□□□□□ -0.59
RTFDC1-202ENST00000357348 DUX4Q9UBX2 424 aa11.37□□□□□ -0.59
RTFDC1-202ENST00000357348 KCNK7Q9Y2U2 307 aa11.37□□□□□ -0.59
RTFDC1-202ENST00000357348 PRELID3BQ9Y3B1 194 aa11.37□□□□□ -0.59
RTFDC1-202ENST00000357348 HEATR5AQ86XA9 2040 aa11.37□□□□□ -0.59
RTFDC1-202ENST00000357348 EML6Q6ZMW3 1958 aa11.36□□□□□ -0.59
RTFDC1-202ENST00000357348 H3BUI4 141 aa11.36□□□□□ -0.59
RTFDC1-202ENST00000357348 GOSR2O14653 212 aa11.36□□□□□ -0.59
RTFDC1-202ENST00000357348 ZNF354AO60765 605 aaPredicted RBP11.36□□□□□ -0.59
RTFDC1-202ENST00000357348 COX6A1P12074 109 aa11.36□□□□□ -0.59
RTFDC1-202ENST00000357348 PPICP45877 212 aa11.36□□□□□ -0.59
RTFDC1-202ENST00000357348 RPS4XP62701 263 aaKnown RBP11.36□□□□□ -0.59
RTFDC1-202ENST00000357348 LTBQ06643 244 aa11.36□□□□□ -0.59
RTFDC1-202ENST00000357348 FOXC1Q12948 553 aa11.36□□□□□ -0.59
RTFDC1-202ENST00000357348 SRSF6Q13247 344 aaKnown RBP11.36□□□□□ -0.59
RTFDC1-202ENST00000357348 ALKBH1Q13686 389 aaKnown RBP11.36□□□□□ -0.59
RTFDC1-202ENST00000357348 NDUFAF6Q330K2 333 aa11.36□□□□□ -0.59
RTFDC1-202ENST00000357348 PCGF3Q3KNV8 242 aa11.36□□□□□ -0.59
RTFDC1-202ENST00000357348 PABPC1L2AQ5JQF8 200 aa11.36□□□□□ -0.59
RTFDC1-202ENST00000357348 MOB3CQ70IA8 216 aa11.36□□□□□ -0.59
RTFDC1-202ENST00000357348 KRT77Q7Z794 578 aa11.36□□□□□ -0.59
RTFDC1-202ENST00000357348 GATSQ8NAP1 163 aa11.36□□□□□ -0.59
RTFDC1-202ENST00000357348 OR4C3Q8NH37 302 aa11.36□□□□□ -0.59
RTFDC1-202ENST00000357348 NMNAT3Q96T66 252 aa11.36□□□□□ -0.59
RTFDC1-202ENST00000357348 MFFQ9GZY8 342 aa11.36□□□□□ -0.59
RTFDC1-202ENST00000357348 TSPAN10Q9H1Z9 355 aaPredicted RBP11.36□□□□□ -0.59
RTFDC1-202ENST00000357348 SLC6A5Q9Y345 797 aa11.36□□□□□ -0.59
RTFDC1-202ENST00000357348 ZNF175Q9Y473 711 aa11.36□□□□□ -0.59
RTFDC1-202ENST00000357348 PCSK5Q92824 1860 aa11.36□□□□□ -0.59
RTFDC1-202ENST00000357348 DOCK10Q96BY6 2186 aa11.36□□□□□ -0.59
RTFDC1-202ENST00000357348 GMFGO60234 142 aa11.36□□□□□ -0.59
RTFDC1-202ENST00000357348 IGF2P01344 180 aa11.36□□□□□ -0.59
RTFDC1-202ENST00000357348 RLN2P04090 185 aa11.36□□□□□ -0.59
RTFDC1-202ENST00000357348 SLC25A1P53007 311 aa11.36□□□□□ -0.59
RTFDC1-202ENST00000357348 PLA2G7Q13093 441 aa11.36□□□□□ -0.59
RTFDC1-202ENST00000357348 SHEQ5VZ18 495 aa11.36□□□□□ -0.59
RTFDC1-202ENST00000357348 ULK3Q6PHR2 472 aa11.36□□□□□ -0.59
RTFDC1-202ENST00000357348 VASH2Q86V25 355 aa11.36□□□□□ -0.59
RTFDC1-202ENST00000357348 ZPLD1Q8TCW7 415 aa11.36□□□□□ -0.59
RTFDC1-202ENST00000357348 NKD1Q969G9 470 aa11.36□□□□□ -0.59
RTFDC1-202ENST00000357348 STEAP1Q9UHE8 339 aa11.36□□□□□ -0.59
RTFDC1-202ENST00000357348 ADAM18Q9Y3Q7 739 aa11.36□□□□□ -0.59
RTFDC1-202ENST00000357348 PCNX3Q9H6A9 2034 aa11.35□□□□□ -0.59
RTFDC1-202ENST00000357348 MED13Q9UHV7 2174 aa11.35□□□□□ -0.59
RTFDC1-202ENST00000357348 ARPC4-TTLL3A0A0A6YYG9 625 aa11.35□□□□□ -0.59
RTFDC1-202ENST00000357348 NSG1A0A0A6YYJ2 146 aa11.35□□□□□ -0.59
RTFDC1-202ENST00000357348 GGT3PA6NGU5 568 aa11.35□□□□□ -0.59
RTFDC1-202ENST00000357348 C17orf51A8MQB3 221 aa11.35□□□□□ -0.59
RTFDC1-202ENST00000357348 IMPA2O14732 288 aa11.35□□□□□ -0.59
RTFDC1-202ENST00000357348 ZNF432O94892 652 aa11.35□□□□□ -0.59
RTFDC1-202ENST00000357348 CD8AP01732 235 aa11.35□□□□□ -0.59
RTFDC1-202ENST00000357348 ITGB2P05107 769 aa11.35□□□□□ -0.59
RTFDC1-202ENST00000357348 TACSTD2P09758 323 aa11.35□□□□□ -0.59
RTFDC1-202ENST00000357348 AKAIN1P0CW23 69 aa11.35□□□□□ -0.59
RTFDC1-202ENST00000357348 PLCXD2Q0VAA5 305 aa11.35□□□□□ -0.59
RTFDC1-202ENST00000357348 LY6G6FQ5SQ64 297 aa11.35□□□□□ -0.59
RTFDC1-202ENST00000357348 SLC16A9Q7RTY1 509 aa11.35□□□□□ -0.59
RTFDC1-202ENST00000357348 PPP1R32Q7Z5V6 425 aa11.35□□□□□ -0.59
RTFDC1-202ENST00000357348 OR5AK2Q8NH90 309 aa11.35□□□□□ -0.59
RTFDC1-202ENST00000357348 ST8SIA2Q92186 375 aa11.35□□□□□ -0.59
RTFDC1-202ENST00000357348 FKRPQ9H9S5 495 aa11.35□□□□□ -0.59
RTFDC1-202ENST00000357348 ASCL3Q9NQ33 180 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms