RNA–Protein interactions for RNA: ENST00000354071.7

BRCA1-202, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-202ENST00000354071 V9GY05 133 aa1.25□□□□□ -2.21
BRCA1-202ENST00000354071 GAKO14976 1311 aa1.25□□□□□ -2.21
BRCA1-202ENST00000354071 UGGT2Q9NYU1 1516 aa1.25□□□□□ -2.21
BRCA1-202ENST00000354071 ABCA12Q86UK0 2595 aa1.25□□□□□ -2.21
BRCA1-202ENST00000354071 CIB4A0PJX0 185 aa1.25□□□□□ -2.21
BRCA1-202ENST00000354071 IQCF5A8MTL0 148 aa1.25□□□□□ -2.21
BRCA1-202ENST00000354071 GPAA1O43292 621 aa1.25□□□□□ -2.21
BRCA1-202ENST00000354071 FGFR1OPO95684 399 aaKnown RBP1.25□□□□□ -2.21
BRCA1-202ENST00000354071 HLA-HP01893 362 aa1.25□□□□□ -2.21
BRCA1-202ENST00000354071 IVLP07476 585 aa1.25□□□□□ -2.21
BRCA1-202ENST00000354071 PSMC3P17980 439 aa1.25□□□□□ -2.21
BRCA1-202ENST00000354071 GPR1P46091 355 aa1.25□□□□□ -2.21
BRCA1-202ENST00000354071 ATP12AP54707 1039 aa1.25□□□□□ -2.21
BRCA1-202ENST00000354071 FBXW4P57775 412 aa1.25□□□□□ -2.21
BRCA1-202ENST00000354071 ECH1Q13011 328 aa1.25□□□□□ -2.21
BRCA1-202ENST00000354071 SLC39A6Q13433 755 aa1.25□□□□□ -2.21
BRCA1-202ENST00000354071 AANATQ16613 207 aa1.25□□□□□ -2.21
BRCA1-202ENST00000354071 ZNF470Q6ECI4 717 aa1.25□□□□□ -2.21
BRCA1-202ENST00000354071 Q6ZVH6 145 aa1.25□□□□□ -2.21
BRCA1-202ENST00000354071 LRRC49Q8IUZ0 686 aa1.25□□□□□ -2.21
BRCA1-202ENST00000354071 BOD1L2Q8IYS8 172 aa1.25□□□□□ -2.21
BRCA1-202ENST00000354071 MITD1Q8WV92 249 aa1.25□□□□□ -2.21
BRCA1-202ENST00000354071 GTF3AQ92664 365 aaKnown RBP1.25□□□□□ -2.21
BRCA1-202ENST00000354071 TUBB1Q9H4B7 451 aa1.25□□□□□ -2.21
BRCA1-202ENST00000354071 SMYD3Q9H7B4 428 aa1.25□□□□□ -2.21
BRCA1-202ENST00000354071 NIPAL2Q9H841 368 aa1.25□□□□□ -2.21
BRCA1-202ENST00000354071 HEXA-AS1Q9H8Q6 139 aa1.25□□□□□ -2.21
BRCA1-202ENST00000354071 ZNHIT6Q9NWK9 470 aaKnown RBP1.25□□□□□ -2.21
BRCA1-202ENST00000354071 CLEC5AQ9NY25 188 aa1.25□□□□□ -2.21
BRCA1-202ENST00000354071 UGT2A1Q9Y4X1 527 aa1.25□□□□□ -2.21
BRCA1-202ENST00000354071 UBIAD1Q9Y5Z9 338 aa1.25□□□□□ -2.21
BRCA1-202ENST00000354071 TTC28Q96AY4 2481 aa1.24□□□□□ -2.21
BRCA1-202ENST00000354071 IGHV1OR21-1A0A087WYE8 117 aa1.24□□□□□ -2.21
BRCA1-202ENST00000354071 ZNF726A6NNF4 738 aa1.24□□□□□ -2.21
BRCA1-202ENST00000354071 HIDE1A8MVS5 230 aa1.24□□□□□ -2.21
BRCA1-202ENST00000354071 EEDO75530 441 aaKnown RBP1.24□□□□□ -2.21
BRCA1-202ENST00000354071 ERLIN2O94905 339 aa1.24□□□□□ -2.21
BRCA1-202ENST00000354071 FOLR2P14207 255 aa1.24□□□□□ -2.21
BRCA1-202ENST00000354071 MSR1P21757 451 aa1.24□□□□□ -2.21
BRCA1-202ENST00000354071 MAS1LP35410 378 aa1.24□□□□□ -2.21
BRCA1-202ENST00000354071 SLC26A3P40879 764 aa1.24□□□□□ -2.21
BRCA1-202ENST00000354071 CCR8P51685 355 aa1.24□□□□□ -2.21
BRCA1-202ENST00000354071 ZNF33AQ06730 810 aa1.24□□□□□ -2.21
BRCA1-202ENST00000354071 TRDNQ13061 729 aa1.24□□□□□ -2.21
BRCA1-202ENST00000354071 MADCAM1Q13477 382 aa1.24□□□□□ -2.21
BRCA1-202ENST00000354071 ASAH1Q13510 395 aa1.24□□□□□ -2.21
BRCA1-202ENST00000354071 MARCH8Q5T0T0 291 aa1.24□□□□□ -2.21
BRCA1-202ENST00000354071 BHLHA9Q7RTU4 235 aa1.24□□□□□ -2.21
BRCA1-202ENST00000354071 ZNF589Q86UQ0 364 aaPredicted RBP1.24□□□□□ -2.21
BRCA1-202ENST00000354071 GPR26Q8NDV2 337 aa1.24□□□□□ -2.21
BRCA1-202ENST00000354071 OR5K2Q8NHB8 316 aa1.24□□□□□ -2.21
BRCA1-202ENST00000354071 LRRC20Q8TCA0 184 aa1.24□□□□□ -2.21
BRCA1-202ENST00000354071 NAT6Q93015 286 aa1.24□□□□□ -2.21
BRCA1-202ENST00000354071 ZNF75AQ96N20 296 aa1.24□□□□□ -2.21
BRCA1-202ENST00000354071 ZNF578Q96N58 590 aaPredicted RBP1.24□□□□□ -2.21
BRCA1-202ENST00000354071 SOSTQ9BQB4 213 aa1.24□□□□□ -2.21
BRCA1-202ENST00000354071 LRRC61Q9BV99 259 aa1.24□□□□□ -2.21
BRCA1-202ENST00000354071 PITPNM3Q9BZ71 974 aa1.24□□□□□ -2.21
BRCA1-202ENST00000354071 C1orf198Q9H425 327 aa1.24□□□□□ -2.21
BRCA1-202ENST00000354071 ZNF385DQ9H6B1 395 aa1.24□□□□□ -2.21
BRCA1-202ENST00000354071 TMEM165Q9HC07 324 aa1.24□□□□□ -2.21
BRCA1-202ENST00000354071 ZNF302Q9NR11 478 aa1.24□□□□□ -2.21
BRCA1-202ENST00000354071 HRASLS2Q9NWW9 162 aa1.24□□□□□ -2.21
BRCA1-202ENST00000354071 NOTCH2Q04721 2471 aa1.24□□□□□ -2.21
BRCA1-202ENST00000354071 WDFY4Q6ZS81 3184 aa1.24□□□□□ -2.21
BRCA1-202ENST00000354071 ITSN1Q15811 1721 aa1.24□□□□□ -2.21
BRCA1-202ENST00000354071 TEX15Q9BXT5 2789 aa1.24□□□□□ -2.21
BRCA1-202ENST00000354071 PCNX3Q9H6A9 2034 aa1.24□□□□□ -2.21
BRCA1-202ENST00000354071 IGHV1OR15-1A0A075B7D0 117 aa1.24□□□□□ -2.21
BRCA1-202ENST00000354071 IQCMA0A1B0GVH7 501 aa1.24□□□□□ -2.21
BRCA1-202ENST00000354071 TMEM120BA0PK00 339 aa1.24□□□□□ -2.21
BRCA1-202ENST00000354071 RAB19A4D1S5 217 aa1.24□□□□□ -2.21
BRCA1-202ENST00000354071 MGAT4DA6NG13 374 aa1.24□□□□□ -2.21
BRCA1-202ENST00000354071 VGLL3A8MV65 326 aa1.24□□□□□ -2.21
BRCA1-202ENST00000354071 H3BQV1 296 aa1.24□□□□□ -2.21
BRCA1-202ENST00000354071 M0QXV9 152 aa1.24□□□□□ -2.21
BRCA1-202ENST00000354071 MOSP00540 346 aa1.24□□□□□ -2.21
BRCA1-202ENST00000354071 CATP04040 527 aaKnown RBP1.24□□□□□ -2.21
BRCA1-202ENST00000354071 ALDOBP05062 364 aa1.24□□□□□ -2.21
BRCA1-202ENST00000354071 GLAP06280 429 aa1.24□□□□□ -2.21
BRCA1-202ENST00000354071 KLK1P06870 262 aa1.24□□□□□ -2.21
BRCA1-202ENST00000354071 GGT1P19440 569 aa1.24□□□□□ -2.21
BRCA1-202ENST00000354071 ELK3P41970 407 aa1.24□□□□□ -2.21
BRCA1-202ENST00000354071 CX3CR1P49238 355 aa1.24□□□□□ -2.21
BRCA1-202ENST00000354071 MRPL19P49406 292 aaKnown RBP1.24□□□□□ -2.21
BRCA1-202ENST00000354071 OR2B6P58173 313 aa1.24□□□□□ -2.21
BRCA1-202ENST00000354071 NUTF2P61970 127 aaKnown RBP1.24□□□□□ -2.21
BRCA1-202ENST00000354071 PAX8Q06710 450 aa1.24□□□□□ -2.21
BRCA1-202ENST00000354071 CYTH1Q15438 398 aa1.24□□□□□ -2.21
BRCA1-202ENST00000354071 TGIF1Q15583 401 aa1.24□□□□□ -2.21
BRCA1-202ENST00000354071 PARP15Q460N3 678 aa1.24□□□□□ -2.21
BRCA1-202ENST00000354071 PAN3Q58A45 887 aaKnown RBP1.24□□□□□ -2.21
BRCA1-202ENST00000354071 KLF17Q5JT82 389 aaPredicted RBP1.24□□□□□ -2.21
BRCA1-202ENST00000354071 LCE1FQ5T754 118 aa1.24□□□□□ -2.21
BRCA1-202ENST00000354071 PDPK2PQ6A1A2 396 aa1.24□□□□□ -2.21
BRCA1-202ENST00000354071 ZNF544Q6NX49 715 aa1.24□□□□□ -2.21
BRCA1-202ENST00000354071 COPS6Q7L5N1 327 aa1.24□□□□□ -2.21
BRCA1-202ENST00000354071 SSX9Q7RTT3 188 aa1.24□□□□□ -2.21
BRCA1-202ENST00000354071 ZNF329Q86UD4 541 aa1.24□□□□□ -2.21
BRCA1-202ENST00000354071 NRMQ8IXM6 262 aa1.24□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms