RNA–Protein interactions for RNA: ENST00000353411.10

SKP1-202, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SKP1, Length 9,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-202ENST00000353411 EMP2P54851 167 aa4.62□□□□□ -1.67
SKP1-202ENST00000353411 PYCR3Q53H96 274 aa4.62□□□□□ -1.67
SKP1-202ENST00000353411 C12orf73Q69YU5 71 aa4.62□□□□□ -1.67
SKP1-202ENST00000353411 BCDIN3DQ7Z5W3 292 aaKnown RBP4.62□□□□□ -1.67
SKP1-202ENST00000353411 LGI3Q8N145 548 aa4.62□□□□□ -1.67
SKP1-202ENST00000353411 CYB561A3Q8NBI2 242 aa4.62□□□□□ -1.67
SKP1-202ENST00000353411 SLC38A9Q8NBW4 561 aa4.62□□□□□ -1.67
SKP1-202ENST00000353411 THAP3Q8WTV1 239 aaPredicted RBP4.62□□□□□ -1.67
SKP1-202ENST00000353411 CRYGNQ8WXF5 182 aa4.62□□□□□ -1.67
SKP1-202ENST00000353411 TLNRD1Q9H1K6 362 aa4.62□□□□□ -1.67
SKP1-202ENST00000353411 Q9N2J8 555 aa4.62□□□□□ -1.67
SKP1-202ENST00000353411 DOK5Q9P104 306 aa4.62□□□□□ -1.67
SKP1-202ENST00000353411 ADAM29Q9UKF5 820 aa4.62□□□□□ -1.67
SKP1-202ENST00000353411 PPP1R3CQ9UQK1 317 aa4.62□□□□□ -1.67
SKP1-202ENST00000353411 SCN11AQ9UI33 1791 aa4.62□□□□□ -1.67
SKP1-202ENST00000353411 A6NDN8 102 aa4.62□□□□□ -1.67
SKP1-202ENST00000353411 TRDCB7Z8K6 153 aa4.62□□□□□ -1.67
SKP1-202ENST00000353411 DUS4LO95620 317 aaKnown RBP4.62□□□□□ -1.67
SKP1-202ENST00000353411 CD3DP04234 171 aa4.62□□□□□ -1.67
SKP1-202ENST00000353411 HOXA9P31269 272 aa4.62□□□□□ -1.67
SKP1-202ENST00000353411 SLC6A9P48067 706 aa4.62□□□□□ -1.67
SKP1-202ENST00000353411 RAB7AP51149 207 aa4.62□□□□□ -1.67
SKP1-202ENST00000353411 ENTPD8Q5MY95 495 aa4.62□□□□□ -1.67
SKP1-202ENST00000353411 PSAPL1Q6NUJ1 521 aa4.62□□□□□ -1.67
SKP1-202ENST00000353411 RABEPKQ7Z6M1 372 aa4.62□□□□□ -1.67
SKP1-202ENST00000353411 BEND2Q8NDZ0 799 aa4.62□□□□□ -1.67
SKP1-202ENST00000353411 OR6K2Q8NGY2 324 aa4.62□□□□□ -1.67
SKP1-202ENST00000353411 NUBPLQ8TB37 319 aa4.62□□□□□ -1.67
SKP1-202ENST00000353411 TOMM40LQ969M1 308 aa4.62□□□□□ -1.67
SKP1-202ENST00000353411 NEURL3Q96EH8 262 aa4.62□□□□□ -1.67
SKP1-202ENST00000353411 PIK3IP1Q96FE7 263 aa4.62□□□□□ -1.67
SKP1-202ENST00000353411 MACROD1Q9BQ69 325 aa4.62□□□□□ -1.67
SKP1-202ENST00000353411 SPATC1LQ9H0A9 340 aa4.62□□□□□ -1.67
SKP1-202ENST00000353411 PLEKHJ1Q9NW61 149 aa4.62□□□□□ -1.67
SKP1-202ENST00000353411 YTHDF2Q9Y5A9 579 aaKnown RBP4.62□□□□□ -1.67
SKP1-202ENST00000353411 B4GALT3O60512 393 aa4.62□□□□□ -1.67
SKP1-202ENST00000353411 MMP2P08253 660 aa4.62□□□□□ -1.67
SKP1-202ENST00000353411 PTNP21246 168 aa4.62□□□□□ -1.67
SKP1-202ENST00000353411 KLF3P57682 345 aaPredicted RBP4.62□□□□□ -1.67
SKP1-202ENST00000353411 GUCA2AQ02747 115 aa4.62□□□□□ -1.67
SKP1-202ENST00000353411 PRSS54Q6PEW0 395 aa4.62□□□□□ -1.67
SKP1-202ENST00000353411 C16orf54Q6UWD8 224 aa4.62□□□□□ -1.67
SKP1-202ENST00000353411 ZSCAN4Q8NAM6 433 aaPredicted RBP4.62□□□□□ -1.67
SKP1-202ENST00000353411 NUDT11Q96G61 164 aa4.62□□□□□ -1.67
SKP1-202ENST00000353411 LRRC3BQ96PB8 259 aa4.62□□□□□ -1.67
SKP1-202ENST00000353411 TNFSF18Q9UNG2 199 aa4.62□□□□□ -1.67
SKP1-202ENST00000353411 RBFOX3A6NFN3 312 aa4.62□□□□□ -1.67
SKP1-202ENST00000353411 A6NJY4 79 aa4.62□□□□□ -1.67
SKP1-202ENST00000353411 CYR61O00622 381 aa4.62□□□□□ -1.67
SKP1-202ENST00000353411 NDUFS4O43181 175 aa4.62□□□□□ -1.67
SKP1-202ENST00000353411 PLPP2O43688 288 aa4.62□□□□□ -1.67
SKP1-202ENST00000353411 SERPINE2P07093 398 aa4.62□□□□□ -1.67
SKP1-202ENST00000353411 JMJD7P0C870 316 aa4.62□□□□□ -1.67
SKP1-202ENST00000353411 CTSAP10619 480 aa4.62□□□□□ -1.67
SKP1-202ENST00000353411 KLF9Q13886 244 aaPredicted RBP4.62□□□□□ -1.67
SKP1-202ENST00000353411 NECAP1Q8NC96 275 aa4.62□□□□□ -1.67
SKP1-202ENST00000353411 EMG1Q92979 244 aaKnown RBP4.62□□□□□ -1.67
SKP1-202ENST00000353411 ALKBH7Q9BT30 221 aaPredicted RBP4.62□□□□□ -1.67
SKP1-202ENST00000353411 FAM103A1Q9BTL3 118 aaKnown RBP4.62□□□□□ -1.67
SKP1-202ENST00000353411 SLC46A2Q9BY10 475 aa4.62□□□□□ -1.67
SKP1-202ENST00000353411 HEBP2Q9Y5Z4 205 aa4.62□□□□□ -1.67
SKP1-202ENST00000353411 C11orf97A0A1B0GVM6 126 aaPredicted RBP4.61□□□□□ -1.67
SKP1-202ENST00000353411 MYBPHLA2RUH7 354 aa4.61□□□□□ -1.67
SKP1-202ENST00000353411 TP53I11O14683 189 aa4.61□□□□□ -1.67
SKP1-202ENST00000353411 MPIG6BO95866 241 aa4.61□□□□□ -1.67
SKP1-202ENST00000353411 HOXA5P20719 270 aa4.61□□□□□ -1.67
SKP1-202ENST00000353411 SLC6A11P48066 632 aa4.61□□□□□ -1.67
SKP1-202ENST00000353411 SLC11A1P49279 550 aa4.61□□□□□ -1.67
SKP1-202ENST00000353411 DHODHQ02127 395 aa4.61□□□□□ -1.67
SKP1-202ENST00000353411 ZNF90Q03938 601 aa4.61□□□□□ -1.67
SKP1-202ENST00000353411 FFAR4Q5NUL3 377 aa4.61□□□□□ -1.67
SKP1-202ENST00000353411 FAAP20Q6NZ36 180 aa4.61□□□□□ -1.67
SKP1-202ENST00000353411 ZNF761Q86XN6 746 aaPredicted RBP4.61□□□□□ -1.67
SKP1-202ENST00000353411 ETFBKMTQ8IXQ9 262 aa4.61□□□□□ -1.67
SKP1-202ENST00000353411 OR5AU1Q8NGC0 362 aa4.61□□□□□ -1.67
SKP1-202ENST00000353411 KCNG3Q8TAE7 436 aa4.61□□□□□ -1.67
SKP1-202ENST00000353411 NTNG2Q96CW9 530 aa4.61□□□□□ -1.67
SKP1-202ENST00000353411 TSSK2Q96PF2 358 aa4.61□□□□□ -1.67
SKP1-202ENST00000353411 PTPN18Q99952 460 aa4.61□□□□□ -1.67
SKP1-202ENST00000353411 DEFB129Q9H1M3 183 aa4.61□□□□□ -1.67
SKP1-202ENST00000353411 SRA1Q9HD15 236 aaKnown RBP4.61□□□□□ -1.67
SKP1-202ENST00000353411 FTSJ1Q9UET6 329 aa4.61□□□□□ -1.67
SKP1-202ENST00000353411 B3GALT5Q9Y2C3 310 aa4.61□□□□□ -1.67
SKP1-202ENST00000353411 AMDHD2Q9Y303 409 aa4.61□□□□□ -1.67
SKP1-202ENST00000353411 PEX12O00623 359 aa4.61□□□□□ -1.67
SKP1-202ENST00000353411 ZNF749O43361 778 aa4.61□□□□□ -1.67
SKP1-202ENST00000353411 ZNF28P17035 718 aa4.61□□□□□ -1.67
SKP1-202ENST00000353411 PGCP20142 388 aa4.61□□□□□ -1.67
SKP1-202ENST00000353411 CHRNB4P30926 498 aa4.61□□□□□ -1.67
SKP1-202ENST00000353411 ACAA2P42765 397 aaKnown RBP4.61□□□□□ -1.67
SKP1-202ENST00000353411 SNRPNP63162 240 aaKnown RBP4.61□□□□□ -1.67
SKP1-202ENST00000353411 GPNMBQ14956 572 aa4.61□□□□□ -1.67
SKP1-202ENST00000353411 EXOSC6Q5RKV6 272 aaKnown RBP4.61□□□□□ -1.67
SKP1-202ENST00000353411 STUMQ69YW2 141 aa4.61□□□□□ -1.67
SKP1-202ENST00000353411 OR11H4Q8NGC9 324 aa4.61□□□□□ -1.67
SKP1-202ENST00000353411 LMX1AQ8TE12 382 aa4.61□□□□□ -1.67
SKP1-202ENST00000353411 ZNF681Q96N22 645 aa4.61□□□□□ -1.67
SKP1-202ENST00000353411 SLC22A12Q96S37 553 aa4.61□□□□□ -1.67
SKP1-202ENST00000353411 ZNF331Q9NQX6 463 aaPredicted RBP4.61□□□□□ -1.67
SKP1-202ENST00000353411 ZNF107Q9UII5 783 aaPredicted RBP4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms