RNA–Protein interactions for RNA: ENST00000353317.9

TRIM55-204, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 2,624 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-204ENST00000353317 SESN1Q9Y6P5 492 aa7.71□□□□□ -1.18
TRIM55-204ENST00000353317 LOC102723996A0A087X1L8 192 aa7.7□□□□□ -1.18
TRIM55-204ENST00000353317 IGHV1-45A0A0A0MS14 117 aa7.7□□□□□ -1.18
TRIM55-204ENST00000353317 GGT3PA6NGU5 568 aa7.7□□□□□ -1.18
TRIM55-204ENST00000353317 KRBOX1C9JBD0 128 aa7.7□□□□□ -1.18
TRIM55-204ENST00000353317 GOSR2O14653 212 aa7.7□□□□□ -1.18
TRIM55-204ENST00000353317 CTAG2O75638 210 aa7.7□□□□□ -1.18
TRIM55-204ENST00000353317 SNAPC5O75971 98 aa7.7□□□□□ -1.18
TRIM55-204ENST00000353317 FGF2P09038 288 aa7.7□□□□□ -1.18
TRIM55-204ENST00000353317 COX6A1P12074 109 aa7.7□□□□□ -1.18
TRIM55-204ENST00000353317 PPP3CBP16298 524 aa7.7□□□□□ -1.18
TRIM55-204ENST00000353317 SKP2Q13309 424 aa7.7□□□□□ -1.18
TRIM55-204ENST00000353317 SLC29A4Q7RTT9 530 aa7.7□□□□□ -1.18
TRIM55-204ENST00000353317 JAZF1Q86VZ6 243 aa7.7□□□□□ -1.18
TRIM55-204ENST00000353317 LSM14AQ8ND56 463 aaKnown RBP7.7□□□□□ -1.18
TRIM55-204ENST00000353317 OR51D1Q8NGF3 324 aa7.7□□□□□ -1.18
TRIM55-204ENST00000353317 OR51S1Q8NGJ8 323 aa7.7□□□□□ -1.18
TRIM55-204ENST00000353317 OR1S1Q8NH92 325 aa7.7□□□□□ -1.18
TRIM55-204ENST00000353317 CT55Q8WUE5 264 aa7.7□□□□□ -1.18
TRIM55-204ENST00000353317 LIN37Q96GY3 246 aaPredicted RBP7.7□□□□□ -1.18
TRIM55-204ENST00000353317 IMMP1LQ96LU5 166 aa7.7□□□□□ -1.18
TRIM55-204ENST00000353317 CHST6Q9GZX3 395 aa7.7□□□□□ -1.18
TRIM55-204ENST00000353317 KCNK15Q9H427 330 aa7.7□□□□□ -1.18
TRIM55-204ENST00000353317 PFDN2Q9UHV9 154 aa7.7□□□□□ -1.18
TRIM55-204ENST00000353317 IKZF2Q9UKS7 526 aa7.7□□□□□ -1.18
TRIM55-204ENST00000353317 HIF3AQ9Y2N7 669 aa7.7□□□□□ -1.18
TRIM55-204ENST00000353317 MRPS18BQ9Y676 258 aaKnown RBP7.7□□□□□ -1.18
TRIM55-204ENST00000353317 DMXL2Q8TDJ6 3036 aa7.7□□□□□ -1.18
TRIM55-204ENST00000353317 OR4C45A6NMZ5 311 aa7.7□□□□□ -1.18
TRIM55-204ENST00000353317 ATP6V1G2-DDX39BF2Z307 99 aa7.7□□□□□ -1.18
TRIM55-204ENST00000353317 F5H5P2 479 aa7.7□□□□□ -1.18
TRIM55-204ENST00000353317 NUPL2O15504 423 aaKnown RBP7.7□□□□□ -1.18
TRIM55-204ENST00000353317 FADS1O60427 444 aa7.7□□□□□ -1.18
TRIM55-204ENST00000353317 DKK1O94907 266 aa7.7□□□□□ -1.18
TRIM55-204ENST00000353317 KDM4BO94953 1096 aa7.7□□□□□ -1.18
TRIM55-204ENST00000353317 CD14P08571 375 aa7.7□□□□□ -1.18
TRIM55-204ENST00000353317 JMJD7P0C870 316 aa7.7□□□□□ -1.18
TRIM55-204ENST00000353317 NAT1P18440 290 aa7.7□□□□□ -1.18
TRIM55-204ENST00000353317 TCN2P20062 427 aa7.7□□□□□ -1.18
TRIM55-204ENST00000353317 FAUP35544 74 aaKnown RBP7.7□□□□□ -1.18
TRIM55-204ENST00000353317 NBL1P41271 181 aa7.7□□□□□ -1.18
TRIM55-204ENST00000353317 CTXN1P60606 82 aa7.7□□□□□ -1.18
TRIM55-204ENST00000353317 ZNF117Q03924 483 aa7.7□□□□□ -1.18
TRIM55-204ENST00000353317 PLCXD2Q0VAA5 305 aa7.7□□□□□ -1.18
TRIM55-204ENST00000353317 Q0VFX4 171 aa7.7□□□□□ -1.18
TRIM55-204ENST00000353317 INPP5JQ15735 1006 aaPredicted RBP7.7□□□□□ -1.18
TRIM55-204ENST00000353317 ZNF660Q6AZW8 331 aaPredicted RBP7.7□□□□□ -1.18
TRIM55-204ENST00000353317 ANKRD16Q6P6B7 361 aa7.7□□□□□ -1.18
TRIM55-204ENST00000353317 LRRN1Q6UXK5 716 aa7.7□□□□□ -1.18
TRIM55-204ENST00000353317 TFAP2EQ6VUC0 442 aa7.7□□□□□ -1.18
TRIM55-204ENST00000353317 DPY19L4Q7Z388 723 aa7.7□□□□□ -1.18
TRIM55-204ENST00000353317 CDC20BQ86Y33 519 aa7.7□□□□□ -1.18
TRIM55-204ENST00000353317 PRSS35Q8N3Z0 413 aa7.7□□□□□ -1.18
TRIM55-204ENST00000353317 LRRC75AQ8NAA5 344 aa7.7□□□□□ -1.18
TRIM55-204ENST00000353317 BVESQ8NE79 360 aa7.7□□□□□ -1.18
TRIM55-204ENST00000353317 OR2Y1Q8NGV0 311 aa7.7□□□□□ -1.18
TRIM55-204ENST00000353317 OR6N1Q8NGY5 312 aa7.7□□□□□ -1.18
TRIM55-204ENST00000353317 OR2G2Q8NGZ5 317 aa7.7□□□□□ -1.18
TRIM55-204ENST00000353317 PHOSPHO1Q8TCT1 267 aa7.7□□□□□ -1.18
TRIM55-204ENST00000353317 ELP5Q8TE02 316 aa7.7□□□□□ -1.18
TRIM55-204ENST00000353317 RELTQ969Z4 430 aa7.7□□□□□ -1.18
TRIM55-204ENST00000353317 TAAR9Q96RI9 348 aa7.7□□□□□ -1.18
TRIM55-204ENST00000353317 LPAR4Q99677 370 aa7.7□□□□□ -1.18
TRIM55-204ENST00000353317 CDC6Q99741 560 aa7.7□□□□□ -1.18
TRIM55-204ENST00000353317 B3GNT4Q9C0J1 378 aa7.7□□□□□ -1.18
TRIM55-204ENST00000353317 WDR76Q9H967 626 aa7.7□□□□□ -1.18
TRIM55-204ENST00000353317 MED11Q9P086 117 aa7.7□□□□□ -1.18
TRIM55-204ENST00000353317 STEAP1Q9UHE8 339 aa7.7□□□□□ -1.18
TRIM55-204ENST00000353317 GPR160Q9UJ42 338 aa7.7□□□□□ -1.18
TRIM55-204ENST00000353317 MOKQ9UQ07 419 aa7.7□□□□□ -1.18
TRIM55-204ENST00000353317 MGAQ8IWI9 3026 aa7.7□□□□□ -1.18
TRIM55-204ENST00000353317 PRRC2CQ9Y520 2896 aaKnown RBP7.7□□□□□ -1.18
TRIM55-204ENST00000353317 NCKAP5O14513 1909 aa7.7□□□□□ -1.18
TRIM55-204ENST00000353317 TRBV5-7A0A0A0MS05 114 aa7.69□□□□□ -1.18
TRIM55-204ENST00000353317 ZNF254O75437 659 aa7.69□□□□□ -1.18
TRIM55-204ENST00000353317 TSPAN9O75954 239 aa7.69□□□□□ -1.18
TRIM55-204ENST00000353317 OR2J2O76002 312 aa7.69□□□□□ -1.18
TRIM55-204ENST00000353317 GPANK1O95872 356 aa7.69□□□□□ -1.18
TRIM55-204ENST00000353317 ITGA5P08648 1049 aa7.69□□□□□ -1.18
TRIM55-204ENST00000353317 SDHAP31040 664 aa7.69□□□□□ -1.18
TRIM55-204ENST00000353317 SLC25A1P53007 311 aa7.69□□□□□ -1.18
TRIM55-204ENST00000353317 GK2Q14410 553 aaPredicted RBP7.69□□□□□ -1.18
TRIM55-204ENST00000353317 ZNF273Q14593 569 aa7.69□□□□□ -1.18
TRIM55-204ENST00000353317 ZNF74Q16587 644 aa7.69□□□□□ -1.18
TRIM55-204ENST00000353317 ALG10Q5BKT4 473 aa7.69□□□□□ -1.18
TRIM55-204ENST00000353317 HLA-DQA1Q5Y7H0 255 aa7.69□□□□□ -1.18
TRIM55-204ENST00000353317 ZNF227Q86WZ6 799 aa7.69□□□□□ -1.18
TRIM55-204ENST00000353317 C10orf53Q8N6V4 93 aa7.69□□□□□ -1.18
TRIM55-204ENST00000353317 ZNF676Q8N7Q3 588 aa7.69□□□□□ -1.18
TRIM55-204ENST00000353317 OR5M9Q8NGP3 310 aa7.69□□□□□ -1.18
TRIM55-204ENST00000353317 STK35Q8TDR2 534 aa7.69□□□□□ -1.18
TRIM55-204ENST00000353317 TNFAIP8L1Q8WVP5 186 aa7.69□□□□□ -1.18
TRIM55-204ENST00000353317 DVL3Q92997 716 aaPredicted RBP7.69□□□□□ -1.18
TRIM55-204ENST00000353317 DNAJA3Q96EY1 480 aa7.69□□□□□ -1.18
TRIM55-204ENST00000353317 NKX3-1Q99801 234 aaPredicted RBP7.69□□□□□ -1.18
TRIM55-204ENST00000353317 LAMP5Q9UJQ1 280 aa7.69□□□□□ -1.18
TRIM55-204ENST00000353317 FBXL2Q9UKC9 423 aa7.69□□□□□ -1.18
TRIM55-204ENST00000353317 PADI1Q9ULC6 663 aa7.69□□□□□ -1.18
TRIM55-204ENST00000353317 BOD1L1Q8NFC6 3051 aa7.69□□□□□ -1.18
TRIM55-204ENST00000353317 ELOA3DA6NLF2 546 aaPredicted RBP7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms