RNA–Protein interactions for RNA: ENST00000351808.9

IFT88-202, Transcript of intraflagellar transport 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IFT88, Length 2,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-202ENST00000351808 ZNF587Q96SQ5 575 aaPredicted RBP11.95□□□□□ -0.5
IFT88-202ENST00000351808 INTS14Q96SY0 518 aa11.95□□□□□ -0.5
IFT88-202ENST00000351808 CDC6Q99741 560 aa11.95□□□□□ -0.5
IFT88-202ENST00000351808 PTPN18Q99952 460 aa11.95□□□□□ -0.5
IFT88-202ENST00000351808 SRMSQ9H3Y6 488 aa11.95□□□□□ -0.5
IFT88-202ENST00000351808 MARCH5Q9NX47 278 aa11.95□□□□□ -0.5
IFT88-202ENST00000351808 KLK13Q9UKR3 277 aa11.95□□□□□ -0.5
IFT88-202ENST00000351808 HEATR5AQ86XA9 2040 aa11.95□□□□□ -0.5
IFT88-202ENST00000351808 A6NNC1 897 aa11.95□□□□□ -0.5
IFT88-202ENST00000351808 ZNF354AO60765 605 aaPredicted RBP11.95□□□□□ -0.5
IFT88-202ENST00000351808 STATHP02808 62 aa11.95□□□□□ -0.5
IFT88-202ENST00000351808 CSTBP04080 98 aaKnown RBP11.95□□□□□ -0.5
IFT88-202ENST00000351808 S1PR1P21453 382 aa11.95□□□□□ -0.5
IFT88-202ENST00000351808 CX3CR1P49238 355 aa11.95□□□□□ -0.5
IFT88-202ENST00000351808 ERVFRD-1P60508 538 aa11.95□□□□□ -0.5
IFT88-202ENST00000351808 C17orf64Q86WR6 236 aa11.95□□□□□ -0.5
IFT88-202ENST00000351808 OR9A1PQ8NGU1 263 aa11.95□□□□□ -0.5
IFT88-202ENST00000351808 FRZBQ92765 325 aa11.95□□□□□ -0.5
IFT88-202ENST00000351808 SLC35B3Q9H1N7 401 aa11.95□□□□□ -0.5
IFT88-202ENST00000351808 CHRNA9Q9UGM1 479 aa11.95□□□□□ -0.5
IFT88-202ENST00000351808 ZNF346Q9UL40 294 aaKnown RBP11.95□□□□□ -0.5
IFT88-202ENST00000351808 ANAPC1Q9H1A4 1944 aa11.94□□□□□ -0.5
IFT88-202ENST00000351808 ALPK2Q86TB3 2170 aa11.94□□□□□ -0.5
IFT88-202ENST00000351808 A0A0G2JLL6 359 aaPredicted RBP11.94□□□□□ -0.5
IFT88-202ENST00000351808 STK17BO94768 372 aa11.94□□□□□ -0.5
IFT88-202ENST00000351808 MC3RP41968 323 aa11.94□□□□□ -0.5
IFT88-202ENST00000351808 DIO1P49895 249 aa11.94□□□□□ -0.5
IFT88-202ENST00000351808 MRPS6P82932 125 aaKnown RBP11.94□□□□□ -0.5
IFT88-202ENST00000351808 TMEM220Q6QAJ8 160 aa11.94□□□□□ -0.5
IFT88-202ENST00000351808 PRRT2Q7Z6L0 340 aaPredicted RBP11.94□□□□□ -0.5
IFT88-202ENST00000351808 DCAF4L2Q8NA75 395 aa11.94□□□□□ -0.5
IFT88-202ENST00000351808 NUP43Q8NFH3 380 aa11.94□□□□□ -0.5
IFT88-202ENST00000351808 OR9K2Q8NGE7 335 aa11.94□□□□□ -0.5
IFT88-202ENST00000351808 MRGPRX3Q96LB0 322 aa11.94□□□□□ -0.5
IFT88-202ENST00000351808 SLC25A31Q9H0C2 315 aa11.94□□□□□ -0.5
IFT88-202ENST00000351808 PDE7BQ9NP56 450 aa11.94□□□□□ -0.5
IFT88-202ENST00000351808 MED31Q9Y3C7 131 aa11.94□□□□□ -0.5
IFT88-202ENST00000351808 LOC100289279A0A1B0GTE1 492 aa11.94□□□□□ -0.5
IFT88-202ENST00000351808 FHITP49789 147 aa11.94□□□□□ -0.5
IFT88-202ENST00000351808 TDGF1P3P51864 188 aa11.94□□□□□ -0.5
IFT88-202ENST00000351808 SCAND1P57086 179 aa11.94□□□□□ -0.5
IFT88-202ENST00000351808 MRPS11P82912 194 aaKnown RBP11.94□□□□□ -0.5
IFT88-202ENST00000351808 RAB32Q13637 225 aa11.94□□□□□ -0.5
IFT88-202ENST00000351808 PRAMEF14Q5SWL7 426 aa11.94□□□□□ -0.5
IFT88-202ENST00000351808 DMRTA1Q5VZB9 504 aa11.94□□□□□ -0.5
IFT88-202ENST00000351808 ARHGAP11AQ6P4F7 1023 aa11.94□□□□□ -0.5
IFT88-202ENST00000351808 UBE3DQ7Z6J8 389 aa11.94□□□□□ -0.5
IFT88-202ENST00000351808 NPRL2Q8WTW4 380 aa11.94□□□□□ -0.5
IFT88-202ENST00000351808 CNRIP1Q96F85 164 aaPredicted RBP11.94□□□□□ -0.5
IFT88-202ENST00000351808 SLC35A4Q96G79 324 aa11.94□□□□□ -0.5
IFT88-202ENST00000351808 PRRT1Q99946 306 aa11.94□□□□□ -0.5
IFT88-202ENST00000351808 SMIM3Q9BZL3 60 aa11.94□□□□□ -0.5
IFT88-202ENST00000351808 IER3IP1Q9Y5U9 82 aa11.94□□□□□ -0.5
IFT88-202ENST00000351808 TRBV5-5A0A0J9YX44 114 aa11.93□□□□□ -0.5
IFT88-202ENST00000351808 MED19A0JLT2 244 aaPredicted RBP11.93□□□□□ -0.5
IFT88-202ENST00000351808 AIFM1O95831 613 aa11.93□□□□□ -0.5
IFT88-202ENST00000351808 SLC35G4P0C7Q5 338 aa11.93□□□□□ -0.5
IFT88-202ENST00000351808 TACR3P29371 465 aa11.93□□□□□ -0.5
IFT88-202ENST00000351808 RAB11BQ15907 218 aa11.93□□□□□ -0.5
IFT88-202ENST00000351808 SLC22A6Q4U2R8 563 aa11.93□□□□□ -0.5
IFT88-202ENST00000351808 TMEM268Q5VZI3 342 aa11.93□□□□□ -0.5
IFT88-202ENST00000351808 ZNF584Q8IVC4 421 aa11.93□□□□□ -0.5
IFT88-202ENST00000351808 OR13C9Q8NGT0 318 aa11.93□□□□□ -0.5
IFT88-202ENST00000351808 ZNF417Q8TAU3 575 aa11.93□□□□□ -0.5
IFT88-202ENST00000351808 FAM174AQ8TBP5 190 aa11.93□□□□□ -0.5
IFT88-202ENST00000351808 ZPLD1Q8TCW7 415 aa11.93□□□□□ -0.5
IFT88-202ENST00000351808 DTD2Q96FN9 168 aa11.93□□□□□ -0.5
IFT88-202ENST00000351808 PRAP1Q96NZ9 151 aa11.93□□□□□ -0.5
IFT88-202ENST00000351808 OR2M4Q96R27 311 aa11.93□□□□□ -0.5
IFT88-202ENST00000351808 GAL3ST4Q96RP7 486 aa11.93□□□□□ -0.5
IFT88-202ENST00000351808 NMNAT3Q96T66 252 aa11.93□□□□□ -0.5
IFT88-202ENST00000351808 CBLN4Q9NTU7 201 aa11.93□□□□□ -0.5
IFT88-202ENST00000351808 DOCK3Q8IZD9 2030 aa11.93□□□□□ -0.5
IFT88-202ENST00000351808 M0R143 59 aa11.93□□□□□ -0.5
IFT88-202ENST00000351808 S100A10P60903 97 aa11.93□□□□□ -0.5
IFT88-202ENST00000351808 GGTLC2Q14390 218 aa11.93□□□□□ -0.5
IFT88-202ENST00000351808 GAS6Q14393 721 aa11.93□□□□□ -0.5
IFT88-202ENST00000351808 SOHLH1Q5JUK2 328 aa11.93□□□□□ -0.5
IFT88-202ENST00000351808 TMEM64Q6YI46 380 aa11.93□□□□□ -0.5
IFT88-202ENST00000351808 HSD11B1LQ7Z5J1 315 aa11.93□□□□□ -0.5
IFT88-202ENST00000351808 ZNF761Q86XN6 746 aaPredicted RBP11.93□□□□□ -0.5
IFT88-202ENST00000351808 SLC16A11Q8NCK7 471 aa11.93□□□□□ -0.5
IFT88-202ENST00000351808 OR2AP1Q8NGE2 309 aa11.93□□□□□ -0.5
IFT88-202ENST00000351808 OR56A1Q8NGH5 318 aa11.93□□□□□ -0.5
IFT88-202ENST00000351808 SFXN5Q8TD22 340 aa11.93□□□□□ -0.5
IFT88-202ENST00000351808 CASD1Q96PB1 797 aa11.93□□□□□ -0.5
IFT88-202ENST00000351808 CNTNAP3Q9BZ76 1288 aa11.93□□□□□ -0.5
IFT88-202ENST00000351808 NELFAQ9H3P2 528 aa11.93□□□□□ -0.5
IFT88-202ENST00000351808 PRDM7Q9NQW5 492 aa11.93□□□□□ -0.5
IFT88-202ENST00000351808 SLC38A8A6NNN8 435 aa11.93□□□□□ -0.5
IFT88-202ENST00000351808 LYPD3O95274 346 aa11.93□□□□□ -0.5
IFT88-202ENST00000351808 ELFN1P0C7U0 828 aa11.93□□□□□ -0.5
IFT88-202ENST00000351808 CD37P11049 281 aa11.93□□□□□ -0.5
IFT88-202ENST00000351808 SLC6A6P31641 620 aa11.93□□□□□ -0.5
IFT88-202ENST00000351808 TAGLN2P37802 199 aaKnown RBP11.93□□□□□ -0.5
IFT88-202ENST00000351808 MAPK8P45983 427 aa11.93□□□□□ -0.5
IFT88-202ENST00000351808 OR1G1P47890 313 aa11.93□□□□□ -0.5
IFT88-202ENST00000351808 MOGAT2Q3SYC2 334 aa11.93□□□□□ -0.5
IFT88-202ENST00000351808 AARDQ4LEZ3 155 aa11.93□□□□□ -0.5
IFT88-202ENST00000351808 APOBEC3FQ8IUX4 373 aaKnown RBP11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms