RNA–Protein interactions for RNA: ENST00000347617.10

HMGA1-202, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,773 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-202ENST00000347617 NUP54Q7Z3B4 507 aa14.28□□□□□ -0.12
HMGA1-202ENST00000347617 SFTPA2Q8IWL1 248 aa14.28□□□□□ -0.12
HMGA1-202ENST00000347617 OR4N5Q8IXE1 308 aa14.28□□□□□ -0.12
HMGA1-202ENST00000347617 TMEFF1Q8IYR6 380 aa14.28□□□□□ -0.12
HMGA1-202ENST00000347617 RCBTB1Q8NDN9 531 aa14.28□□□□□ -0.12
HMGA1-202ENST00000347617 ASB17Q8WXJ9 295 aa14.28□□□□□ -0.12
HMGA1-202ENST00000347617 DVL3Q92997 716 aaPredicted RBP14.28□□□□□ -0.12
HMGA1-202ENST00000347617 CTHRC1Q96CG8 243 aa14.28□□□□□ -0.12
HMGA1-202ENST00000347617 SLC41A2Q96JW4 573 aa14.28□□□□□ -0.12
HMGA1-202ENST00000347617 NMES1Q9C002 83 aa14.28□□□□□ -0.12
HMGA1-202ENST00000347617 METTL21EPA6NDL7 271 aa14.27□□□□□ -0.12
HMGA1-202ENST00000347617 UBE2CO00762 179 aa14.27□□□□□ -0.12
HMGA1-202ENST00000347617 GATCO43716 136 aaKnown RBP14.27□□□□□ -0.12
HMGA1-202ENST00000347617 EIF3GO75821 320 aaKnown RBP eCLIP14.27□□□□□ -0.127e-7■■□□□ 12.9
HMGA1-202ENST00000347617 ACTL6AO96019 429 aa14.27□□□□□ -0.12
HMGA1-202ENST00000347617 RENP00797 406 aa14.27□□□□□ -0.12
HMGA1-202ENST00000347617 PNMTP11086 282 aa14.27□□□□□ -0.12
HMGA1-202ENST00000347617 ALOX5APP20292 161 aa14.27□□□□□ -0.12
HMGA1-202ENST00000347617 MAOAP21397 527 aa14.27□□□□□ -0.12
HMGA1-202ENST00000347617 S100PP25815 95 aa14.27□□□□□ -0.12
HMGA1-202ENST00000347617 ARRB1P49407 418 aaPredicted RBP14.27□□□□□ -0.12
HMGA1-202ENST00000347617 ZXDAP98168 799 aa14.27□□□□□ -0.12
HMGA1-202ENST00000347617 MGAT2Q10469 447 aa14.27□□□□□ -0.12
HMGA1-202ENST00000347617 CDNFQ49AH0 187 aa14.27□□□□□ -0.12
HMGA1-202ENST00000347617 C14orf28Q4W4Y0 310 aa14.27□□□□□ -0.12
HMGA1-202ENST00000347617 ADGRE4PQ86SQ3 457 aa14.27□□□□□ -0.12
HMGA1-202ENST00000347617 WDR5BQ86VZ2 330 aa14.27□□□□□ -0.12
HMGA1-202ENST00000347617 ZNF584Q8IVC4 421 aa14.27□□□□□ -0.12
HMGA1-202ENST00000347617 MISPQ8IVT2 679 aa14.27□□□□□ -0.12
HMGA1-202ENST00000347617 ZNF614Q8N883 585 aa14.27□□□□□ -0.12
HMGA1-202ENST00000347617 C19orf47Q8N9M1 422 aaKnown RBP14.27□□□□□ -0.12
HMGA1-202ENST00000347617 TLNRD1Q9H1K6 362 aa14.27□□□□□ -0.12
HMGA1-202ENST00000347617 FKRPQ9H9S5 495 aa14.27□□□□□ -0.12
HMGA1-202ENST00000347617 OR10H1Q9Y4A9 318 aa14.27□□□□□ -0.12
HMGA1-202ENST00000347617 EYSQ5T1H1 3165 aa14.27□□□□□ -0.12
HMGA1-202ENST00000347617 C9orf170A2RU37 121 aa14.27□□□□□ -0.13
HMGA1-202ENST00000347617 ELOA3DA6NLF2 546 aaPredicted RBP14.27□□□□□ -0.13
HMGA1-202ENST00000347617 PSMD9O00233 223 aa14.27□□□□□ -0.13
HMGA1-202ENST00000347617 SGCEO43556 437 aa14.27□□□□□ -0.13
HMGA1-202ENST00000347617 SCGNO76038 276 aa14.27□□□□□ -0.13
HMGA1-202ENST00000347617 CD2P06729 351 aa14.27□□□□□ -0.13
HMGA1-202ENST00000347617 ITGA5P08648 1049 aa14.27□□□□□ -0.13
HMGA1-202ENST00000347617 ACAA1P09110 424 aaPredicted RBP14.27□□□□□ -0.13
HMGA1-202ENST00000347617 RAB6AP20340 208 aa14.27□□□□□ -0.13
HMGA1-202ENST00000347617 PTAFRP25105 342 aa14.27□□□□□ -0.13
HMGA1-202ENST00000347617 GRPRP30550 384 aa14.27□□□□□ -0.13
HMGA1-202ENST00000347617 CDKN2AP42771 156 aaKnown RBP14.27□□□□□ -0.13
HMGA1-202ENST00000347617 CSNK1EP49674 416 aaKnown RBP14.27□□□□□ -0.13
HMGA1-202ENST00000347617 SKP1P63208 163 aa14.27□□□□□ -0.13
HMGA1-202ENST00000347617 ADAM8P78325 824 aa14.27□□□□□ -0.13
HMGA1-202ENST00000347617 NR0B2Q15466 257 aa14.27□□□□□ -0.13
HMGA1-202ENST00000347617 ELOA3BQ3SY89 546 aa14.27□□□□□ -0.13
HMGA1-202ENST00000347617 CSNK1A1LQ8N752 337 aa14.27□□□□□ -0.13
HMGA1-202ENST00000347617 ZNF511Q8NB15 262 aa14.27□□□□□ -0.13
HMGA1-202ENST00000347617 ELOA3Q8NG57 546 aa14.27□□□□□ -0.13
HMGA1-202ENST00000347617 OR13C8Q8NGS7 320 aa14.27□□□□□ -0.13
HMGA1-202ENST00000347617 ZPLD1Q8TCW7 415 aa14.27□□□□□ -0.13
HMGA1-202ENST00000347617 PAQR8Q8TEZ7 354 aa14.27□□□□□ -0.13
HMGA1-202ENST00000347617 ZNF285Q96NJ3 590 aa14.27□□□□□ -0.13
HMGA1-202ENST00000347617 CMSS1Q9BQ75 279 aaKnown RBP14.27□□□□□ -0.13
HMGA1-202ENST00000347617 G6PC3Q9BUM1 346 aa14.27□□□□□ -0.13
HMGA1-202ENST00000347617 TINAGL1Q9GZM7 467 aaPredicted RBP14.27□□□□□ -0.13
HMGA1-202ENST00000347617 RCC2Q9P258 522 aaKnown RBP14.27□□□□□ -0.13
HMGA1-202ENST00000347617 KLHDC2Q9Y2U9 406 aa14.27□□□□□ -0.13
HMGA1-202ENST00000347617 WIF1Q9Y5W5 379 aa14.27□□□□□ -0.13
HMGA1-202ENST00000347617 SCN3AQ9NY46 2000 aa14.26□□□□□ -0.13
HMGA1-202ENST00000347617 MEX3AA1L020 520 aaKnown RBP14.26□□□□□ -0.13
HMGA1-202ENST00000347617 DUS4LO95620 317 aaKnown RBP14.26□□□□□ -0.13
HMGA1-202ENST00000347617 CRHP06850 196 aa14.26□□□□□ -0.13
HMGA1-202ENST00000347617 PVRP15151 417 aa14.26□□□□□ -0.13
HMGA1-202ENST00000347617 ST6GAL1P15907 406 aa14.26□□□□□ -0.13
HMGA1-202ENST00000347617 HTR2CP28335 458 aa14.26□□□□□ -0.13
HMGA1-202ENST00000347617 NPBWR1P48145 328 aa14.26□□□□□ -0.13
HMGA1-202ENST00000347617 KCNJ3P48549 501 aa14.26□□□□□ -0.13
HMGA1-202ENST00000347617 SMCO1Q147U7 214 aa14.26□□□□□ -0.13
HMGA1-202ENST00000347617 DEFB134Q4QY38 66 aa14.26□□□□□ -0.13
HMGA1-202ENST00000347617 RNASE10Q5GAN6 216 aaKnown RBP14.26□□□□□ -0.13
HMGA1-202ENST00000347617 PAPD4Q6PIY7 484 aaKnown RBP14.26□□□□□ -0.13
HMGA1-202ENST00000347617 ARHGEF39Q8N4T4 335 aa14.26□□□□□ -0.13
HMGA1-202ENST00000347617 LRRC75AQ8NAA5 344 aa14.26□□□□□ -0.13
HMGA1-202ENST00000347617 INTS14Q96SY0 518 aa14.26□□□□□ -0.13
HMGA1-202ENST00000347617 NRIP2Q9BQI9 281 aa14.26□□□□□ -0.13
HMGA1-202ENST00000347617 CHMP1AQ9HD42 196 aaPredicted RBP14.26□□□□□ -0.13
HMGA1-202ENST00000347617 PRMT8Q9NR22 394 aaPredicted RBP14.26□□□□□ -0.13
HMGA1-202ENST00000347617 TDRD6O60522 2096 aaKnown RBP14.26□□□□□ -0.13
HMGA1-202ENST00000347617 A0A0B4J2A0 478 aa14.25□□□□□ -0.13
HMGA1-202ENST00000347617 BLACEA4D250 179 aa14.25□□□□□ -0.13
HMGA1-202ENST00000347617 MEIS3P1A6NDR6 274 aa14.25□□□□□ -0.13
HMGA1-202ENST00000347617 NPIPB9F8W1W9 429 aa14.25□□□□□ -0.13
HMGA1-202ENST00000347617 PMELP40967 661 aa14.25□□□□□ -0.13
HMGA1-202ENST00000347617 KIR3DL2P43630 455 aa14.25□□□□□ -0.13
HMGA1-202ENST00000347617 GPR3P46089 330 aa14.25□□□□□ -0.13
HMGA1-202ENST00000347617 CAV2P51636 162 aa14.25□□□□□ -0.13
HMGA1-202ENST00000347617 DMWDQ09019 674 aa14.25□□□□□ -0.13
HMGA1-202ENST00000347617 PRTGQ2VWP7 1150 aa14.25□□□□□ -0.13
HMGA1-202ENST00000347617 PRSS35Q8N3Z0 413 aa14.25□□□□□ -0.13
HMGA1-202ENST00000347617 ZNF561Q8N587 486 aa14.25□□□□□ -0.13
HMGA1-202ENST00000347617 CCDC3Q9BQI4 270 aa14.25□□□□□ -0.13
HMGA1-202ENST00000347617 OR51M1Q9H341 326 aa14.25□□□□□ -0.13
HMGA1-202ENST00000347617 LPAR3Q9UBY5 353 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms