RNA–Protein interactions for RNA: ENST00000346436.10

CLCN6-202, Transcript of chloride voltage-gated channel 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN6, Length 5,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-202ENST00000346436 TEAD3Q99594 435 aa9.88□□□□□ -0.83
CLCN6-202ENST00000346436 C19orf43Q9BQ61 176 aa9.88□□□□□ -0.83
CLCN6-202ENST00000346436 SEC22CQ9BRL7 303 aa9.88□□□□□ -0.83
CLCN6-202ENST00000346436 OR2W5A6NFC9 320 aa9.88□□□□□ -0.83
CLCN6-202ENST00000346436 GP1BAP07359 652 aa9.88□□□□□ -0.83
CLCN6-202ENST00000346436 SERPINA2P20848 420 aa9.88□□□□□ -0.83
CLCN6-202ENST00000346436 SLC22A6Q4U2R8 563 aa9.88□□□□□ -0.83
CLCN6-202ENST00000346436 ADGRF3Q8IZF5 1079 aa9.88□□□□□ -0.83
CLCN6-202ENST00000346436 SYT5O00445 386 aa9.88□□□□□ -0.83
CLCN6-202ENST00000346436 XRCC2O43543 280 aa9.88□□□□□ -0.83
CLCN6-202ENST00000346436 SIX6O95475 246 aa9.88□□□□□ -0.83
CLCN6-202ENST00000346436 IGHV3-9P01782 118 aa9.88□□□□□ -0.83
CLCN6-202ENST00000346436 NAGAP17050 411 aa9.88□□□□□ -0.83
CLCN6-202ENST00000346436 BCKDHBP21953 392 aa9.88□□□□□ -0.83
CLCN6-202ENST00000346436 PTAFRP25105 342 aa9.88□□□□□ -0.83
CLCN6-202ENST00000346436 LPCAT3Q6P1A2 487 aa9.88□□□□□ -0.83
CLCN6-202ENST00000346436 CLEC2AQ6UVW9 174 aa9.88□□□□□ -0.83
CLCN6-202ENST00000346436 ZNF620Q6ZNG0 422 aa9.88□□□□□ -0.83
CLCN6-202ENST00000346436 OVCH1Q7RTY7 1134 aa9.88□□□□□ -0.83
CLCN6-202ENST00000346436 OR2I1PQ8NGU4 316 aa9.88□□□□□ -0.83
CLCN6-202ENST00000346436 POC1BQ8TC44 478 aa9.88□□□□□ -0.83
CLCN6-202ENST00000346436 RNF170Q96K19 258 aa9.88□□□□□ -0.83
CLCN6-202ENST00000346436 BCO1Q9HAY6 547 aa9.88□□□□□ -0.83
CLCN6-202ENST00000346436 ZFP64Q9NPA5 681 aa9.88□□□□□ -0.83
CLCN6-202ENST00000346436 ERRFI1Q9UJM3 462 aaPredicted RBP9.88□□□□□ -0.83
CLCN6-202ENST00000346436 AMDHD2Q9Y303 409 aa9.88□□□□□ -0.83
CLCN6-202ENST00000346436 TRABD2BA6NFA1 517 aa9.87□□□□□ -0.83
CLCN6-202ENST00000346436 FRG2CA6NGY1 282 aa9.87□□□□□ -0.83
CLCN6-202ENST00000346436 B4E171 279 aa9.87□□□□□ -0.83
CLCN6-202ENST00000346436 PRSS3P35030 304 aa9.87□□□□□ -0.83
CLCN6-202ENST00000346436 TSPAN7P41732 249 aa9.87□□□□□ -0.83
CLCN6-202ENST00000346436 CRYBB2P43320 205 aa9.87□□□□□ -0.83
CLCN6-202ENST00000346436 CD163Q86VB7 1156 aa9.87□□□□□ -0.83
CLCN6-202ENST00000346436 CA13Q8N1Q1 262 aa9.87□□□□□ -0.83
CLCN6-202ENST00000346436 DVL3Q92997 716 aaPredicted RBP9.87□□□□□ -0.83
CLCN6-202ENST00000346436 LINC00615Q96LM1 132 aaPredicted RBP9.87□□□□□ -0.83
CLCN6-202ENST00000346436 ACOXLQ9NUZ1 547 aa9.87□□□□□ -0.83
CLCN6-202ENST00000346436 F5P12259 2224 aa9.87□□□□□ -0.83
CLCN6-202ENST00000346436 RPS27P42677 84 aaKnown RBP9.87□□□□□ -0.83
CLCN6-202ENST00000346436 HOXA1P49639 335 aaPredicted RBP9.87□□□□□ -0.83
CLCN6-202ENST00000346436 SPOCK1Q08629 439 aa9.87□□□□□ -0.83
CLCN6-202ENST00000346436 ISXQ2M1V0 245 aa9.87□□□□□ -0.83
CLCN6-202ENST00000346436 RBMXL3Q8N7X1 1067 aaKnown RBP9.87□□□□□ -0.83
CLCN6-202ENST00000346436 TSLPQ969D9 159 aa9.87□□□□□ -0.83
CLCN6-202ENST00000346436 OXGR1Q96P68 337 aa9.87□□□□□ -0.83
CLCN6-202ENST00000346436 S1PR3Q99500 378 aa9.87□□□□□ -0.83
CLCN6-202ENST00000346436 ZMAT3Q9HA38 289 aaKnown RBP9.87□□□□□ -0.83
CLCN6-202ENST00000346436 SLC22A11Q9NSA0 550 aa9.87□□□□□ -0.83
CLCN6-202ENST00000346436 MED17Q9NVC6 651 aa9.87□□□□□ -0.83
CLCN6-202ENST00000346436 A0A1W2PS29 197 aa9.87□□□□□ -0.83
CLCN6-202ENST00000346436 SERPINF1P36955 418 aa9.87□□□□□ -0.83
CLCN6-202ENST00000346436 THBS3P49746 956 aa9.87□□□□□ -0.83
CLCN6-202ENST00000346436 LTBQ06643 244 aa9.87□□□□□ -0.83
CLCN6-202ENST00000346436 METAP1DQ6UB28 335 aaPredicted RBP9.87□□□□□ -0.83
CLCN6-202ENST00000346436 ZNF793Q6ZN11 406 aa9.87□□□□□ -0.83
CLCN6-202ENST00000346436 SDF2Q99470 211 aa9.87□□□□□ -0.83
CLCN6-202ENST00000346436 C7orf50Q9BRJ6 194 aaKnown RBP9.87□□□□□ -0.83
CLCN6-202ENST00000346436 TMEM59Q9BXS4 323 aa9.87□□□□□ -0.83
CLCN6-202ENST00000346436 APMAPQ9HDC9 416 aa9.87□□□□□ -0.83
CLCN6-202ENST00000346436 OR5V1Q9UGF6 321 aa9.87□□□□□ -0.83
CLCN6-202ENST00000346436 C19orf53Q9UNZ5 99 aaPredicted RBP9.87□□□□□ -0.83
CLCN6-202ENST00000346436 A0A0A6YYJ9 748 aa9.87□□□□□ -0.83
CLCN6-202ENST00000346436 GLRA1P23415 457 aa9.87□□□□□ -0.83
CLCN6-202ENST00000346436 STARD6P59095 220 aa9.87□□□□□ -0.83
CLCN6-202ENST00000346436 PAN3Q58A45 887 aaKnown RBP9.87□□□□□ -0.83
CLCN6-202ENST00000346436 HAGHLQ6PII5 290 aaPredicted RBP9.87□□□□□ -0.83
CLCN6-202ENST00000346436 KCNIP4Q6PIL6 250 aa9.87□□□□□ -0.83
CLCN6-202ENST00000346436 WDR74Q6RFH5 385 aaPredicted RBP9.87□□□□□ -0.83
CLCN6-202ENST00000346436 LSRQ86X29 649 aaPredicted RBP9.87□□□□□ -0.83
CLCN6-202ENST00000346436 OR6V1Q8N148 313 aa9.87□□□□□ -0.83
CLCN6-202ENST00000346436 OR2A1Q8NGT9 310 aa9.87□□□□□ -0.83
CLCN6-202ENST00000346436 OR52N1Q8NH53 320 aa9.87□□□□□ -0.83
CLCN6-202ENST00000346436 ALG12Q9BV10 488 aa9.87□□□□□ -0.83
CLCN6-202ENST00000346436 F5H5P2 479 aa9.86□□□□□ -0.83
CLCN6-202ENST00000346436 FFAR1O14842 300 aa9.86□□□□□ -0.83
CLCN6-202ENST00000346436 KITLGP21583 273 aa9.86□□□□□ -0.83
CLCN6-202ENST00000346436 TBXA2RP21731 343 aa9.86□□□□□ -0.83
CLCN6-202ENST00000346436 RFC3P40938 356 aa9.86□□□□□ -0.83
CLCN6-202ENST00000346436 SPNS3Q6ZMD2 512 aa9.86□□□□□ -0.83
CLCN6-202ENST00000346436 OR4D11Q8NGI4 311 aa9.86□□□□□ -0.83
CLCN6-202ENST00000346436 FLVCR2Q9UPI3 526 aa9.86□□□□□ -0.83
CLCN6-202ENST00000346436 ASCC3Q8N3C0 2202 aaKnown RBP9.86□□□□□ -0.83
CLCN6-202ENST00000346436 DEGS1O15121 323 aa9.86□□□□□ -0.83
CLCN6-202ENST00000346436 MYF5P13349 255 aa9.86□□□□□ -0.83
CLCN6-202ENST00000346436 CD34P28906 385 aa9.86□□□□□ -0.83
CLCN6-202ENST00000346436 CD79BP40259 229 aa9.86□□□□□ -0.83
CLCN6-202ENST00000346436 RAB11AP62491 216 aa9.86□□□□□ -0.83
CLCN6-202ENST00000346436 TPBGQ13641 420 aa9.86□□□□□ -0.83
CLCN6-202ENST00000346436 ZNF441Q8N8Z8 693 aa9.86□□□□□ -0.83
CLCN6-202ENST00000346436 OR56B1Q8NGI3 324 aa9.86□□□□□ -0.83
CLCN6-202ENST00000346436 OR2Y1Q8NGV0 311 aa9.86□□□□□ -0.83
CLCN6-202ENST00000346436 OR2M2Q96R28 347 aa9.86□□□□□ -0.83
CLCN6-202ENST00000346436 LIN7BQ9HAP6 207 aa9.86□□□□□ -0.83
CLCN6-202ENST00000346436 TCFL5Q9UL49 500 aa9.86□□□□□ -0.83
CLCN6-202ENST00000346436 ZNF281Q9Y2X9 895 aa9.86□□□□□ -0.83
CLCN6-202ENST00000346436 SH2D1BO14796 132 aa9.86□□□□□ -0.83
CLCN6-202ENST00000346436 FGF17O60258 216 aa9.86□□□□□ -0.83
CLCN6-202ENST00000346436 AKR7A3O95154 331 aa9.86□□□□□ -0.83
CLCN6-202ENST00000346436 RAB3DO95716 219 aa9.86□□□□□ -0.83
CLCN6-202ENST00000346436 UBCP0CG48 685 aaKnown RBP9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms