RNA–Protein interactions for RNA: ENST00000345795.6

CASC4-202, Transcript of cancer susceptibility 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CASC4, Length 3,764 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-202ENST00000345795 PGLYRP3Q96LB9 341 aa11.92□□□□□ -0.5
CASC4-202ENST00000345795 HES7Q9BYE0 225 aa11.92□□□□□ -0.5
CASC4-202ENST00000345795 TXNIPQ9H3M7 391 aa11.92□□□□□ -0.5
CASC4-202ENST00000345795 C1orf198Q9H425 327 aa11.92□□□□□ -0.5
CASC4-202ENST00000345795 TLN1Q9Y490 2541 aaKnown RBP11.92□□□□□ -0.5
CASC4-202ENST00000345795 LINC00303Q3SY05 128 aa11.92□□□□□ -0.5
CASC4-202ENST00000345795 ZNF468Q5VIY5 522 aaPredicted RBP11.92□□□□□ -0.5
CASC4-202ENST00000345795 NHLRC1Q6VVB1 395 aa11.92□□□□□ -0.5
CASC4-202ENST00000345795 OTOSQ8NHW6 89 aa11.92□□□□□ -0.5
CASC4-202ENST00000345795 PIGCQ92535 297 aa11.92□□□□□ -0.5
CASC4-202ENST00000345795 ADIPOR1Q96A54 375 aa11.92□□□□□ -0.5
CASC4-202ENST00000345795 C20orf85Q9H1P6 137 aa11.92□□□□□ -0.5
CASC4-202ENST00000345795 GPN1Q9HCN4 374 aaPredicted RBP11.92□□□□□ -0.5
CASC4-202ENST00000345795 CHST11Q9NPF2 352 aa11.92□□□□□ -0.5
CASC4-202ENST00000345795 HIF3AQ9Y2N7 669 aa11.92□□□□□ -0.5
CASC4-202ENST00000345795 NOX1Q9Y5S8 564 aa11.92□□□□□ -0.5
CASC4-202ENST00000345795 OR5H15A6NDH6 313 aa11.92□□□□□ -0.5
CASC4-202ENST00000345795 KLF4O43474 513 aa11.92□□□□□ -0.5
CASC4-202ENST00000345795 HPXP02790 462 aa11.92□□□□□ -0.5
CASC4-202ENST00000345795 ALOX5APP20292 161 aa11.92□□□□□ -0.5
CASC4-202ENST00000345795 HSF2Q03933 536 aa11.92□□□□□ -0.5
CASC4-202ENST00000345795 C3P1Q6ZMU1 363 aa11.92□□□□□ -0.5
CASC4-202ENST00000345795 CMIPQ8IY22 773 aa11.92□□□□□ -0.5
CASC4-202ENST00000345795 ZNF679Q8IYX0 411 aa11.92□□□□□ -0.5
CASC4-202ENST00000345795 ZNF687Q8N1G0 1237 aa11.92□□□□□ -0.5
CASC4-202ENST00000345795 OR51T1Q8NGJ9 327 aa11.92□□□□□ -0.5
CASC4-202ENST00000345795 DCBLD2Q96PD2 775 aa11.92□□□□□ -0.5
CASC4-202ENST00000345795 INPP5EQ9NRR6 644 aa11.92□□□□□ -0.5
CASC4-202ENST00000345795 ZNF230Q9UIE0 474 aaPredicted RBP11.92□□□□□ -0.5
CASC4-202ENST00000345795 ZNF208O43345 1280 aa11.91□□□□□ -0.5
CASC4-202ENST00000345795 CREBL2O60519 120 aaPredicted RBP11.91□□□□□ -0.5
CASC4-202ENST00000345795 RBMS1P29558 406 aaKnown RBP11.91□□□□□ -0.5
CASC4-202ENST00000345795 DUSP3P51452 185 aaPredicted RBP11.91□□□□□ -0.5
CASC4-202ENST00000345795 CCL11P51671 97 aa11.91□□□□□ -0.5
CASC4-202ENST00000345795 CLDN20P56880 219 aa11.91□□□□□ -0.5
CASC4-202ENST00000345795 TRAM1Q15629 374 aa11.91□□□□□ -0.5
CASC4-202ENST00000345795 OVCH1Q7RTY7 1134 aa11.91□□□□□ -0.5
CASC4-202ENST00000345795 METTL8Q9H825 291 aaKnown RBP11.91□□□□□ -0.5
CASC4-202ENST00000345795 CYSLTR2Q9NS75 346 aa11.91□□□□□ -0.5
CASC4-202ENST00000345795 SLC22A5O76082 557 aa11.91□□□□□ -0.5
CASC4-202ENST00000345795 RGS11O94810 467 aa11.91□□□□□ -0.5
CASC4-202ENST00000345795 NXPH3O95157 252 aa11.91□□□□□ -0.5
CASC4-202ENST00000345795 CER1O95813 267 aa11.91□□□□□ -0.5
CASC4-202ENST00000345795 DLSTP36957 453 aa11.91□□□□□ -0.5
CASC4-202ENST00000345795 GAS1P54826 345 aa11.91□□□□□ -0.5
CASC4-202ENST00000345795 RASGEF1BQ0VAM2 473 aa11.91□□□□□ -0.5
CASC4-202ENST00000345795 PMPCAQ10713 525 aa11.91□□□□□ -0.5
CASC4-202ENST00000345795 ASAH1Q13510 395 aa11.91□□□□□ -0.5
CASC4-202ENST00000345795 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.91□□□□□ -0.5
CASC4-202ENST00000345795 YIF1BQ5BJH7 314 aa11.91□□□□□ -0.5
CASC4-202ENST00000345795 C3orf33Q6P1S2 294 aa11.91□□□□□ -0.5
CASC4-202ENST00000345795 ZNF385AQ96PM9 386 aaKnown RBP11.91□□□□□ -0.5
CASC4-202ENST00000345795 TINAGL1Q9GZM7 467 aaPredicted RBP11.91□□□□□ -0.5
CASC4-202ENST00000345795 UPB1Q9UBR1 384 aa11.91□□□□□ -0.5
CASC4-202ENST00000345795 ST6GALNAC2Q9UJ37 374 aa11.91□□□□□ -0.5
CASC4-202ENST00000345795 WIF1Q9Y5W5 379 aa11.91□□□□□ -0.5
CASC4-202ENST00000345795 PLXNA2O75051 1894 aa11.91□□□□□ -0.5
CASC4-202ENST00000345795 PRR19A6NJB7 356 aa11.91□□□□□ -0.5
CASC4-202ENST00000345795 ARGFXA6NJG6 315 aa11.91□□□□□ -0.5
CASC4-202ENST00000345795 ZSCAN5BA6NJL1 495 aa11.91□□□□□ -0.5
CASC4-202ENST00000345795 ZNF736B4DX44 427 aaPredicted RBP11.91□□□□□ -0.5
CASC4-202ENST00000345795 STMND1H3BQB6 276 aa11.91□□□□□ -0.5
CASC4-202ENST00000345795 PLPP3O14495 311 aa11.91□□□□□ -0.5
CASC4-202ENST00000345795 FCGR2AP12318 317 aa11.91□□□□□ -0.5
CASC4-202ENST00000345795 PSMB1P20618 241 aaKnown RBP11.91□□□□□ -0.5
CASC4-202ENST00000345795 GALNSP34059 522 aa11.91□□□□□ -0.5
CASC4-202ENST00000345795 OPRM1P35372 400 aa11.91□□□□□ -0.5
CASC4-202ENST00000345795 CEBPGP53567 150 aa11.91□□□□□ -0.5
CASC4-202ENST00000345795 GABREP78334 506 aa11.91□□□□□ -0.5
CASC4-202ENST00000345795 TNK1Q13470 666 aa11.91□□□□□ -0.5
CASC4-202ENST00000345795 HDDC2Q7Z4H3 204 aa11.91□□□□□ -0.5
CASC4-202ENST00000345795 GCNT2Q8N0V5 402 aa11.91□□□□□ -0.5
CASC4-202ENST00000345795 BPIFB2Q8N4F0 458 aa11.91□□□□□ -0.5
CASC4-202ENST00000345795 RNASE11Q8TAA1 199 aaKnown RBP11.91□□□□□ -0.5
CASC4-202ENST00000345795 MVB12AQ96EY5 273 aa11.91□□□□□ -0.5
CASC4-202ENST00000345795 MSANTD3Q96H12 275 aa11.91□□□□□ -0.5
CASC4-202ENST00000345795 GPR173Q9NS66 373 aa11.91□□□□□ -0.5
CASC4-202ENST00000345795 LRFN1Q9P244 771 aa11.91□□□□□ -0.5
CASC4-202ENST00000345795 MED13Q9UHV7 2174 aa11.91□□□□□ -0.5
CASC4-202ENST00000345795 OTOGLQ3ZCN5 2332 aa11.9□□□□□ -0.5
CASC4-202ENST00000345795 A0A1B0GTQ1 180 aa11.9□□□□□ -0.5
CASC4-202ENST00000345795 TMEM212A6NML5 194 aa11.9□□□□□ -0.5
CASC4-202ENST00000345795 M0R233 179 aa11.9□□□□□ -0.5
CASC4-202ENST00000345795 HTR5AP47898 357 aa11.9□□□□□ -0.5
CASC4-202ENST00000345795 SELENOPP49908 381 aa11.9□□□□□ -0.5
CASC4-202ENST00000345795 NPY4RP50391 375 aa11.9□□□□□ -0.5
CASC4-202ENST00000345795 SORDQ00796 357 aa11.9□□□□□ -0.5
CASC4-202ENST00000345795 UBE2NLQ5JXB2 153 aa11.9□□□□□ -0.5
CASC4-202ENST00000345795 SPATA46Q5T0L3 261 aa11.9□□□□□ -0.5
CASC4-202ENST00000345795 TPRA1Q86W33 373 aa11.9□□□□□ -0.5
CASC4-202ENST00000345795 TMEM105Q8N8V8 129 aa11.9□□□□□ -0.5
CASC4-202ENST00000345795 CNEP1R1Q8N9A8 125 aa11.9□□□□□ -0.5
CASC4-202ENST00000345795 OR52N4Q8NGI2 321 aa11.9□□□□□ -0.5
CASC4-202ENST00000345795 STRADBQ9C0K7 418 aa11.9□□□□□ -0.5
CASC4-202ENST00000345795 A3GALT2U3KPV4 340 aa11.9□□□□□ -0.5
CASC4-202ENST00000345795 FREM1Q5H8C1 2179 aa11.9□□□□□ -0.5
CASC4-202ENST00000345795 AIPO00170 330 aa11.9□□□□□ -0.5
CASC4-202ENST00000345795 GPRIN2O60269 458 aa11.9□□□□□ -0.5
CASC4-202ENST00000345795 EIF4E2O60573 245 aaKnown RBP11.9□□□□□ -0.5
CASC4-202ENST00000345795 SCO1O75880 301 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms