RNA–Protein interactions for RNA: ENST00000345356.10

COL12A1-202, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL12A1, Length 5,886 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-202ENST00000345356 EDAQ92838 391 aa11.06□□□□□ -0.64
COL12A1-202ENST00000345356 EMG1Q92979 244 aaKnown RBP11.06□□□□□ -0.64
COL12A1-202ENST00000345356 ZDHHC11Q9H8X9 412 aa11.06□□□□□ -0.64
COL12A1-202ENST00000345356 ARL2-SNX15V9GYD0 113 aa11.06□□□□□ -0.64
COL12A1-202ENST00000345356 XKRY2A2RUG3 117 aa11.06□□□□□ -0.64
COL12A1-202ENST00000345356 CDC14CA4D256 554 aa11.06□□□□□ -0.64
COL12A1-202ENST00000345356 GLTPD2A6NH11 291 aa11.06□□□□□ -0.64
COL12A1-202ENST00000345356 F6UZH7 168 aa11.06□□□□□ -0.64
COL12A1-202ENST00000345356 TRAPPC2LH3BP13 241 aa11.06□□□□□ -0.64
COL12A1-202ENST00000345356 SSSCA1O60232 199 aa11.06□□□□□ -0.64
COL12A1-202ENST00000345356 CST4P01036 141 aa11.06□□□□□ -0.64
COL12A1-202ENST00000345356 SLC35A1P78382 337 aa11.06□□□□□ -0.64
COL12A1-202ENST00000345356 ZNF765Q7L2R6 523 aa11.06□□□□□ -0.64
COL12A1-202ENST00000345356 LHX4Q969G2 390 aa11.06□□□□□ -0.64
COL12A1-202ENST00000345356 NKX3-1Q99801 234 aaPredicted RBP11.06□□□□□ -0.64
COL12A1-202ENST00000345356 CLDND1Q9NY35 253 aa11.06□□□□□ -0.64
COL12A1-202ENST00000345356 FLVCR1Q9Y5Y0 555 aa11.06□□□□□ -0.64
COL12A1-202ENST00000345356 HNRNPA2B1P22626 353 aaKnown RBP11.05□□□□□ -0.64
COL12A1-202ENST00000345356 ZNF133P52736 654 aaPredicted RBP11.05□□□□□ -0.64
COL12A1-202ENST00000345356 AWAT1Q58HT5 328 aa11.05□□□□□ -0.64
COL12A1-202ENST00000345356 DND1Q8IYX4 353 aaKnown RBP11.05□□□□□ -0.64
COL12A1-202ENST00000345356 OR5M9Q8NGP3 310 aa11.05□□□□□ -0.64
COL12A1-202ENST00000345356 CMTM3Q96MX0 182 aa11.05□□□□□ -0.64
COL12A1-202ENST00000345356 SLC35B3Q9H1N7 401 aa11.05□□□□□ -0.64
COL12A1-202ENST00000345356 GHRLQ9UBU3 117 aa11.05□□□□□ -0.64
COL12A1-202ENST00000345356 GPR160Q9UJ42 338 aa11.05□□□□□ -0.64
COL12A1-202ENST00000345356 RPH3ALQ9UNE2 315 aa11.05□□□□□ -0.64
COL12A1-202ENST00000345356 PEX12O00623 359 aa11.05□□□□□ -0.64
COL12A1-202ENST00000345356 LIMS3P0CW19 117 aa11.05□□□□□ -0.64
COL12A1-202ENST00000345356 LIMS4P0CW20 117 aa11.05□□□□□ -0.64
COL12A1-202ENST00000345356 RBP2P50120 134 aa11.05□□□□□ -0.64
COL12A1-202ENST00000345356 C5orf46Q6UWT4 87 aa11.05□□□□□ -0.64
COL12A1-202ENST00000345356 ADIPOR2Q86V24 386 aa11.05□□□□□ -0.64
COL12A1-202ENST00000345356 ZNF687Q8N1G0 1237 aa11.05□□□□□ -0.64
COL12A1-202ENST00000345356 EXD3Q8N9H8 876 aa11.05□□□□□ -0.64
COL12A1-202ENST00000345356 PIGTQ969N2 578 aa11.05□□□□□ -0.64
COL12A1-202ENST00000345356 C5P01031 1676 aa11.05□□□□□ -0.64
COL12A1-202ENST00000345356 LOC105371267A0A1B0GV96 52 aa11.05□□□□□ -0.64
COL12A1-202ENST00000345356 HSD17B6O14756 317 aa11.05□□□□□ -0.64
COL12A1-202ENST00000345356 GLSO94925 669 aaPredicted RBP11.05□□□□□ -0.64
COL12A1-202ENST00000345356 TBPP20226 339 aa11.05□□□□□ -0.64
COL12A1-202ENST00000345356 MPGP29372 298 aa11.05□□□□□ -0.64
COL12A1-202ENST00000345356 HHEXQ03014 270 aa11.05□□□□□ -0.64
COL12A1-202ENST00000345356 DHRS2Q13268 280 aa11.05□□□□□ -0.64
COL12A1-202ENST00000345356 DUSP5Q16690 384 aa11.05□□□□□ -0.64
COL12A1-202ENST00000345356 TMEM64Q6YI46 380 aa11.05□□□□□ -0.64
COL12A1-202ENST00000345356 OR4S1Q8NGB4 309 aa11.05□□□□□ -0.64
COL12A1-202ENST00000345356 C22orf15Q8WYQ4 148 aa11.05□□□□□ -0.64
COL12A1-202ENST00000345356 MSI2Q96DH6 328 aaKnown RBP11.05□□□□□ -0.64
COL12A1-202ENST00000345356 FAM210BQ96KR6 192 aa11.05□□□□□ -0.64
COL12A1-202ENST00000345356 SEC11CQ9BY50 192 aa11.05□□□□□ -0.64
COL12A1-202ENST00000345356 CA14Q9ULX7 337 aa11.05□□□□□ -0.64
COL12A1-202ENST00000345356 TRAV36DV7A0A075B6V5 113 aa11.05□□□□□ -0.64
COL12A1-202ENST00000345356 PMS2P11Q13670 270 aa11.05□□□□□ -0.64
COL12A1-202ENST00000345356 THNSL2Q86YJ6 484 aa11.05□□□□□ -0.64
COL12A1-202ENST00000345356 SLC35D1Q9NTN3 355 aa11.05□□□□□ -0.64
COL12A1-202ENST00000345356 RGPD1P0DJD0 1748 aa11.05□□□□□ -0.64
COL12A1-202ENST00000345356 IGLV3-10A0A075B6K4 115 aa11.04□□□□□ -0.64
COL12A1-202ENST00000345356 FAM221BA6H8Z2 402 aa11.04□□□□□ -0.64
COL12A1-202ENST00000345356 DAOP14920 347 aa11.04□□□□□ -0.64
COL12A1-202ENST00000345356 PVRP15151 417 aa11.04□□□□□ -0.64
COL12A1-202ENST00000345356 GALP22466 123 aa11.04□□□□□ -0.64
COL12A1-202ENST00000345356 ACKR1Q16570 336 aa11.04□□□□□ -0.64
COL12A1-202ENST00000345356 ZNF100Q8IYN0 542 aa11.04□□□□□ -0.64
COL12A1-202ENST00000345356 TECTBQ96PL2 329 aa11.04□□□□□ -0.64
COL12A1-202ENST00000345356 ELOA3CA0A087WX78 387 aaPredicted RBP11.04□□□□□ -0.64
COL12A1-202ENST00000345356 TUSC2O75896 110 aa11.04□□□□□ -0.64
COL12A1-202ENST00000345356 HPXP02790 462 aa11.04□□□□□ -0.64
COL12A1-202ENST00000345356 NOVA1P51513 510 aaKnown RBP11.04□□□□□ -0.64
COL12A1-202ENST00000345356 PKIAP61925 76 aa11.04□□□□□ -0.64
COL12A1-202ENST00000345356 ERV3-1Q14264 604 aa11.04□□□□□ -0.64
COL12A1-202ENST00000345356 FAM109BQ6ICB4 259 aaPredicted RBP11.04□□□□□ -0.64
COL12A1-202ENST00000345356 MRM1Q6IN84 353 aaKnown RBP11.04□□□□□ -0.64
COL12A1-202ENST00000345356 OVCH2Q7RTZ1 564 aa11.04□□□□□ -0.64
COL12A1-202ENST00000345356 ABI3BPQ7Z7G0 1075 aa11.04□□□□□ -0.64
COL12A1-202ENST00000345356 LRRC18Q8N456 261 aa11.04□□□□□ -0.64
COL12A1-202ENST00000345356 TSTD1Q8NFU3 115 aa11.04□□□□□ -0.64
COL12A1-202ENST00000345356 INSM2Q96T92 566 aaPredicted RBP11.04□□□□□ -0.64
COL12A1-202ENST00000345356 CUTCQ9NTM9 273 aa11.04□□□□□ -0.64
COL12A1-202ENST00000345356 ADAMTS5Q9UNA0 930 aa11.04□□□□□ -0.64
COL12A1-202ENST00000345356 A0A0J9YY10 115 aa11.04□□□□□ -0.64
COL12A1-202ENST00000345356 MBLAC1A4D2B0 266 aaPredicted RBP11.04□□□□□ -0.64
COL12A1-202ENST00000345356 ETHE1O95571 254 aa11.04□□□□□ -0.64
COL12A1-202ENST00000345356 ANKRD16Q6P6B7 361 aa11.04□□□□□ -0.64
COL12A1-202ENST00000345356 GCNT2Q8N0V5 402 aa11.04□□□□□ -0.64
COL12A1-202ENST00000345356 CPT1CQ8TCG5 803 aa11.04□□□□□ -0.64
COL12A1-202ENST00000345356 CLSTN3Q9BQT9 956 aa11.04□□□□□ -0.64
COL12A1-202ENST00000345356 SUSD2Q9UGT4 822 aa11.04□□□□□ -0.64
COL12A1-202ENST00000345356 SLC45A1Q9Y2W3 748 aa11.04□□□□□ -0.64
COL12A1-202ENST00000345356 ENTPD2Q9Y5L3 495 aa11.04□□□□□ -0.64
COL12A1-202ENST00000345356 TMEM127O75204 238 aa11.04□□□□□ -0.64
COL12A1-202ENST00000345356 ACTL6BO94805 426 aa11.04□□□□□ -0.64
COL12A1-202ENST00000345356 NID1P14543 1247 aa11.04□□□□□ -0.64
COL12A1-202ENST00000345356 PTGFRP43088 359 aa11.04□□□□□ -0.64
COL12A1-202ENST00000345356 GSK3AP49840 483 aa11.04□□□□□ -0.64
COL12A1-202ENST00000345356 TMEM128Q5BJH2 165 aa11.04□□□□□ -0.64
COL12A1-202ENST00000345356 CLLU1OSQ5K130 101 aa11.04□□□□□ -0.64
COL12A1-202ENST00000345356 PPP1R3BQ86XI6 285 aa11.04□□□□□ -0.64
COL12A1-202ENST00000345356 NUBPLQ8TB37 319 aa11.04□□□□□ -0.64
COL12A1-202ENST00000345356 PACRGQ96M98 296 aaPredicted RBP11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms