RNA–Protein interactions for RNA: ENST00000344391.9

CEACAM1-202, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

TSL 1 (best)

Gene CEACAM1, Length 1,619 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-202ENST00000344391 CD53P19397 219 aa14.33□□□□□ -0.12
CEACAM1-202ENST00000344391 CRYBB2P43320 205 aa14.33□□□□□ -0.12
CEACAM1-202ENST00000344391 NANOS3P60323 173 aaKnown RBP14.33□□□□□ -0.12
CEACAM1-202ENST00000344391 RPS25P62851 125 aaKnown RBP14.33□□□□□ -0.12
CEACAM1-202ENST00000344391 TIMM50Q3ZCQ8 353 aa14.33□□□□□ -0.12
CEACAM1-202ENST00000344391 FDX2Q6P4F2 183 aa14.33□□□□□ -0.12
CEACAM1-202ENST00000344391 ARL9Q6T311 187 aa14.33□□□□□ -0.12
CEACAM1-202ENST00000344391 BTLAQ7Z6A9 289 aa14.33□□□□□ -0.12
CEACAM1-202ENST00000344391 SYT9Q86SS6 491 aa14.33□□□□□ -0.12
CEACAM1-202ENST00000344391 HSD17B8Q92506 261 aa14.33□□□□□ -0.12
CEACAM1-202ENST00000344391 SMIM19Q96E16 107 aa14.33□□□□□ -0.12
CEACAM1-202ENST00000344391 PGLYRP3Q96LB9 341 aa14.33□□□□□ -0.12
CEACAM1-202ENST00000344391 WACQ9BTA9 647 aa14.33□□□□□ -0.12
CEACAM1-202ENST00000344391 STUB1Q9UNE7 303 aa14.33□□□□□ -0.12
CEACAM1-202ENST00000344391 ZNF878C9JN71 531 aa14.32□□□□□ -0.12
CEACAM1-202ENST00000344391 GPX5O75715 221 aa14.32□□□□□ -0.12
CEACAM1-202ENST00000344391 IL18BPO95998 194 aa14.32□□□□□ -0.12
CEACAM1-202ENST00000344391 CGAP01215 116 aa14.32□□□□□ -0.12
CEACAM1-202ENST00000344391 DCTDP32321 178 aa14.32□□□□□ -0.12
CEACAM1-202ENST00000344391 SH3BGRP55822 239 aaPredicted RBP14.32□□□□□ -0.12
CEACAM1-202ENST00000344391 LSM3P62310 102 aaKnown RBP14.32□□□□□ -0.12
CEACAM1-202ENST00000344391 SLC3A1Q07837 685 aa14.32□□□□□ -0.12
CEACAM1-202ENST00000344391 CNPY1Q3B7I2 92 aa14.32□□□□□ -0.12
CEACAM1-202ENST00000344391 CCDC92Q53HC0 331 aaPredicted RBP14.32□□□□□ -0.12
CEACAM1-202ENST00000344391 GDPGP1Q6ZNW5 385 aa14.32□□□□□ -0.12
CEACAM1-202ENST00000344391 Q6ZT83 130 aa14.32□□□□□ -0.12
CEACAM1-202ENST00000344391 SLC16A14Q7RTX9 510 aa14.32□□□□□ -0.12
CEACAM1-202ENST00000344391 HIST2H2ABQ8IUE6 130 aaPredicted RBP14.32□□□□□ -0.12
CEACAM1-202ENST00000344391 TMEM203Q969S6 136 aa14.32□□□□□ -0.12
CEACAM1-202ENST00000344391 CHCHD6Q9BRQ6 235 aa14.32□□□□□ -0.12
CEACAM1-202ENST00000344391 TINAGQ9UJW2 476 aa14.32□□□□□ -0.12
CEACAM1-202ENST00000344391 FBXL3Q9UKT7 428 aa14.32□□□□□ -0.12
CEACAM1-202ENST00000344391 TRBV2A0A0J9YWF9 115 aa14.31□□□□□ -0.12
CEACAM1-202ENST00000344391 TRIM64BA6NI03 449 aa14.31□□□□□ -0.12
CEACAM1-202ENST00000344391 SRSF10O75494 262 aaKnown RBP14.31□□□□□ -0.12
CEACAM1-202ENST00000344391 ATE1O95260 518 aa14.31□□□□□ -0.12
CEACAM1-202ENST00000344391 GDI2P50395 445 aaKnown RBP14.31□□□□□ -0.12
CEACAM1-202ENST00000344391 PCBD1P61457 104 aa14.31□□□□□ -0.12
CEACAM1-202ENST00000344391 ALKBH1Q13686 389 aaKnown RBP14.31□□□□□ -0.12
CEACAM1-202ENST00000344391 CD200R1LQ6Q8B3 271 aa14.31□□□□□ -0.12
CEACAM1-202ENST00000344391 ST6GALNAC3Q8NDV1 305 aa14.31□□□□□ -0.12
CEACAM1-202ENST00000344391 OR1K1Q8NGR3 316 aa14.31□□□□□ -0.12
CEACAM1-202ENST00000344391 OR2G2Q8NGZ5 317 aa14.31□□□□□ -0.12
CEACAM1-202ENST00000344391 FGFBP3Q8TAT2 258 aa14.31□□□□□ -0.12
CEACAM1-202ENST00000344391 GHSRQ92847 366 aa14.31□□□□□ -0.12
CEACAM1-202ENST00000344391 TMED9Q9BVK6 235 aa14.31□□□□□ -0.12
CEACAM1-202ENST00000344391 DDX28Q9NUL7 540 aaKnown RBP14.31□□□□□ -0.12
CEACAM1-202ENST00000344391 ZNF224Q9NZL3 707 aa14.31□□□□□ -0.12
CEACAM1-202ENST00000344391 FRRS1LQ9P0K9 344 aa14.31□□□□□ -0.12
CEACAM1-202ENST00000344391 PROCRQ9UNN8 238 aa14.31□□□□□ -0.12
CEACAM1-202ENST00000344391 POLEQ07864 2286 aa14.31□□□□□ -0.12
CEACAM1-202ENST00000344391 A0A096LPE4 126 aa14.3□□□□□ -0.12
CEACAM1-202ENST00000344391 LOC100506127A0A0U1RQW1 187 aa14.3□□□□□ -0.12
CEACAM1-202ENST00000344391 A0A1W2PPZ6 126 aa14.3□□□□□ -0.12
CEACAM1-202ENST00000344391 PNPP00491 289 aa14.3□□□□□ -0.12
CEACAM1-202ENST00000344391 HLA-DPB1P04440 258 aa14.3□□□□□ -0.12
CEACAM1-202ENST00000344391 MMP7P09237 267 aaPredicted RBP14.3□□□□□ -0.12
CEACAM1-202ENST00000344391 PATE4P0C8F1 98 aa14.3□□□□□ -0.12
CEACAM1-202ENST00000344391 ZNF32P17041 273 aa14.3□□□□□ -0.12
CEACAM1-202ENST00000344391 IGHV1-2P23083 117 aa14.3□□□□□ -0.12
CEACAM1-202ENST00000344391 VBP1P61758 197 aa14.3□□□□□ -0.12
CEACAM1-202ENST00000344391 SCRN3Q0VDG4 424 aa14.3□□□□□ -0.12
CEACAM1-202ENST00000344391 SOWAHCQ53LP3 525 aaPredicted RBP14.3□□□□□ -0.12
CEACAM1-202ENST00000344391 ELFN2Q5R3F8 820 aa14.3□□□□□ -0.12
CEACAM1-202ENST00000344391 PRSS35Q8N3Z0 413 aa14.3□□□□□ -0.12
CEACAM1-202ENST00000344391 TRMT61AQ96FX7 289 aaKnown RBP14.3□□□□□ -0.12
CEACAM1-202ENST00000344391 CNTNAP3BQ96NU0 1288 aa14.3□□□□□ -0.12
CEACAM1-202ENST00000344391 CENPOQ9BU64 300 aa14.3□□□□□ -0.12
CEACAM1-202ENST00000344391 CNTNAP3Q9BZ76 1288 aa14.3□□□□□ -0.12
CEACAM1-202ENST00000344391 KCNN2Q9H2S1 579 aa14.3□□□□□ -0.12
CEACAM1-202ENST00000344391 NIPAL2Q9H841 368 aa14.3□□□□□ -0.12
CEACAM1-202ENST00000344391 SLC5A6Q9Y289 635 aa14.3□□□□□ -0.12
CEACAM1-202ENST00000344391 TIMM10BQ9Y5J6 103 aa14.3□□□□□ -0.12
CEACAM1-202ENST00000344391 R4GMQ9 66 aa14.3□□□□□ -0.12
CEACAM1-202ENST00000344391 IGSF10Q6WRI0 2623 aa14.3□□□□□ -0.12
CEACAM1-202ENST00000344391 RTTNQ86VV8 2226 aa14.3□□□□□ -0.12
CEACAM1-202ENST00000344391 TRDV1A0A1B0GX56 115 aa14.3□□□□□ -0.12
CEACAM1-202ENST00000344391 SLC22A1O15245 554 aa14.3□□□□□ -0.12
CEACAM1-202ENST00000344391 GPRIN2O60269 458 aa14.3□□□□□ -0.12
CEACAM1-202ENST00000344391 CD8BP10966 210 aa14.3□□□□□ -0.12
CEACAM1-202ENST00000344391 CTSSP25774 331 aa14.3□□□□□ -0.12
CEACAM1-202ENST00000344391 CCR9P51686 369 aa14.3□□□□□ -0.12
CEACAM1-202ENST00000344391 NCS1P62166 190 aa14.3□□□□□ -0.12
CEACAM1-202ENST00000344391 FABP5Q01469 135 aa14.3□□□□□ -0.12
CEACAM1-202ENST00000344391 MFGE8Q08431 387 aaPredicted RBP14.3□□□□□ -0.12
CEACAM1-202ENST00000344391 PMPCAQ10713 525 aa14.3□□□□□ -0.12
CEACAM1-202ENST00000344391 RAB35Q15286 201 aa14.3□□□□□ -0.12
CEACAM1-202ENST00000344391 TAF13Q15543 124 aa14.3□□□□□ -0.12
CEACAM1-202ENST00000344391 TRAM1Q15629 374 aa14.3□□□□□ -0.12
CEACAM1-202ENST00000344391 ANKRD16Q6P6B7 361 aa14.3□□□□□ -0.12
CEACAM1-202ENST00000344391 MS4A15Q8N5U1 240 aa14.3□□□□□ -0.12
CEACAM1-202ENST00000344391 ZNF610Q8N9Z0 462 aa14.3□□□□□ -0.12
CEACAM1-202ENST00000344391 BCL2L2Q92843 193 aaPredicted RBP14.3□□□□□ -0.12
CEACAM1-202ENST00000344391 C4orf45Q96LM5 186 aa14.3□□□□□ -0.12
CEACAM1-202ENST00000344391 PDCD1LG2Q9BQ51 273 aa14.3□□□□□ -0.12
CEACAM1-202ENST00000344391 SFXN3Q9BWM7 321 aa14.3□□□□□ -0.12
CEACAM1-202ENST00000344391 EXOSC4Q9NPD3 245 aaKnown RBP14.3□□□□□ -0.12
CEACAM1-202ENST00000344391 PLEK2Q9NYT0 353 aa14.3□□□□□ -0.12
CEACAM1-202ENST00000344391 SSR3Q9UNL2 185 aa14.3□□□□□ -0.12
CEACAM1-202ENST00000344391 OR4C45A6NMZ5 311 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms