RNA–Protein interactions for RNA: ENST00000343575.10

CXCL12-201, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CXCL12, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-201ENST00000343575 AQP7O14520 342 aa13.02□□□□□ -0.33
CXCL12-201ENST00000343575 SELENOFO60613 162 aa13.02□□□□□ -0.33
CXCL12-201ENST00000343575 SLC16A7O60669 478 aa13.02□□□□□ -0.33
CXCL12-201ENST00000343575 SLC22A5O76082 557 aa13.02□□□□□ -0.33
CXCL12-201ENST00000343575 HCCSP53701 268 aa13.02□□□□□ -0.33
CXCL12-201ENST00000343575 OTPQ5XKR4 325 aa13.02□□□□□ -0.33
CXCL12-201ENST00000343575 ZNF324BQ6AW86 544 aaPredicted RBP13.02□□□□□ -0.33
CXCL12-201ENST00000343575 PAMR1Q6UXH9 720 aa13.02□□□□□ -0.33
CXCL12-201ENST00000343575 ADGRE4PQ86SQ3 457 aa13.02□□□□□ -0.33
CXCL12-201ENST00000343575 CDH24Q86UP0 819 aa13.02□□□□□ -0.33
CXCL12-201ENST00000343575 TMEM123Q8N131 208 aa13.02□□□□□ -0.33
CXCL12-201ENST00000343575 KDF1Q8NAX2 398 aaPredicted RBP13.02□□□□□ -0.33
CXCL12-201ENST00000343575 ZNF485Q8NCK3 441 aa13.02□□□□□ -0.33
CXCL12-201ENST00000343575 OR4M1Q8NGD0 313 aa13.02□□□□□ -0.33
CXCL12-201ENST00000343575 OR2T4Q8NH00 348 aa13.02□□□□□ -0.33
CXCL12-201ENST00000343575 OR2M2Q96R28 347 aa13.02□□□□□ -0.33
CXCL12-201ENST00000343575 JAM3Q9BX67 310 aa13.02□□□□□ -0.33
CXCL12-201ENST00000343575 MCUBQ9NWR8 336 aa13.02□□□□□ -0.33
CXCL12-201ENST00000343575 GLTPQ9NZD2 209 aa13.02□□□□□ -0.33
CXCL12-201ENST00000343575 ELF5Q9UKW6 265 aaPredicted RBP13.02□□□□□ -0.33
CXCL12-201ENST00000343575 SF3B6Q9Y3B4 125 aaKnown RBP13.02□□□□□ -0.33
CXCL12-201ENST00000343575 TLN1Q9Y490 2541 aaKnown RBP13.01□□□□□ -0.33
CXCL12-201ENST00000343575 A0A1B0GTH9 108 aa13.01□□□□□ -0.33
CXCL12-201ENST00000343575 HLA-DPB1P04440 258 aa13.01□□□□□ -0.33
CXCL12-201ENST00000343575 PTGS2P35354 604 aa13.01□□□□□ -0.33
CXCL12-201ENST00000343575 PHYHD1Q5SRE7 291 aa13.01□□□□□ -0.33
CXCL12-201ENST00000343575 LRFN4Q6PJG9 635 aa13.01□□□□□ -0.33
CXCL12-201ENST00000343575 LHFPL3Q86UP9 236 aa13.01□□□□□ -0.33
CXCL12-201ENST00000343575 TIGD4Q8IY51 512 aa13.01□□□□□ -0.33
CXCL12-201ENST00000343575 C9orf62Q8N4C0 152 aa13.01□□□□□ -0.33
CXCL12-201ENST00000343575 RFLNBQ8N5W9 214 aa13.01□□□□□ -0.33
CXCL12-201ENST00000343575 OR6K6Q8NGW6 343 aa13.01□□□□□ -0.33
CXCL12-201ENST00000343575 PNPLA2Q96AD5 504 aa13.01□□□□□ -0.33
CXCL12-201ENST00000343575 MAP6Q96JE9 813 aa13.01□□□□□ -0.33
CXCL12-201ENST00000343575 FOXN4Q96NZ1 517 aa13.01□□□□□ -0.33
CXCL12-201ENST00000343575 PRORYQ9H606 182 aa13.01□□□□□ -0.33
CXCL12-201ENST00000343575 MOKQ9UQ07 419 aa13.01□□□□□ -0.33
CXCL12-201ENST00000343575 PHF3Q92576 2039 aaKnown RBP13.01□□□□□ -0.33
CXCL12-201ENST00000343575 GTF3C1Q12789 2109 aa13.01□□□□□ -0.33
CXCL12-201ENST00000343575 IGKV3D-15A0A087WSY6 115 aa13□□□□□ -0.33
CXCL12-201ENST00000343575 NPIPA2E9PIF3 369 aa13□□□□□ -0.33
CXCL12-201ENST00000343575 NPIPA3F8WFD2 350 aa13□□□□□ -0.33
CXCL12-201ENST00000343575 CASKO14936 926 aa13□□□□□ -0.33
CXCL12-201ENST00000343575 BET1O15155 118 aa13□□□□□ -0.33
CXCL12-201ENST00000343575 SNAPC5O75971 98 aa13□□□□□ -0.33
CXCL12-201ENST00000343575 TGM6O95932 706 aa13□□□□□ -0.33
CXCL12-201ENST00000343575 DHFRP00374 187 aa13□□□□□ -0.33
CXCL12-201ENST00000343575 CLEC2LP0C7M8 214 aa13□□□□□ -0.33
CXCL12-201ENST00000343575 EDNRAP25101 427 aa13□□□□□ -0.33
CXCL12-201ENST00000343575 APEX1P27695 318 aaKnown RBP13□□□□□ -0.33
CXCL12-201ENST00000343575 NAA10P41227 235 aaPredicted RBP13□□□□□ -0.33
CXCL12-201ENST00000343575 SELENOPP49908 381 aa13□□□□□ -0.33
CXCL12-201ENST00000343575 PER3P56645 1201 aa13□□□□□ -0.33
CXCL12-201ENST00000343575 LGALS3BPQ08380 585 aa13□□□□□ -0.33
CXCL12-201ENST00000343575 ACSM1Q08AH1 577 aa13□□□□□ -0.33
CXCL12-201ENST00000343575 RASGEF1BQ0VAM2 473 aa13□□□□□ -0.33
CXCL12-201ENST00000343575 IL18Q14116 193 aa13□□□□□ -0.33
CXCL12-201ENST00000343575 CARD17Q5XLA6 110 aa13□□□□□ -0.33
CXCL12-201ENST00000343575 SSX6Q7RTT6 188 aa13□□□□□ -0.33
CXCL12-201ENST00000343575 NOXO1Q8NFA2 376 aa13□□□□□ -0.33
CXCL12-201ENST00000343575 LRRC20Q8TCA0 184 aa13□□□□□ -0.33
CXCL12-201ENST00000343575 RADILQ96JH8 1075 aa13□□□□□ -0.33
CXCL12-201ENST00000343575 RERGLQ9H628 205 aa13□□□□□ -0.33
CXCL12-201ENST00000343575 WDR76Q9H967 626 aa13□□□□□ -0.33
CXCL12-201ENST00000343575 MRPL22Q9NWU5 206 aaKnown RBP13□□□□□ -0.33
CXCL12-201ENST00000343575 NLKQ9UBE8 527 aa13□□□□□ -0.33
CXCL12-201ENST00000343575 TUBD1Q9UJT1 453 aa13□□□□□ -0.33
CXCL12-201ENST00000343575 FOXD3Q9UJU5 478 aaPredicted RBP13□□□□□ -0.33
CXCL12-201ENST00000343575 COA3Q9Y2R0 106 aaPredicted RBP13□□□□□ -0.33
CXCL12-201ENST00000343575 TVP23AA6NH52 213 aa12.99□□□□□ -0.33
CXCL12-201ENST00000343575 IGHG1P01857 330 aa12.99□□□□□ -0.33
CXCL12-201ENST00000343575 ZNF85Q03923 595 aa12.99□□□□□ -0.33
CXCL12-201ENST00000343575 BAMBIQ13145 260 aa12.99□□□□□ -0.33
CXCL12-201ENST00000343575 OR2G6Q5TZ20 316 aa12.99□□□□□ -0.33
CXCL12-201ENST00000343575 SLC38A6Q8IZM9 456 aa12.99□□□□□ -0.33
CXCL12-201ENST00000343575 OR8H1Q8NGG4 311 aa12.99□□□□□ -0.33
CXCL12-201ENST00000343575 TMEM54Q969K7 222 aa12.99□□□□□ -0.33
CXCL12-201ENST00000343575 UPRTQ96BW1 309 aa12.99□□□□□ -0.33
CXCL12-201ENST00000343575 ADAD1Q96M93 576 aaKnown RBP12.99□□□□□ -0.33
CXCL12-201ENST00000343575 TBX5Q99593 518 aa12.99□□□□□ -0.33
CXCL12-201ENST00000343575 HDHD5Q9BXW7 423 aa12.99□□□□□ -0.33
CXCL12-201ENST00000343575 COMMD3Q9UBI1 195 aa12.99□□□□□ -0.33
CXCL12-201ENST00000343575 COPS3Q9UNS2 423 aa12.99□□□□□ -0.33
CXCL12-201ENST00000343575 CAMK2AQ9UQM7 478 aa12.99□□□□□ -0.33
CXCL12-201ENST00000343575 FREM1Q5H8C1 2179 aa12.99□□□□□ -0.33
CXCL12-201ENST00000343575 TPRP12270 2363 aaKnown RBP12.99□□□□□ -0.33
CXCL12-201ENST00000343575 TUBAL3A6NHL2 446 aa12.99□□□□□ -0.33
CXCL12-201ENST00000343575 PRR32B1ATL7 298 aa12.99□□□□□ -0.33
CXCL12-201ENST00000343575 AKR7A2O43488 359 aa12.99□□□□□ -0.33
CXCL12-201ENST00000343575 MPZL1O95297 269 aa12.99□□□□□ -0.33
CXCL12-201ENST00000343575 TPOP07202 933 aa12.99□□□□□ -0.33
CXCL12-201ENST00000343575 CRABP1P29762 137 aa12.99□□□□□ -0.33
CXCL12-201ENST00000343575 ATP6V1E1P36543 226 aa12.99□□□□□ -0.33
CXCL12-201ENST00000343575 TGM4P49221 684 aa12.99□□□□□ -0.33
CXCL12-201ENST00000343575 RPS25P62851 125 aaKnown RBP12.99□□□□□ -0.33
CXCL12-201ENST00000343575 TOR2AQ5JU69 321 aa12.99□□□□□ -0.33
CXCL12-201ENST00000343575 THEM4Q5T1C6 240 aa12.99□□□□□ -0.33
CXCL12-201ENST00000343575 SLC25A47Q6Q0C1 308 aa12.99□□□□□ -0.33
CXCL12-201ENST00000343575 LUZP2Q86TE4 346 aa12.99□□□□□ -0.33
CXCL12-201ENST00000343575 ACBD7Q8N6N7 88 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms