RNA–Protein interactions for RNA: ENST00000342988.7

SMAD4-201, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-201ENST00000342988 MMACHCQ9Y4U1 282 aa16.24■□□□□ 0.19
SMAD4-201ENST00000342988 CORINQ9Y5Q5 1042 aa16.24■□□□□ 0.19
SMAD4-201ENST00000342988 NWD2Q9ULI1 1742 aa16.24■□□□□ 0.19
SMAD4-201ENST00000342988 RGPD8O14715 1765 aaPredicted RBP16.24■□□□□ 0.19
SMAD4-201ENST00000342988 SLC6A12P48065 614 aa16.24■□□□□ 0.19
SMAD4-201ENST00000342988 SULT1A1P50225 295 aa16.24■□□□□ 0.19
SMAD4-201ENST00000342988 ZNF280AP59817 542 aaPredicted RBP16.24■□□□□ 0.19
SMAD4-201ENST00000342988 ZNF761Q86XN6 746 aaPredicted RBP16.24■□□□□ 0.19
SMAD4-201ENST00000342988 OR5AR1Q8NGP9 310 aa16.24■□□□□ 0.19
SMAD4-201ENST00000342988 SLC7A6Q92536 515 aa16.24■□□□□ 0.19
SMAD4-201ENST00000342988 CEP250Q9BV73 2442 aa16.24■□□□□ 0.19
SMAD4-201ENST00000342988 SLC25A4P12235 298 aa16.24■□□□□ 0.19
SMAD4-201ENST00000342988 ARR3P36575 388 aa16.24■□□□□ 0.19
SMAD4-201ENST00000342988 RPL30P62888 115 aaKnown RBP16.24■□□□□ 0.19
SMAD4-201ENST00000342988 DHRS13Q6UX07 377 aa16.24■□□□□ 0.19
SMAD4-201ENST00000342988 OR52R1Q8NGF1 315 aa16.24■□□□□ 0.19
SMAD4-201ENST00000342988 USP3Q9Y6I4 520 aa16.24■□□□□ 0.19
SMAD4-201ENST00000342988 SLIT2O94813 1529 aa16.24■□□□□ 0.19
SMAD4-201ENST00000342988 ZNF140P52738 457 aaPredicted RBP16.24■□□□□ 0.19
SMAD4-201ENST00000342988 BTG1P62324 171 aa16.24■□□□□ 0.19
SMAD4-201ENST00000342988 DYRK2Q92630 601 aa16.24■□□□□ 0.19
SMAD4-201ENST00000342988 GAL3ST2Q9H3Q3 398 aa16.24■□□□□ 0.19
SMAD4-201ENST00000342988 ANXA10Q9UJ72 324 aa16.24■□□□□ 0.19
SMAD4-201ENST00000342988 SEMA7AO75326 666 aa16.23■□□□□ 0.19
SMAD4-201ENST00000342988 TMEM176BQ3YBM2 270 aaPredicted RBP16.23■□□□□ 0.19
SMAD4-201ENST00000342988 NAGSQ8N159 534 aa16.23■□□□□ 0.19
SMAD4-201ENST00000342988 OR10A7Q8NGE5 316 aa16.23■□□□□ 0.19
SMAD4-201ENST00000342988 NOVA1P51513 510 aaKnown RBP16.23■□□□□ 0.19
SMAD4-201ENST00000342988 NAGKQ9UJ70 344 aa16.23■□□□□ 0.19
SMAD4-201ENST00000342988 LSM2Q9Y333 95 aaKnown RBP16.23■□□□□ 0.19
SMAD4-201ENST00000342988 TNFRSF1BP20333 461 aa16.23■□□□□ 0.19
SMAD4-201ENST00000342988 SLC35D3Q5M8T2 416 aa16.23■□□□□ 0.19
SMAD4-201ENST00000342988 TMEM65Q6PI78 240 aa16.23■□□□□ 0.19
SMAD4-201ENST00000342988 ERGIC1Q969X5 290 aa16.23■□□□□ 0.19
SMAD4-201ENST00000342988 FAM117AQ9C073 453 aa16.23■□□□□ 0.19
SMAD4-201ENST00000342988 CDCP1Q9H5V8 836 aa16.23■□□□□ 0.19
SMAD4-201ENST00000342988 CD207Q9UJ71 328 aa16.23■□□□□ 0.19
SMAD4-201ENST00000342988 GPR31O00270 319 aa16.23■□□□□ 0.19
SMAD4-201ENST00000342988 TCRBP04435 133 aa16.23■□□□□ 0.19
SMAD4-201ENST00000342988 ZNF816Q0VGE8 651 aaPredicted RBP16.23■□□□□ 0.19
SMAD4-201ENST00000342988 PMS2P11Q13670 270 aa16.23■□□□□ 0.19
SMAD4-201ENST00000342988 ZADH2Q8N4Q0 377 aa16.23■□□□□ 0.19
SMAD4-201ENST00000342988 ACOT4Q8N9L9 421 aa16.23■□□□□ 0.19
SMAD4-201ENST00000342988 NEIL1Q96FI4 390 aaPredicted RBP16.23■□□□□ 0.19
SMAD4-201ENST00000342988 ZNF629Q9UEG4 869 aaPredicted RBP16.23■□□□□ 0.19
SMAD4-201ENST00000342988 TRABD2BA6NFA1 517 aa16.23■□□□□ 0.19
SMAD4-201ENST00000342988 NCR1O76036 304 aa16.23■□□□□ 0.19
SMAD4-201ENST00000342988 ADPRMQ3LIE5 342 aa16.23■□□□□ 0.19
SMAD4-201ENST00000342988 MRPL2Q5T653 305 aaKnown RBP16.23■□□□□ 0.19
SMAD4-201ENST00000342988 DPY19L2P2Q6ZN68 376 aa16.23■□□□□ 0.19
SMAD4-201ENST00000342988 LAX1Q8IWV1 398 aa16.23■□□□□ 0.19
SMAD4-201ENST00000342988 ACKR1Q16570 336 aa16.23■□□□□ 0.19
SMAD4-201ENST00000342988 ABI3BPQ7Z7G0 1075 aa16.23■□□□□ 0.19
SMAD4-201ENST00000342988 TMEM116Q8NCL8 245 aa16.23■□□□□ 0.19
SMAD4-201ENST00000342988 MEGF6O75095 1541 aa16.22■□□□□ 0.19
SMAD4-201ENST00000342988 CLECL1Q8IZS7 167 aa16.22■□□□□ 0.19
SMAD4-201ENST00000342988 FYTTD1Q96QD9 318 aaKnown RBP16.22■□□□□ 0.19
SMAD4-201ENST00000342988 CD1EP15812 388 aa16.22■□□□□ 0.19
SMAD4-201ENST00000342988 KIR2DL1P43626 348 aaPredicted RBP16.22■□□□□ 0.19
SMAD4-201ENST00000342988 KIR2DL2P43627 348 aaPredicted RBP16.22■□□□□ 0.19
SMAD4-201ENST00000342988 DCAF12L1Q5VU92 463 aa16.22■□□□□ 0.19
SMAD4-201ENST00000342988 OR4D10Q8NGI6 311 aa16.22■□□□□ 0.19
SMAD4-201ENST00000342988 RHBDD1Q8TEB9 315 aa16.22■□□□□ 0.19
SMAD4-201ENST00000342988 SLC38A5Q8WUX1 472 aa16.22■□□□□ 0.19
SMAD4-201ENST00000342988 SHHQ15465 462 aa16.22■□□□□ 0.19
SMAD4-201ENST00000342988 GPR61Q9BZJ8 451 aa16.22■□□□□ 0.19
SMAD4-201ENST00000342988 NDRG4Q9ULP0 352 aaKnown RBP16.22■□□□□ 0.19
SMAD4-201ENST00000342988 ACRP10323 421 aa16.22■□□□□ 0.19
SMAD4-201ENST00000342988 HIST1H1TP22492 207 aaPredicted RBP16.22■□□□□ 0.19
SMAD4-201ENST00000342988 UBE2MP61081 183 aaKnown RBP16.22■□□□□ 0.19
SMAD4-201ENST00000342988 LMAN2Q12907 356 aa16.22■□□□□ 0.19
SMAD4-201ENST00000342988 GPX8Q8TED1 209 aa16.22■□□□□ 0.19
SMAD4-201ENST00000342988 SMG9Q9H0W8 520 aaKnown RBP16.22■□□□□ 0.19
SMAD4-201ENST00000342988 CALHM2Q9HA72 323 aa16.22■□□□□ 0.19
SMAD4-201ENST00000342988 SLC23A1Q9UHI7 598 aa16.22■□□□□ 0.19
SMAD4-201ENST00000342988 SIAH3Q8IW03 269 aa16.22■□□□□ 0.19
SMAD4-201ENST00000342988 IFT22Q9H7X7 185 aa16.22■□□□□ 0.19
SMAD4-201ENST00000342988 C6orf132Q5T0Z8 1188 aa16.21■□□□□ 0.19
SMAD4-201ENST00000342988 ZNF429Q86V71 674 aa16.21■□□□□ 0.19
SMAD4-201ENST00000342988 NAT8BQ9UHF3 227 aa16.21■□□□□ 0.19
SMAD4-201ENST00000342988 MED1Q15648 1581 aaPredicted RBP16.21■□□□□ 0.19
SMAD4-201ENST00000342988 COCHO43405 550 aa16.21■□□□□ 0.19
SMAD4-201ENST00000342988 TTRP02766 147 aa16.21■□□□□ 0.19
SMAD4-201ENST00000342988 HTR1FP30939 366 aa16.21■□□□□ 0.19
SMAD4-201ENST00000342988 ALKBH1Q13686 389 aaKnown RBP16.21■□□□□ 0.19
SMAD4-201ENST00000342988 THYN1Q9P016 225 aa16.21■□□□□ 0.19
SMAD4-201ENST00000342988 UFC1Q9Y3C8 167 aa16.21■□□□□ 0.19
SMAD4-201ENST00000342988 CCDC187A0A096LP49 1063 aa16.21■□□□□ 0.19
SMAD4-201ENST00000342988 DOK2O60496 412 aa16.21■□□□□ 0.19
SMAD4-201ENST00000342988 IRS1P35568 1242 aa16.21■□□□□ 0.19
SMAD4-201ENST00000342988 OR2D3Q8NGH3 330 aa16.21■□□□□ 0.19
SMAD4-201ENST00000342988 OR52L2PQ8NGH6 319 aa16.21■□□□□ 0.19
SMAD4-201ENST00000342988 KCND3Q9UK17 655 aa16.21■□□□□ 0.19
SMAD4-201ENST00000342988 ITGB7P26010 798 aa16.21■□□□□ 0.19
SMAD4-201ENST00000342988 TNFRSF17Q02223 184 aa16.21■□□□□ 0.19
SMAD4-201ENST00000342988 SMIM21Q3B7S5 101 aa16.21■□□□□ 0.19
SMAD4-201ENST00000342988 CHST14Q8NCH0 376 aa16.21■□□□□ 0.19
SMAD4-201ENST00000342988 ADAT1Q9BUB4 502 aaKnown RBP16.21■□□□□ 0.19
SMAD4-201ENST00000342988 CHRNA10Q9GZZ6 450 aa16.21■□□□□ 0.19
SMAD4-201ENST00000342988 TCFL5Q9UL49 500 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms