RNA–Protein interactions for RNA: ENST00000342494.7

UBE3B-202, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,722 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-202ENST00000342494 TRGV5A0A0B4J1U4 118 aa13.65□□□□□ -0.22
UBE3B-202ENST00000342494 BHLHE40O14503 412 aa13.65□□□□□ -0.22
UBE3B-202ENST00000342494 F2RP25116 425 aa13.65□□□□□ -0.22
UBE3B-202ENST00000342494 PIGAP37287 484 aa13.65□□□□□ -0.22
UBE3B-202ENST00000342494 POU4F3Q15319 338 aa13.65□□□□□ -0.22
UBE3B-202ENST00000342494 RTL8BQ17RB0 113 aa13.65□□□□□ -0.22
UBE3B-202ENST00000342494 ZNF628Q5EBL2 1059 aa13.65□□□□□ -0.22
UBE3B-202ENST00000342494 KDM4DQ6B0I6 523 aa13.65□□□□□ -0.22
UBE3B-202ENST00000342494 RGS7BPQ6MZT1 257 aaPredicted RBP13.65□□□□□ -0.22
UBE3B-202ENST00000342494 PLXDC2Q6UX71 529 aa13.65□□□□□ -0.22
UBE3B-202ENST00000342494 LHFPL2Q6ZUX7 228 aa13.65□□□□□ -0.22
UBE3B-202ENST00000342494 OR2L13Q8N349 312 aa13.65□□□□□ -0.22
UBE3B-202ENST00000342494 FBXO17Q96EF6 278 aa13.65□□□□□ -0.22
UBE3B-202ENST00000342494 ATF6BQ99941 703 aa13.65□□□□□ -0.22
UBE3B-202ENST00000342494 I6L893 689 aaPredicted RBP13.65□□□□□ -0.22
UBE3B-202ENST00000342494 SPI1P17947 270 aa13.65□□□□□ -0.22
UBE3B-202ENST00000342494 BSGP35613 385 aa13.65□□□□□ -0.22
UBE3B-202ENST00000342494 RPL34P49207 117 aaKnown RBP13.65□□□□□ -0.22
UBE3B-202ENST00000342494 ZNF266Q14584 549 aa13.65□□□□□ -0.22
UBE3B-202ENST00000342494 SHBQ15464 509 aa13.65□□□□□ -0.22
UBE3B-202ENST00000342494 ZNF385BQ569K4 471 aa13.65□□□□□ -0.22
UBE3B-202ENST00000342494 LAIR1Q6GTX8 287 aa13.65□□□□□ -0.22
UBE3B-202ENST00000342494 Q6ZRG5 221 aa13.65□□□□□ -0.22
UBE3B-202ENST00000342494 TUBG2Q9NRH3 451 aa13.65□□□□□ -0.22
UBE3B-202ENST00000342494 PLA2G3Q9NZ20 509 aa13.65□□□□□ -0.22
UBE3B-202ENST00000342494 BTAF1O14981 1849 aa13.65□□□□□ -0.22
UBE3B-202ENST00000342494 UBE2G2P60604 165 aa13.65□□□□□ -0.22
UBE3B-202ENST00000342494 OR52H1Q8NGJ2 320 aa13.65□□□□□ -0.22
UBE3B-202ENST00000342494 SEH1LQ96EE3 360 aa13.65□□□□□ -0.22
UBE3B-202ENST00000342494 PRRX2Q99811 253 aa13.65□□□□□ -0.22
UBE3B-202ENST00000342494 SLX4Q8IY92 1834 aa13.65□□□□□ -0.22
UBE3B-202ENST00000342494 UPK1AO00322 258 aa13.65□□□□□ -0.22
UBE3B-202ENST00000342494 ATP1B1P05026 303 aa13.65□□□□□ -0.22
UBE3B-202ENST00000342494 B4GALT1P15291 398 aa13.65□□□□□ -0.22
UBE3B-202ENST00000342494 ARSGQ96EG1 525 aa13.65□□□□□ -0.22
UBE3B-202ENST00000342494 TECTBQ96PL2 329 aa13.65□□□□□ -0.22
UBE3B-202ENST00000342494 YBX2Q9Y2T7 364 aaKnown RBP13.65□□□□□ -0.22
UBE3B-202ENST00000342494 HDGFL3Q9Y3E1 203 aa13.65□□□□□ -0.22
UBE3B-202ENST00000342494 SRP9P49458 86 aaKnown RBP13.65□□□□□ -0.23
UBE3B-202ENST00000342494 ZNF766Q5HY98 468 aa13.65□□□□□ -0.23
UBE3B-202ENST00000342494 ZNF486Q96H40 463 aaPredicted RBP13.65□□□□□ -0.23
UBE3B-202ENST00000342494 REEP6Q96HR9 211 aa13.65□□□□□ -0.23
UBE3B-202ENST00000342494 ARID1BQ8NFD5 2236 aaPredicted RBP13.65□□□□□ -0.23
UBE3B-202ENST00000342494 FITM1A5D6W6 292 aa13.64□□□□□ -0.23
UBE3B-202ENST00000342494 ANKRD61A6NGH8 418 aa13.64□□□□□ -0.23
UBE3B-202ENST00000342494 MBTPS2O43462 519 aa13.64□□□□□ -0.23
UBE3B-202ENST00000342494 UBE2KP61086 200 aa13.64□□□□□ -0.23
UBE3B-202ENST00000342494 NUDT8Q8WV74 236 aa13.64□□□□□ -0.23
UBE3B-202ENST00000342494 FCRL1Q96LA6 429 aa13.64□□□□□ -0.23
UBE3B-202ENST00000342494 FAM173AQ9BQD7 235 aa13.64□□□□□ -0.23
UBE3B-202ENST00000342494 NAA50Q9GZZ1 169 aaKnown RBP13.64□□□□□ -0.23
UBE3B-202ENST00000342494 GPR84Q9NQS5 396 aa13.64□□□□□ -0.23
UBE3B-202ENST00000342494 CLEC2DQ9UHP7 191 aa13.64□□□□□ -0.23
UBE3B-202ENST00000342494 RPS2P15880 293 aaKnown RBP13.64□□□□□ -0.23
UBE3B-202ENST00000342494 DSCR4P56555 118 aaPredicted RBP13.64□□□□□ -0.23
UBE3B-202ENST00000342494 FOXF1Q12946 379 aa13.64□□□□□ -0.23
UBE3B-202ENST00000342494 HIST2H3PS2Q5TEC6 136 aa13.64□□□□□ -0.23
UBE3B-202ENST00000342494 SSX9Q7RTT3 188 aa13.64□□□□□ -0.23
UBE3B-202ENST00000342494 OR2A14Q96R47 310 aa13.64□□□□□ -0.23
UBE3B-202ENST00000342494 ZCCHC4Q9H5U6 513 aa13.64□□□□□ -0.23
UBE3B-202ENST00000342494 CMC2Q9NRP2 79 aa13.64□□□□□ -0.23
UBE3B-202ENST00000342494 AQP7O14520 342 aa13.64□□□□□ -0.23
UBE3B-202ENST00000342494 ELK1P19419 428 aa13.64□□□□□ -0.23
UBE3B-202ENST00000342494 ZNF620Q6ZNG0 422 aa13.64□□□□□ -0.23
UBE3B-202ENST00000342494 FBXL14Q8N1E6 418 aa13.64□□□□□ -0.23
UBE3B-202ENST00000342494 ARPC5LQ9BPX5 153 aa13.64□□□□□ -0.23
UBE3B-202ENST00000342494 P4HTMQ9NXG6 502 aa13.64□□□□□ -0.23
UBE3B-202ENST00000342494 COPS3Q9UNS2 423 aa13.64□□□□□ -0.23
UBE3B-202ENST00000342494 ZC3H12DA2A288 527 aaKnown RBP13.64□□□□□ -0.23
UBE3B-202ENST00000342494 SNAPINO95295 136 aa13.64□□□□□ -0.23
UBE3B-202ENST00000342494 MGST1P10620 155 aaKnown RBP13.64□□□□□ -0.23
UBE3B-202ENST00000342494 FOLR1P15328 257 aa13.64□□□□□ -0.23
UBE3B-202ENST00000342494 TESK1Q15569 626 aa13.64□□□□□ -0.23
UBE3B-202ENST00000342494 SIAH3Q8IW03 269 aa13.64□□□□□ -0.23
UBE3B-202ENST00000342494 OR51A4Q8NGJ6 313 aa13.64□□□□□ -0.23
UBE3B-202ENST00000342494 TCEAL2Q9H3H9 227 aaPredicted RBP13.64□□□□□ -0.23
UBE3B-202ENST00000342494 SMCO4Q9NRQ5 59 aa13.64□□□□□ -0.23
UBE3B-202ENST00000342494 APEX1P27695 318 aaKnown RBP13.63□□□□□ -0.23
UBE3B-202ENST00000342494 TRIP6Q15654 476 aaKnown RBP13.63□□□□□ -0.23
UBE3B-202ENST00000342494 DLEU7Q6UYE1 221 aa13.63□□□□□ -0.23
UBE3B-202ENST00000342494 ITPKCQ96DU7 683 aa13.63□□□□□ -0.23
UBE3B-202ENST00000342494 PRSS37A4D1T9 235 aa13.63□□□□□ -0.23
UBE3B-202ENST00000342494 WDR1O75083 606 aa13.63□□□□□ -0.23
UBE3B-202ENST00000342494 PCSK6P29122 969 aa13.63□□□□□ -0.23
UBE3B-202ENST00000342494 RPS16P62249 146 aaKnown RBP13.63□□□□□ -0.23
UBE3B-202ENST00000342494 ZDHHC23Q8IYP9 409 aa13.63□□□□□ -0.23
UBE3B-202ENST00000342494 GABRG1Q8N1C3 465 aa13.63□□□□□ -0.23
UBE3B-202ENST00000342494 TMEM102Q8N9M5 508 aaPredicted RBP13.63□□□□□ -0.23
UBE3B-202ENST00000342494 UBAC2Q8NBM4 344 aa13.63□□□□□ -0.23
UBE3B-202ENST00000342494 S1PR5Q9H228 398 aa13.63□□□□□ -0.23
UBE3B-202ENST00000342494 TXNIPQ9H3M7 391 aa13.63□□□□□ -0.23
UBE3B-202ENST00000342494 ACER3Q9NUN7 267 aa13.63□□□□□ -0.23
UBE3B-202ENST00000342494 PHIPQ8WWQ0 1821 aa13.63□□□□□ -0.23
UBE3B-202ENST00000342494 DHHO43323 396 aa13.63□□□□□ -0.23
UBE3B-202ENST00000342494 GALR2O43603 387 aaPredicted RBP13.63□□□□□ -0.23
UBE3B-202ENST00000342494 IL11RAQ14626 422 aa13.63□□□□□ -0.23
UBE3B-202ENST00000342494 ASTLQ6HA08 431 aaPredicted RBP13.63□□□□□ -0.23
UBE3B-202ENST00000342494 HSD17B11Q8NBQ5 300 aa13.63□□□□□ -0.23
UBE3B-202ENST00000342494 OR6K3Q8NGY3 331 aa13.63□□□□□ -0.23
UBE3B-202ENST00000342494 MRPS24Q96EL2 167 aaKnown RBP13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms