RNA–Protein interactions for RNA: ENST00000341485.9

TPM3-208, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,063 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-208ENST00000341485 TSC22D2O75157 780 aa13.4□□□□□ -0.27
TPM3-208ENST00000341485 SELENOPP49908 381 aa13.4□□□□□ -0.27
TPM3-208ENST00000341485 DLX5P56178 289 aa13.4□□□□□ -0.27
TPM3-208ENST00000341485 TMEM225Q6GV28 225 aa13.4□□□□□ -0.27
TPM3-208ENST00000341485 LYPD8Q6UX82 237 aa13.4□□□□□ -0.27
TPM3-208ENST00000341485 ZNF782Q6ZMW2 699 aaPredicted RBP13.4□□□□□ -0.27
TPM3-208ENST00000341485 FAM3DQ96BQ1 224 aa13.4□□□□□ -0.27
TPM3-208ENST00000341485 SPACA9Q96E40 222 aaPredicted RBP13.4□□□□□ -0.27
TPM3-208ENST00000341485 SEC22CQ9BRL7 303 aa13.4□□□□□ -0.27
TPM3-208ENST00000341485 NOX3Q9HBY0 568 aa13.4□□□□□ -0.27
TPM3-208ENST00000341485 NPIPA1Q9UND3 350 aa13.4□□□□□ -0.27
TPM3-208ENST00000341485 SDK2Q58EX2 2172 aa13.39□□□□□ -0.27
TPM3-208ENST00000341485 ARPC4-TTLL3A0A0A6YYG9 625 aa13.39□□□□□ -0.27
TPM3-208ENST00000341485 A0A1W2PQ72 361 aa13.39□□□□□ -0.27
TPM3-208ENST00000341485 CIB4A0PJX0 185 aa13.39□□□□□ -0.27
TPM3-208ENST00000341485 C21orf140B9A014 251 aa13.39□□□□□ -0.27
TPM3-208ENST00000341485 KDM4BO94953 1096 aa13.39□□□□□ -0.27
TPM3-208ENST00000341485 ICAM2P13598 275 aa13.39□□□□□ -0.27
TPM3-208ENST00000341485 MFSD13AQ14CX5 517 aa13.39□□□□□ -0.27
TPM3-208ENST00000341485 C2orf76Q3KRA6 126 aa13.39□□□□□ -0.27
TPM3-208ENST00000341485 METTL11BQ5VVY1 283 aa13.39□□□□□ -0.27
TPM3-208ENST00000341485 NLRC3Q7RTR2 1065 aa13.39□□□□□ -0.27
TPM3-208ENST00000341485 PLPP7Q8NBV4 271 aa13.39□□□□□ -0.27
TPM3-208ENST00000341485 OR10G3Q8NGC4 313 aa13.39□□□□□ -0.27
TPM3-208ENST00000341485 KCNK17Q96T54 332 aa13.39□□□□□ -0.27
TPM3-208ENST00000341485 GPR87Q9BY21 358 aa13.39□□□□□ -0.27
TPM3-208ENST00000341485 ZNF436Q9C0F3 470 aaPredicted RBP13.39□□□□□ -0.27
TPM3-208ENST00000341485 CDCP1Q9H5V8 836 aa13.39□□□□□ -0.27
TPM3-208ENST00000341485 CHST11Q9NPF2 352 aa13.39□□□□□ -0.27
TPM3-208ENST00000341485 MED29Q9NX70 200 aa13.39□□□□□ -0.27
TPM3-208ENST00000341485 TAS2R4Q9NYW5 299 aa13.39□□□□□ -0.27
TPM3-208ENST00000341485 R4GMQ9 66 aa13.39□□□□□ -0.27
TPM3-208ENST00000341485 LOC100289279A0A1B0GTE1 492 aa13.38□□□□□ -0.27
TPM3-208ENST00000341485 STMND1H3BQB6 276 aa13.38□□□□□ -0.27
TPM3-208ENST00000341485 H7C417 338 aa13.38□□□□□ -0.27
TPM3-208ENST00000341485 TP53I11O14683 189 aa13.38□□□□□ -0.27
TPM3-208ENST00000341485 EFNA2O43921 213 aa13.38□□□□□ -0.27
TPM3-208ENST00000341485 DOK2O60496 412 aa13.38□□□□□ -0.27
TPM3-208ENST00000341485 DKK1O94907 266 aa13.38□□□□□ -0.27
TPM3-208ENST00000341485 NDUFB6O95139 128 aa13.38□□□□□ -0.27
TPM3-208ENST00000341485 HPP00738 406 aa13.38□□□□□ -0.27
TPM3-208ENST00000341485 IGFBP3P17936 291 aaPredicted RBP13.38□□□□□ -0.27
TPM3-208ENST00000341485 DAP3P51398 398 aaKnown RBP13.38□□□□□ -0.27
TPM3-208ENST00000341485 POU3F1Q03052 451 aaPredicted RBP13.38□□□□□ -0.27
TPM3-208ENST00000341485 SLC25A25Q6KCM7 469 aa13.38□□□□□ -0.27
TPM3-208ENST00000341485 DCXRQ7Z4W1 244 aa13.38□□□□□ -0.27
TPM3-208ENST00000341485 LINC00346Q8IVM7 164 aa13.38□□□□□ -0.27
TPM3-208ENST00000341485 SLC25A28Q96A46 364 aa13.38□□□□□ -0.27
TPM3-208ENST00000341485 UTP23Q9BRU9 249 aaKnown RBP13.38□□□□□ -0.27
TPM3-208ENST00000341485 NPDC1Q9NQX5 325 aaPredicted RBP13.38□□□□□ -0.27
TPM3-208ENST00000341485 SDHAF3Q9NRP4 125 aa13.38□□□□□ -0.27
TPM3-208ENST00000341485 PPP4R1LQ9P1A2 415 aa13.38□□□□□ -0.27
TPM3-208ENST00000341485 MTFP1Q9UDX5 166 aa13.38□□□□□ -0.27
TPM3-208ENST00000341485 SCP2D1Q9UJQ7 156 aa13.38□□□□□ -0.27
TPM3-208ENST00000341485 EMC9Q9Y3B6 208 aa13.38□□□□□ -0.27
TPM3-208ENST00000341485 PCNX2A6NKB5 2137 aa13.38□□□□□ -0.27
TPM3-208ENST00000341485 TMEM272A0A1B0GTI8 110 aa13.38□□□□□ -0.27
TPM3-208ENST00000341485 G3V3Q6 166 aa13.38□□□□□ -0.27
TPM3-208ENST00000341485 MASP2O00187 686 aa13.38□□□□□ -0.27
TPM3-208ENST00000341485 ZNF208O43345 1280 aa13.38□□□□□ -0.27
TPM3-208ENST00000341485 ICMTO60725 284 aa13.38□□□□□ -0.27
TPM3-208ENST00000341485 ZNF823P16415 610 aa13.38□□□□□ -0.27
TPM3-208ENST00000341485 FSTP19883 344 aa13.38□□□□□ -0.27
TPM3-208ENST00000341485 ANXA7P20073 488 aaKnown RBP13.38□□□□□ -0.27
TPM3-208ENST00000341485 DNASE1P24855 282 aa13.38□□□□□ -0.27
TPM3-208ENST00000341485 GNG2P59768 71 aa13.38□□□□□ -0.27
TPM3-208ENST00000341485 GABREP78334 506 aa13.38□□□□□ -0.27
TPM3-208ENST00000341485 HSF1Q00613 529 aa13.38□□□□□ -0.27
TPM3-208ENST00000341485 GUCA2AQ02747 115 aa13.38□□□□□ -0.27
TPM3-208ENST00000341485 TLE3Q04726 772 aa13.38□□□□□ -0.27
TPM3-208ENST00000341485 PCK2Q16822 640 aa13.38□□□□□ -0.27
TPM3-208ENST00000341485 PCGF3Q3KNV8 242 aa13.38□□□□□ -0.27
TPM3-208ENST00000341485 DNM1P34Q6PK57 102 aa13.38□□□□□ -0.27
TPM3-208ENST00000341485 OPN5Q6U736 354 aa13.38□□□□□ -0.27
TPM3-208ENST00000341485 GLDNQ6ZMI3 551 aaPredicted RBP13.38□□□□□ -0.27
TPM3-208ENST00000341485 OR1J4Q8NGS1 313 aa13.38□□□□□ -0.27
TPM3-208ENST00000341485 ST7LQ8TDW4 575 aa13.38□□□□□ -0.27
TPM3-208ENST00000341485 DDIT4LQ96D03 193 aa13.38□□□□□ -0.27
TPM3-208ENST00000341485 G6PC2Q9NQR9 355 aa13.38□□□□□ -0.27
TPM3-208ENST00000341485 DIABLOQ9NR28 239 aa13.38□□□□□ -0.27
TPM3-208ENST00000341485 OTOGLQ3ZCN5 2332 aa13.37□□□□□ -0.27
TPM3-208ENST00000341485 TRAV18A0A075B6X5 111 aa13.37□□□□□ -0.27
TPM3-208ENST00000341485 NPIPB13A6NJU9 1138 aa13.37□□□□□ -0.27
TPM3-208ENST00000341485 LIPT2A6NK58 231 aa13.37□□□□□ -0.27
TPM3-208ENST00000341485 NPIPB4C9JG80 1138 aa13.37□□□□□ -0.27
TPM3-208ENST00000341485 H3BML4 177 aa13.37□□□□□ -0.27
TPM3-208ENST00000341485 ETV2O00321 342 aaPredicted RBP13.37□□□□□ -0.27
TPM3-208ENST00000341485 RBBP9O75884 186 aa13.37□□□□□ -0.27
TPM3-208ENST00000341485 TPOP07202 933 aa13.37□□□□□ -0.27
TPM3-208ENST00000341485 PTGDSP41222 190 aa13.37□□□□□ -0.27
TPM3-208ENST00000341485 SSR4P51571 173 aa13.37□□□□□ -0.27
TPM3-208ENST00000341485 PER3P56645 1201 aa13.37□□□□□ -0.27
TPM3-208ENST00000341485 RPS19BP1Q86WX3 136 aaKnown RBP13.37□□□□□ -0.27
TPM3-208ENST00000341485 OR8H1Q8NGG4 311 aa13.37□□□□□ -0.27
TPM3-208ENST00000341485 B3GNT4Q9C0J1 378 aa13.37□□□□□ -0.27
TPM3-208ENST00000341485 METTL17Q9H7H0 456 aaPredicted RBP13.37□□□□□ -0.27
TPM3-208ENST00000341485 P4HTMQ9NXG6 502 aa13.37□□□□□ -0.27
TPM3-208ENST00000341485 CDV3Q9UKY7 258 aaKnown RBP13.37□□□□□ -0.27
TPM3-208ENST00000341485 LOC101059948A0A1B0GTJ6 334 aa13.36□□□□□ -0.27
TPM3-208ENST00000341485 LGALSLQ3ZCW2 172 aaPredicted RBP13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms