RNA–Protein interactions for RNA: ENST00000341060.3

TDP2-201, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TDP2, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-201ENST00000341060 DHRS9Q9BPW9 319 aa13.01□□□□□ -0.33
TDP2-201ENST00000341060 NUDT22Q9BRQ3 303 aa13.01□□□□□ -0.33
TDP2-201ENST00000341060 UPB1Q9UBR1 384 aa13.01□□□□□ -0.33
TDP2-201ENST00000341060 WDFY4Q6ZS81 3184 aa13.01□□□□□ -0.33
TDP2-201ENST00000341060 IGKV1D-43A0A0B4J1Z2 117 aa13.01□□□□□ -0.33
TDP2-201ENST00000341060 C2orf72A6NCS6 295 aa13.01□□□□□ -0.33
TDP2-201ENST00000341060 F5H5P2 479 aa13.01□□□□□ -0.33
TDP2-201ENST00000341060 GOSR2O14653 212 aa13.01□□□□□ -0.33
TDP2-201ENST00000341060 ZNF208O43345 1280 aa13.01□□□□□ -0.33
TDP2-201ENST00000341060 SIX6O95475 246 aa13.01□□□□□ -0.33
TDP2-201ENST00000341060 FCER2P06734 321 aa13.01□□□□□ -0.33
TDP2-201ENST00000341060 GIMD1P0DJR0 217 aa13.01□□□□□ -0.33
TDP2-201ENST00000341060 MYF5P13349 255 aa13.01□□□□□ -0.33
TDP2-201ENST00000341060 UBE2MP61081 183 aaKnown RBP13.01□□□□□ -0.33
TDP2-201ENST00000341060 HSF1Q00613 529 aa13.01□□□□□ -0.33
TDP2-201ENST00000341060 OC90Q02509 493 aaPredicted RBP13.01□□□□□ -0.33
TDP2-201ENST00000341060 TLE3Q04726 772 aa13.01□□□□□ -0.33
TDP2-201ENST00000341060 SPOCK1Q08629 439 aa13.01□□□□□ -0.33
TDP2-201ENST00000341060 C1orf100Q5SVJ3 147 aa13.01□□□□□ -0.33
TDP2-201ENST00000341060 TMEM244Q5VVB8 128 aa13.01□□□□□ -0.33
TDP2-201ENST00000341060 LINC00346Q8IVM7 164 aa13.01□□□□□ -0.33
TDP2-201ENST00000341060 JAGN1Q8N5M9 183 aa13.01□□□□□ -0.33
TDP2-201ENST00000341060 NFAM1Q8NET5 270 aaPredicted RBP13.01□□□□□ -0.33
TDP2-201ENST00000341060 NUBPLQ8TB37 319 aa13.01□□□□□ -0.33
TDP2-201ENST00000341060 DDIT4LQ96D03 193 aa13.01□□□□□ -0.33
TDP2-201ENST00000341060 CMKLR1Q99788 373 aa13.01□□□□□ -0.33
TDP2-201ENST00000341060 NARFLQ9H6Q4 476 aa13.01□□□□□ -0.33
TDP2-201ENST00000341060 CHST11Q9NPF2 352 aa13.01□□□□□ -0.33
TDP2-201ENST00000341060 ZNF107Q9UII5 783 aaPredicted RBP13.01□□□□□ -0.33
TDP2-201ENST00000341060 NUP50Q9UKX7 468 aa13.01□□□□□ -0.33
TDP2-201ENST00000341060 DMDP11532 3685 aa13□□□□□ -0.33
TDP2-201ENST00000341060 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13□□□□□ -0.33
TDP2-201ENST00000341060 ZSCAN5BA6NJL1 495 aa13□□□□□ -0.33
TDP2-201ENST00000341060 ARPC5O15511 151 aa13□□□□□ -0.33
TDP2-201ENST00000341060 RAB3DO95716 219 aa13□□□□□ -0.33
TDP2-201ENST00000341060 MMP16P51512 607 aa13□□□□□ -0.33
TDP2-201ENST00000341060 AFF3P51826 1226 aaKnown RBP13□□□□□ -0.33
TDP2-201ENST00000341060 CAPZA1P52907 286 aa13□□□□□ -0.33
TDP2-201ENST00000341060 C4orf46Q504U0 113 aa13□□□□□ -0.33
TDP2-201ENST00000341060 DCAF12L2Q5VW00 463 aa13□□□□□ -0.33
TDP2-201ENST00000341060 TSSK4Q6SA08 328 aa13□□□□□ -0.33
TDP2-201ENST00000341060 TMEM205Q6UW68 189 aa13□□□□□ -0.33
TDP2-201ENST00000341060 ARSKQ6UWY0 536 aa13□□□□□ -0.33
TDP2-201ENST00000341060 ANKRD37Q7Z713 158 aa13□□□□□ -0.33
TDP2-201ENST00000341060 CCDC107Q8WV48 283 aa13□□□□□ -0.33
TDP2-201ENST00000341060 RNF133Q8WVZ7 376 aa13□□□□□ -0.33
TDP2-201ENST00000341060 SLC25A21Q9BQT8 299 aaPredicted RBP13□□□□□ -0.33
TDP2-201ENST00000341060 MESP1Q9BRJ9 268 aa13□□□□□ -0.33
TDP2-201ENST00000341060 CHST6Q9GZX3 395 aa13□□□□□ -0.33
TDP2-201ENST00000341060 POFUT1Q9H488 388 aa13□□□□□ -0.33
TDP2-201ENST00000341060 TMEM138Q9NPI0 162 aa13□□□□□ -0.33
TDP2-201ENST00000341060 FANCFQ9NPI8 374 aa13□□□□□ -0.33
TDP2-201ENST00000341060 MED29Q9NX70 200 aa13□□□□□ -0.33
TDP2-201ENST00000341060 VDAC3Q9Y277 283 aa13□□□□□ -0.33
TDP2-201ENST00000341060 RHBDD3Q9Y3P4 386 aa13□□□□□ -0.33
TDP2-201ENST00000341060 CACNA1EQ15878 2313 aa13□□□□□ -0.33
TDP2-201ENST00000341060 H3BUI4 141 aa13□□□□□ -0.33
TDP2-201ENST00000341060 ETV2O00321 342 aaPredicted RBP13□□□□□ -0.33
TDP2-201ENST00000341060 RP2O75695 350 aa13□□□□□ -0.33
TDP2-201ENST00000341060 PMS2P2O95744 297 aa13□□□□□ -0.33
TDP2-201ENST00000341060 CYB5AP00167 134 aa13□□□□□ -0.33
TDP2-201ENST00000341060 ZNF250P15622 560 aa13□□□□□ -0.33
TDP2-201ENST00000341060 PMPCAQ10713 525 aa13□□□□□ -0.33
TDP2-201ENST00000341060 HLXQ14774 488 aaPredicted RBP13□□□□□ -0.33
TDP2-201ENST00000341060 IDO2Q6ZQW0 420 aa13□□□□□ -0.33
TDP2-201ENST00000341060 GALNT16Q8N428 558 aa13□□□□□ -0.33
TDP2-201ENST00000341060 LRRC20Q8TCA0 184 aa13□□□□□ -0.33
TDP2-201ENST00000341060 THAP3Q8WTV1 239 aaPredicted RBP13□□□□□ -0.33
TDP2-201ENST00000341060 RNF138Q8WVD3 245 aa13□□□□□ -0.33
TDP2-201ENST00000341060 FOXRED1Q96CU9 486 aaPredicted RBP13□□□□□ -0.33
TDP2-201ENST00000341060 SLC7A5P2Q9GIP4 190 aa13□□□□□ -0.33
TDP2-201ENST00000341060 DUSP15Q9H1R2 295 aaPredicted RBP13□□□□□ -0.33
TDP2-201ENST00000341060 MED11Q9P086 117 aa13□□□□□ -0.33
TDP2-201ENST00000341060 MRPS17Q9Y2R5 130 aaKnown RBP13□□□□□ -0.33
TDP2-201ENST00000341060 TMEM82A0PJX8 343 aa12.99□□□□□ -0.33
TDP2-201ENST00000341060 VSTM2BA6NLU5 285 aa12.99□□□□□ -0.33
TDP2-201ENST00000341060 BCAT2O15382 392 aaPredicted RBP12.99□□□□□ -0.33
TDP2-201ENST00000341060 LMX1BO60663 402 aa12.99□□□□□ -0.33
TDP2-201ENST00000341060 CD74P04233 296 aa12.99□□□□□ -0.33
TDP2-201ENST00000341060 H2BFMP0C1H6 154 aa12.99□□□□□ -0.33
TDP2-201ENST00000341060 OR4E1P0C645 316 aa12.99□□□□□ -0.33
TDP2-201ENST00000341060 FOXF1Q12946 379 aa12.99□□□□□ -0.33
TDP2-201ENST00000341060 SQSTM1Q13501 440 aa12.99□□□□□ -0.33
TDP2-201ENST00000341060 MOGAT2Q3SYC2 334 aa12.99□□□□□ -0.33
TDP2-201ENST00000341060 B3GNTL1Q67FW5 361 aaPredicted RBP12.99□□□□□ -0.33
TDP2-201ENST00000341060 C11orf88Q6PI97 169 aa12.99□□□□□ -0.33
TDP2-201ENST00000341060 CHMP1BQ7LBR1 199 aa12.99□□□□□ -0.33
TDP2-201ENST00000341060 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.99□□□□□ -0.33
TDP2-201ENST00000341060 OR4D6Q8NGJ1 314 aa12.99□□□□□ -0.33
TDP2-201ENST00000341060 DNASE2BQ8WZ79 361 aa12.99□□□□□ -0.33
TDP2-201ENST00000341060 GAL3ST1Q99999 423 aa12.99□□□□□ -0.33
TDP2-201ENST00000341060 WNT16Q9UBV4 365 aa12.99□□□□□ -0.33
TDP2-201ENST00000341060 B3GALT5Q9Y2C3 310 aa12.99□□□□□ -0.33
TDP2-201ENST00000341060 FXYD6-FXYD2A0A087WZ82 144 aa12.98□□□□□ -0.33
TDP2-201ENST00000341060 LOC101059948A0A1B0GTJ6 334 aa12.98□□□□□ -0.33
TDP2-201ENST00000341060 A0A1W2PNV4 684 aa12.98□□□□□ -0.33
TDP2-201ENST00000341060 LIPT2A6NK58 231 aa12.98□□□□□ -0.33
TDP2-201ENST00000341060 TOX3O15405 576 aaPredicted RBP12.98□□□□□ -0.33
TDP2-201ENST00000341060 AMY2AP04746 511 aa12.98□□□□□ -0.33
TDP2-201ENST00000341060 RAB6AP20340 208 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms