RNA–Protein interactions for RNA: ENST00000340882.2

NECTIN1-202, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene NECTIN1, Length 1,059 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-202ENST00000340882 ITPKCQ96DU7 683 aa13.53□□□□□ -0.24
NECTIN1-202ENST00000340882 SEMA6AQ9H2E6 1030 aa13.53□□□□□ -0.24
NECTIN1-202ENST00000340882 SMURF2Q9HAU4 748 aa13.53□□□□□ -0.24
NECTIN1-202ENST00000340882 INIPQ9NRY2 104 aa13.53□□□□□ -0.24
NECTIN1-202ENST00000340882 TBCCD1Q9NVR7 557 aa13.53□□□□□ -0.24
NECTIN1-202ENST00000340882 SLC13A4Q9UKG4 626 aa13.53□□□□□ -0.24
NECTIN1-202ENST00000340882 ANGPT4Q9Y264 503 aa13.53□□□□□ -0.24
NECTIN1-202ENST00000340882 PRORSD1PA6NEY8 169 aa13.52□□□□□ -0.25
NECTIN1-202ENST00000340882 F5H5P2 479 aa13.52□□□□□ -0.25
NECTIN1-202ENST00000340882 IFNL4K9M1U5 179 aa13.52□□□□□ -0.25
NECTIN1-202ENST00000340882 KITP10721 976 aa13.52□□□□□ -0.25
NECTIN1-202ENST00000340882 PSMB10P40306 273 aa13.52□□□□□ -0.25
NECTIN1-202ENST00000340882 GDPGP1Q6ZNW5 385 aa13.52□□□□□ -0.25
NECTIN1-202ENST00000340882 FOXL2NBQ6ZUU3 175 aa13.52□□□□□ -0.25
NECTIN1-202ENST00000340882 GOLGA6L1Q8N7Z2 621 aa13.52□□□□□ -0.25
NECTIN1-202ENST00000340882 C11orf44Q8N8P7 122 aa13.52□□□□□ -0.25
NECTIN1-202ENST00000340882 PFN4Q8NHR9 129 aa13.52□□□□□ -0.25
NECTIN1-202ENST00000340882 ANP32BQ92688 251 aaKnown RBP13.52□□□□□ -0.25
NECTIN1-202ENST00000340882 WDFY2Q96P53 400 aa13.52□□□□□ -0.25
NECTIN1-202ENST00000340882 TRIM15Q9C019 465 aa13.52□□□□□ -0.25
NECTIN1-202ENST00000340882 SIRPDQ9H106 197 aa13.52□□□□□ -0.25
NECTIN1-202ENST00000340882 TOR3AQ9H497 397 aa13.52□□□□□ -0.25
NECTIN1-202ENST00000340882 VAPAQ9P0L0 249 aa13.52□□□□□ -0.25
NECTIN1-202ENST00000340882 SIGLEC9Q9Y336 463 aa13.52□□□□□ -0.25
NECTIN1-202ENST00000340882 GPR37O15354 613 aa13.51□□□□□ -0.25
NECTIN1-202ENST00000340882 HDAC3O15379 428 aa13.51□□□□□ -0.25
NECTIN1-202ENST00000340882 FCN3O75636 299 aa13.51□□□□□ -0.25
NECTIN1-202ENST00000340882 FUT1P19526 365 aa13.51□□□□□ -0.25
NECTIN1-202ENST00000340882 FUT4P22083 530 aa13.51□□□□□ -0.25
NECTIN1-202ENST00000340882 DAP3P51398 398 aaKnown RBP13.51□□□□□ -0.25
NECTIN1-202ENST00000340882 LAPTM4AQ15012 233 aa13.51□□□□□ -0.25
NECTIN1-202ENST00000340882 LRIF1Q5T3J3 769 aa13.51□□□□□ -0.25
NECTIN1-202ENST00000340882 DHRS7BQ6IAN0 325 aaPredicted RBP13.51□□□□□ -0.25
NECTIN1-202ENST00000340882 OR2T2Q6IF00 324 aa13.51□□□□□ -0.25
NECTIN1-202ENST00000340882 C1orf94Q6P1W5 598 aa13.51□□□□□ -0.25
NECTIN1-202ENST00000340882 ARL9Q6T311 187 aa13.51□□□□□ -0.25
NECTIN1-202ENST00000340882 DCDC5Q6ZRR9 648 aa13.51□□□□□ -0.25
NECTIN1-202ENST00000340882 MAVSQ7Z434 540 aa13.51□□□□□ -0.25
NECTIN1-202ENST00000340882 PTP4A1Q93096 173 aa13.51□□□□□ -0.25
NECTIN1-202ENST00000340882 MAELQ96JY0 434 aaKnown RBP13.51□□□□□ -0.25
NECTIN1-202ENST00000340882 OR52B2Q96RD2 323 aa13.51□□□□□ -0.25
NECTIN1-202ENST00000340882 EMC7Q9NPA0 242 aa13.51□□□□□ -0.25
NECTIN1-202ENST00000340882 C20orf141Q9NUB4 165 aa13.51□□□□□ -0.25
NECTIN1-202ENST00000340882 TMCC3Q9ULS5 477 aa13.51□□□□□ -0.25
NECTIN1-202ENST00000340882 TRAPPC13A5PLN9 417 aa13.5□□□□□ -0.25
NECTIN1-202ENST00000340882 SERPINB7O75635 380 aa13.5□□□□□ -0.25
NECTIN1-202ENST00000340882 FSTL3O95633 263 aa13.5□□□□□ -0.25
NECTIN1-202ENST00000340882 TSPAN19P0C672 248 aa13.5□□□□□ -0.25
NECTIN1-202ENST00000340882 SLC6A2P23975 617 aa13.5□□□□□ -0.25
NECTIN1-202ENST00000340882 GUCY1A3Q02108 690 aa13.5□□□□□ -0.25
NECTIN1-202ENST00000340882 IFFO1Q0D2I5 559 aa13.5□□□□□ -0.25
NECTIN1-202ENST00000340882 COX10Q12887 443 aa13.5□□□□□ -0.25
NECTIN1-202ENST00000340882 HERPUD1Q15011 391 aa13.5□□□□□ -0.25
NECTIN1-202ENST00000340882 ZNF181Q2M3W8 571 aa13.5□□□□□ -0.25
NECTIN1-202ENST00000340882 PAGE3Q5JUK9 113 aa13.5□□□□□ -0.25
NECTIN1-202ENST00000340882 OTPQ5XKR4 325 aa13.5□□□□□ -0.25
NECTIN1-202ENST00000340882 SLC35E4Q6ICL7 350 aa13.5□□□□□ -0.25
NECTIN1-202ENST00000340882 KIRREL3Q8IZU9 778 aa13.5□□□□□ -0.25
NECTIN1-202ENST00000340882 TECTBQ96PL2 329 aa13.5□□□□□ -0.25
NECTIN1-202ENST00000340882 ROPN1BQ9BZX4 212 aaPredicted RBP13.5□□□□□ -0.25
NECTIN1-202ENST00000340882 RASSF4Q9H2L5 321 aa13.5□□□□□ -0.25
NECTIN1-202ENST00000340882 TMEM38AQ9H6F2 299 aa13.5□□□□□ -0.25
NECTIN1-202ENST00000340882 ROPN1Q9HAT0 212 aaPredicted RBP13.5□□□□□ -0.25
NECTIN1-202ENST00000340882 SMURF1Q9HCE7 757 aa13.5□□□□□ -0.25
NECTIN1-202ENST00000340882 NDRG4Q9ULP0 352 aaKnown RBP13.5□□□□□ -0.25
NECTIN1-202ENST00000340882 FOXJ3Q9UPW0 622 aa13.5□□□□□ -0.25
NECTIN1-202ENST00000340882 TRBV5-3A0A0A0MS03 114 aa13.49□□□□□ -0.25
NECTIN1-202ENST00000340882 A0A1W2PPL8 197 aa13.49□□□□□ -0.25
NECTIN1-202ENST00000340882 OR7A10O76100 309 aa13.49□□□□□ -0.25
NECTIN1-202ENST00000340882 HTR5AP47898 357 aa13.49□□□□□ -0.25
NECTIN1-202ENST00000340882 PCBD1P61457 104 aa13.49□□□□□ -0.25
NECTIN1-202ENST00000340882 TOP3AQ13472 1001 aaPredicted RBP13.49□□□□□ -0.25
NECTIN1-202ENST00000340882 CCBE1Q6UXH8 406 aaPredicted RBP13.49□□□□□ -0.25
NECTIN1-202ENST00000340882 HDDC2Q7Z4H3 204 aa13.49□□□□□ -0.25
NECTIN1-202ENST00000340882 PTOV1Q86YD1 416 aa13.49□□□□□ -0.25
NECTIN1-202ENST00000340882 NKAIN4Q8IVV8 208 aa13.49□□□□□ -0.25
NECTIN1-202ENST00000340882 LYG1Q8N1E2 194 aa13.49□□□□□ -0.25
NECTIN1-202ENST00000340882 SCCPDHQ8NBX0 429 aa13.49□□□□□ -0.25
NECTIN1-202ENST00000340882 OR8G5Q8NG78 346 aa13.49□□□□□ -0.25
NECTIN1-202ENST00000340882 PPP1R14AQ96A00 147 aa13.49□□□□□ -0.25
NECTIN1-202ENST00000340882 MAGEB18Q96M61 343 aa13.49□□□□□ -0.25
NECTIN1-202ENST00000340882 EVA1AQ9H8M9 152 aa13.49□□□□□ -0.25
NECTIN1-202ENST00000340882 NECAP2Q9NVZ3 263 aa13.49□□□□□ -0.25
NECTIN1-202ENST00000340882 PTTG3PQ9NZH4 202 aa13.49□□□□□ -0.25
NECTIN1-202ENST00000340882 KIF17Q9P2E2 1029 aa13.49□□□□□ -0.25
NECTIN1-202ENST00000340882 EPPK1P58107 5090 aaKnown RBP13.48□□□□□ -0.25
NECTIN1-202ENST00000340882 LOC100653049A0A140TA62 436 aa13.48□□□□□ -0.25
NECTIN1-202ENST00000340882 TRPC5OSA6NMA1 111 aa13.48□□□□□ -0.25
NECTIN1-202ENST00000340882 M0QX08 132 aa13.48□□□□□ -0.25
NECTIN1-202ENST00000340882 DOK2O60496 412 aa13.48□□□□□ -0.25
NECTIN1-202ENST00000340882 KRT34O76011 436 aa13.48□□□□□ -0.25
NECTIN1-202ENST00000340882 MT-ND1P03886 318 aa13.48□□□□□ -0.25
NECTIN1-202ENST00000340882 HLA-DPB1P04440 258 aa13.48□□□□□ -0.25
NECTIN1-202ENST00000340882 COX5BP10606 129 aa13.48□□□□□ -0.25
NECTIN1-202ENST00000340882 RAC2P15153 192 aa13.48□□□□□ -0.25
NECTIN1-202ENST00000340882 GPX2P18283 190 aa13.48□□□□□ -0.25
NECTIN1-202ENST00000340882 MSR1P21757 451 aa13.48□□□□□ -0.25
NECTIN1-202ENST00000340882 TUBG1P23258 451 aa13.48□□□□□ -0.25
NECTIN1-202ENST00000340882 SRP9P49458 86 aaKnown RBP13.48□□□□□ -0.25
NECTIN1-202ENST00000340882 PRSS12P56730 875 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms