RNA–Protein interactions for RNA: ENST00000340541.4

VAPA-201, Transcript of VAMP associated protein A, humanhuman

TSL 5 BASIC

Gene VAPA, Length 1,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-201ENST00000340541 OR1J1Q8NGS3 322 aa13.18□□□□□ -0.3
VAPA-201ENST00000340541 MARS2Q96GW9 593 aaKnown RBP13.18□□□□□ -0.3
VAPA-201ENST00000340541 RBM4Q9BWF3 364 aaKnown RBP13.18□□□□□ -0.3
VAPA-201ENST00000340541 NMNAT2Q9BZQ4 307 aa13.18□□□□□ -0.3
VAPA-201ENST00000340541 RAB1BQ9H0U4 201 aa13.18□□□□□ -0.3
VAPA-201ENST00000340541 YY1AP1Q9H869 796 aa13.18□□□□□ -0.3
VAPA-201ENST00000340541 DYNLRB1Q9NP97 96 aa13.18□□□□□ -0.3
VAPA-201ENST00000340541 MRPL22Q9NWU5 206 aaKnown RBP13.18□□□□□ -0.3
VAPA-201ENST00000340541 DUSP13Q9UII6 198 aa13.18□□□□□ -0.3
VAPA-201ENST00000340541 NDRG4Q9ULP0 352 aaKnown RBP13.18□□□□□ -0.3
VAPA-201ENST00000340541 BAIAP2Q9UQB8 552 aa13.18□□□□□ -0.3
VAPA-201ENST00000340541 RNF212BA8MTL3 300 aa13.17□□□□□ -0.3
VAPA-201ENST00000340541 VWC2LB2RUY7 222 aa13.17□□□□□ -0.3
VAPA-201ENST00000340541 E2F6O75461 281 aa13.17□□□□□ -0.3
VAPA-201ENST00000340541 TIPRLO75663 272 aa13.17□□□□□ -0.3
VAPA-201ENST00000340541 FAM157CP0CG43 387 aa13.17□□□□□ -0.3
VAPA-201ENST00000340541 PRKACGP22612 351 aa13.17□□□□□ -0.3
VAPA-201ENST00000340541 THBS2P35442 1172 aa13.17□□□□□ -0.3
VAPA-201ENST00000340541 GGT2P36268 569 aa13.17□□□□□ -0.3
VAPA-201ENST00000340541 HTR5AP47898 357 aa13.17□□□□□ -0.3
VAPA-201ENST00000340541 CENPAP49450 140 aa13.17□□□□□ -0.3
VAPA-201ENST00000340541 GLO1Q04760 184 aa13.17□□□□□ -0.3
VAPA-201ENST00000340541 CRMP1Q14194 572 aa13.17□□□□□ -0.3
VAPA-201ENST00000340541 TMEM249Q2WGJ8 235 aa13.17□□□□□ -0.3
VAPA-201ENST00000340541 C6orf52Q5T4I8 152 aa13.17□□□□□ -0.3
VAPA-201ENST00000340541 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.17□□□□□ -0.3
VAPA-201ENST00000340541 SYNPRQ8TBG9 265 aa13.17□□□□□ -0.3
VAPA-201ENST00000340541 NEU4Q8WWR8 484 aaPredicted RBP13.17□□□□□ -0.3
VAPA-201ENST00000340541 SLC7A6Q92536 515 aa13.17□□□□□ -0.3
VAPA-201ENST00000340541 FAM168AQ92567 244 aa13.17□□□□□ -0.3
VAPA-201ENST00000340541 DUS3LQ96G46 650 aaKnown RBP13.17□□□□□ -0.3
VAPA-201ENST00000340541 C4orf45Q96LM5 186 aa13.17□□□□□ -0.3
VAPA-201ENST00000340541 REPIN1Q9BWE0 567 aaKnown RBP13.17□□□□□ -0.3
VAPA-201ENST00000340541 TPK1Q9H3S4 243 aa13.17□□□□□ -0.3
VAPA-201ENST00000340541 PLEK2Q9NYT0 353 aa13.17□□□□□ -0.3
VAPA-201ENST00000340541 LPAR3Q9UBY5 353 aa13.17□□□□□ -0.3
VAPA-201ENST00000340541 YLPM1P49750 1951 aaKnown RBP13.17□□□□□ -0.3
VAPA-201ENST00000340541 PYCR1P32322 319 aa13.16□□□□□ -0.3
VAPA-201ENST00000340541 MPV17P39210 176 aa13.16□□□□□ -0.3
VAPA-201ENST00000340541 KLF3P57682 345 aaPredicted RBP13.16□□□□□ -0.3
VAPA-201ENST00000340541 TEKQ02763 1124 aa13.16□□□□□ -0.3
VAPA-201ENST00000340541 SPATA46Q5T0L3 261 aa13.16□□□□□ -0.3
VAPA-201ENST00000340541 C1orf146Q5VVC0 180 aa13.16□□□□□ -0.3
VAPA-201ENST00000340541 SLC18B1Q6NT16 456 aa13.16□□□□□ -0.3
VAPA-201ENST00000340541 SHQ1Q6PI26 577 aaKnown RBP13.16□□□□□ -0.3
VAPA-201ENST00000340541 CORO6Q6QEF8 472 aa13.16□□□□□ -0.3
VAPA-201ENST00000340541 IQCF1Q8N6M8 205 aa13.16□□□□□ -0.3
VAPA-201ENST00000340541 ICA1LQ8NDH6 482 aa13.16□□□□□ -0.3
VAPA-201ENST00000340541 OR9Q1Q8NGQ5 310 aa13.16□□□□□ -0.3
VAPA-201ENST00000340541 OR1F12Q8NHA8 337 aa13.16□□□□□ -0.3
VAPA-201ENST00000340541 ABHD4Q8TB40 342 aa13.16□□□□□ -0.3
VAPA-201ENST00000340541 SLC25A40Q8TBP6 338 aa13.16□□□□□ -0.3
VAPA-201ENST00000340541 OR2J1Q9GZK6 312 aa13.16□□□□□ -0.3
VAPA-201ENST00000340541 MS4A5Q9H3V2 200 aa13.16□□□□□ -0.3
VAPA-201ENST00000340541 MYOZ1Q9NP98 299 aaPredicted RBP13.16□□□□□ -0.3
VAPA-201ENST00000340541 TAAR3PQ9P1P4 343 aa13.16□□□□□ -0.3
VAPA-201ENST00000340541 EIF3KQ9UBQ5 218 aaKnown RBP13.16□□□□□ -0.3
VAPA-201ENST00000340541 CYB5R1Q9UHQ9 305 aa13.16□□□□□ -0.3
VAPA-201ENST00000340541 ATPIF1Q9UII2 106 aa13.16□□□□□ -0.3
VAPA-201ENST00000340541 KLHL21Q9UJP4 597 aa13.16□□□□□ -0.3
VAPA-201ENST00000340541 A0A1W2PPW3 197 aa13.15□□□□□ -0.3
VAPA-201ENST00000340541 DEAF1O75398 565 aaPredicted RBP13.15□□□□□ -0.3
VAPA-201ENST00000340541 IGHV3-13P01766 116 aa13.15□□□□□ -0.3
VAPA-201ENST00000340541 DBHP09172 617 aa13.15□□□□□ -0.3
VAPA-201ENST00000340541 NAT2P11245 290 aa13.15□□□□□ -0.3
VAPA-201ENST00000340541 PSKH1P11801 424 aa13.15□□□□□ -0.3
VAPA-201ENST00000340541 ANXA8P13928 327 aa13.15□□□□□ -0.3
VAPA-201ENST00000340541 DAOP14920 347 aa13.15□□□□□ -0.3
VAPA-201ENST00000340541 PDLIM4P50479 330 aa13.15□□□□□ -0.3
VAPA-201ENST00000340541 SLC25A1P53007 311 aa13.15□□□□□ -0.3
VAPA-201ENST00000340541 PPP1CBP62140 327 aa13.15□□□□□ -0.3
VAPA-201ENST00000340541 ATP6AP1Q15904 470 aa13.15□□□□□ -0.3
VAPA-201ENST00000340541 RSPO1Q2MKA7 263 aaPredicted RBP13.15□□□□□ -0.3
VAPA-201ENST00000340541 ALKBH6Q3KRA9 238 aa13.15□□□□□ -0.3
VAPA-201ENST00000340541 KRTAP27-1Q3LI81 207 aa13.15□□□□□ -0.3
VAPA-201ENST00000340541 MBNL2Q5VZF2 373 aaKnown RBP13.15□□□□□ -0.3
VAPA-201ENST00000340541 CYB5R2Q6BCY4 276 aa13.15□□□□□ -0.3
VAPA-201ENST00000340541 LYPD4Q6UWN0 246 aa13.15□□□□□ -0.3
VAPA-201ENST00000340541 CFAP77Q6ZQR2 320 aa13.15□□□□□ -0.3
VAPA-201ENST00000340541 LINC00346Q8IVM7 164 aa13.15□□□□□ -0.3
VAPA-201ENST00000340541 GJC3Q8NFK1 279 aa13.15□□□□□ -0.3
VAPA-201ENST00000340541 OR2T4Q8NH00 348 aa13.15□□□□□ -0.3
VAPA-201ENST00000340541 TEX47Q8TBZ9 253 aa13.15□□□□□ -0.3
VAPA-201ENST00000340541 KLF14Q8TD94 323 aaPredicted RBP13.15□□□□□ -0.3
VAPA-201ENST00000340541 IPCEF1Q8WWN9 437 aaPredicted RBP13.15□□□□□ -0.3
VAPA-201ENST00000340541 NRBF2Q96F24 287 aa13.15□□□□□ -0.3
VAPA-201ENST00000340541 POFUT1Q9H488 388 aa13.15□□□□□ -0.3
VAPA-201ENST00000340541 PNRC2Q9NPJ4 139 aaKnown RBP13.15□□□□□ -0.3
VAPA-201ENST00000340541 CMC2Q9NRP2 79 aa13.15□□□□□ -0.3
VAPA-201ENST00000340541 TBCCD1Q9NVR7 557 aa13.15□□□□□ -0.3
VAPA-201ENST00000340541 POLR1DQ9Y2S0 133 aa13.15□□□□□ -0.3
VAPA-201ENST00000340541 LOC390937A0A1W2PQ73 354 aa13.14□□□□□ -0.31
VAPA-201ENST00000340541 H3BN98 237 aa13.14□□□□□ -0.31
VAPA-201ENST00000340541 NDUFS8O00217 210 aa13.14□□□□□ -0.31
VAPA-201ENST00000340541 NCR1O76036 304 aa13.14□□□□□ -0.31
VAPA-201ENST00000340541 ABHD16AO95870 558 aa13.14□□□□□ -0.31
VAPA-201ENST00000340541 GYPBP06028 91 aa13.14□□□□□ -0.31
VAPA-201ENST00000340541 CLUP10909 449 aa13.14□□□□□ -0.31
VAPA-201ENST00000340541 OSMP13725 252 aa13.14□□□□□ -0.31
VAPA-201ENST00000340541 GRK5P34947 590 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms