RNA–Protein interactions for RNA: ENST00000340417.7

LIN54-201, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN54, Length 6,127 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-201ENST00000340417 RNF212BA8MTL3 300 aa11.5□□□□□ -0.57
LIN54-201ENST00000340417 NCR1O76036 304 aa11.5□□□□□ -0.57
LIN54-201ENST00000340417 F2RL1P55085 397 aa11.5□□□□□ -0.57
LIN54-201ENST00000340417 Q499Y3 187 aa11.5□□□□□ -0.57
LIN54-201ENST00000340417 PPP1R32Q7Z5V6 425 aa11.5□□□□□ -0.57
LIN54-201ENST00000340417 TMEM52Q8NDY8 209 aa11.5□□□□□ -0.57
LIN54-201ENST00000340417 OR13G1Q8NGZ3 307 aa11.5□□□□□ -0.57
LIN54-201ENST00000340417 ABHD3Q8WU67 409 aa11.5□□□□□ -0.57
LIN54-201ENST00000340417 CMC2Q9NRP2 79 aa11.5□□□□□ -0.57
LIN54-201ENST00000340417 A0A0B4J2E0 115 aa11.5□□□□□ -0.57
LIN54-201ENST00000340417 A0A1B0GX12 115 aa11.5□□□□□ -0.57
LIN54-201ENST00000340417 ZNF17P17021 662 aa11.5□□□□□ -0.57
LIN54-201ENST00000340417 CTSSP25774 331 aa11.5□□□□□ -0.57
LIN54-201ENST00000340417 SMIM21Q3B7S5 101 aa11.5□□□□□ -0.57
LIN54-201ENST00000340417 ZNF691Q5VV52 312 aa11.5□□□□□ -0.57
LIN54-201ENST00000340417 LHFPL2Q6ZUX7 228 aa11.5□□□□□ -0.57
LIN54-201ENST00000340417 NKX3-1Q99801 234 aaPredicted RBP11.5□□□□□ -0.57
LIN54-201ENST00000340417 ARHGDIGQ99819 225 aa11.5□□□□□ -0.57
LIN54-201ENST00000340417 ACHEP22303 614 aa11.49□□□□□ -0.57
LIN54-201ENST00000340417 APEX1P27695 318 aaKnown RBP11.49□□□□□ -0.57
LIN54-201ENST00000340417 GALEQ14376 348 aa11.49□□□□□ -0.57
LIN54-201ENST00000340417 OTPQ5XKR4 325 aa11.49□□□□□ -0.57
LIN54-201ENST00000340417 SF3B5Q9BWJ5 86 aaKnown RBP11.49□□□□□ -0.57
LIN54-201ENST00000340417 GPR84Q9NQS5 396 aa11.49□□□□□ -0.57
LIN54-201ENST00000340417 A0A1B0GVC2 190 aa11.49□□□□□ -0.57
LIN54-201ENST00000340417 PAX7P23759 505 aa11.49□□□□□ -0.57
LIN54-201ENST00000340417 HTR2CP28335 458 aa11.49□□□□□ -0.57
LIN54-201ENST00000340417 PSG6Q00889 435 aa11.49□□□□□ -0.57
LIN54-201ENST00000340417 TOMM34Q15785 309 aaPredicted RBP11.49□□□□□ -0.57
LIN54-201ENST00000340417 PABPC1L2AQ5JQF8 200 aa11.49□□□□□ -0.57
LIN54-201ENST00000340417 FAM198BQ6UWH4 519 aa11.49□□□□□ -0.57
LIN54-201ENST00000340417 COQ8AQ8NI60 647 aa11.49□□□□□ -0.57
LIN54-201ENST00000340417 TEAD3Q99594 435 aa11.49□□□□□ -0.57
LIN54-201ENST00000340417 TUSC2O75896 110 aa11.49□□□□□ -0.57
LIN54-201ENST00000340417 BCDIN3DQ7Z5W3 292 aaKnown RBP11.49□□□□□ -0.57
LIN54-201ENST00000340417 CXorf67Q86X51 503 aaPredicted RBP11.49□□□□□ -0.57
LIN54-201ENST00000340417 OR51A2Q8NGJ7 313 aa11.49□□□□□ -0.57
LIN54-201ENST00000340417 TMEM68Q96MH6 324 aa11.49□□□□□ -0.57
LIN54-201ENST00000340417 SIAEQ9HAT2 523 aa11.49□□□□□ -0.57
LIN54-201ENST00000340417 TRAPPC4Q9Y296 219 aa11.49□□□□□ -0.57
LIN54-201ENST00000340417 OR2AT4A6NND4 320 aa11.49□□□□□ -0.57
LIN54-201ENST00000340417 H3BSA7 217 aa11.49□□□□□ -0.57
LIN54-201ENST00000340417 PCMT1P22061 227 aa11.49□□□□□ -0.57
LIN54-201ENST00000340417 CFHR1Q03591 330 aa11.49□□□□□ -0.57
LIN54-201ENST00000340417 CHDHQ8NE62 594 aaPredicted RBP11.49□□□□□ -0.57
LIN54-201ENST00000340417 C17orf47Q8NEP4 570 aa11.49□□□□□ -0.57
LIN54-201ENST00000340417 PRSS33Q8NF86 280 aa11.49□□□□□ -0.57
LIN54-201ENST00000340417 OPN3Q9H1Y3 402 aaPredicted RBP11.49□□□□□ -0.57
LIN54-201ENST00000340417 B9D1Q9UPM9 204 aa11.49□□□□□ -0.57
LIN54-201ENST00000340417 CPT2P23786 658 aa11.49□□□□□ -0.57
LIN54-201ENST00000340417 PPP1CBP62140 327 aa11.49□□□□□ -0.57
LIN54-201ENST00000340417 RPP30P78346 268 aaKnown RBP11.49□□□□□ -0.57
LIN54-201ENST00000340417 GGHQ92820 318 aa11.49□□□□□ -0.57
LIN54-201ENST00000340417 GHSRQ92847 366 aa11.49□□□□□ -0.57
LIN54-201ENST00000340417 MSRB2Q9Y3D2 182 aa11.49□□□□□ -0.57
LIN54-201ENST00000340417 NEUROG3Q9Y4Z2 214 aa11.49□□□□□ -0.57
LIN54-201ENST00000340417 APOA2P02652 100 aa11.48□□□□□ -0.57
LIN54-201ENST00000340417 LTBQ06643 244 aa11.48□□□□□ -0.57
LIN54-201ENST00000340417 MICBQ29980 383 aa11.48□□□□□ -0.57
LIN54-201ENST00000340417 PTOV1Q86YD1 416 aa11.48□□□□□ -0.57
LIN54-201ENST00000340417 LGALS12Q96DT0 336 aa11.48□□□□□ -0.57
LIN54-201ENST00000340417 MPGP29372 298 aa11.48□□□□□ -0.57
LIN54-201ENST00000340417 RTP5Q14D33 572 aa11.48□□□□□ -0.57
LIN54-201ENST00000340417 KIAA0040Q15053 153 aa11.48□□□□□ -0.57
LIN54-201ENST00000340417 PCGF3Q3KNV8 242 aa11.48□□□□□ -0.57
LIN54-201ENST00000340417 ADPRMQ3LIE5 342 aa11.48□□□□□ -0.57
LIN54-201ENST00000340417 OR2T2Q6IF00 324 aa11.48□□□□□ -0.57
LIN54-201ENST00000340417 SPNS3Q6ZMD2 512 aa11.48□□□□□ -0.57
LIN54-201ENST00000340417 NPEPL1Q8NDH3 523 aa11.48□□□□□ -0.57
LIN54-201ENST00000340417 MCHR2Q969V1 340 aa11.48□□□□□ -0.57
LIN54-201ENST00000340417 S100PBPQ96BU1 408 aa11.48□□□□□ -0.57
LIN54-201ENST00000340417 RAB3CQ96E17 227 aa11.48□□□□□ -0.57
LIN54-201ENST00000340417 LIPGQ9Y5X9 500 aa11.48□□□□□ -0.57
LIN54-201ENST00000340417 LOC107986453A0A1B0GWG9 222 aa11.48□□□□□ -0.57
LIN54-201ENST00000340417 LGALS8O00214 317 aa11.48□□□□□ -0.57
LIN54-201ENST00000340417 SLC16A6O15403 523 aa11.48□□□□□ -0.57
LIN54-201ENST00000340417 INPP5JQ15735 1006 aaPredicted RBP11.48□□□□□ -0.57
LIN54-201ENST00000340417 RAB12Q6IQ22 244 aa11.48□□□□□ -0.57
LIN54-201ENST00000340417 ZNF574Q6ZN55 896 aaPredicted RBP11.48□□□□□ -0.57
LIN54-201ENST00000340417 NUFIP2Q7Z417 695 aaKnown RBP11.48□□□□□ -0.57
LIN54-201ENST00000340417 TNFRSF19Q9NS68 423 aa11.48□□□□□ -0.57
LIN54-201ENST00000340417 RABL2AQ9UBK7 228 aaPredicted RBP11.48□□□□□ -0.57
LIN54-201ENST00000340417 RABL2BQ9UNT1 228 aa11.48□□□□□ -0.57
LIN54-201ENST00000340417 PRELID3BQ9Y3B1 194 aa11.48□□□□□ -0.57
LIN54-201ENST00000340417 ZC3H12DA2A288 527 aaKnown RBP11.48□□□□□ -0.57
LIN54-201ENST00000340417 MEIS3P1A6NDR6 274 aa11.48□□□□□ -0.57
LIN54-201ENST00000340417 MRPS14O60783 128 aaKnown RBP11.48□□□□□ -0.57
LIN54-201ENST00000340417 PET100P0DJ07 73 aa11.48□□□□□ -0.57
LIN54-201ENST00000340417 ZNF32P17041 273 aa11.48□□□□□ -0.57
LIN54-201ENST00000340417 PHC1P78364 1004 aa11.48□□□□□ -0.57
LIN54-201ENST00000340417 PCOLCEQ15113 449 aa11.48□□□□□ -0.57
LIN54-201ENST00000340417 CD226Q15762 336 aa11.48□□□□□ -0.57
LIN54-201ENST00000340417 CLVS2Q5SYC1 327 aa11.48□□□□□ -0.57
LIN54-201ENST00000340417 AADACL3Q5VUY0 350 aa11.48□□□□□ -0.57
LIN54-201ENST00000340417 HAGHLQ6PII5 290 aaPredicted RBP11.48□□□□□ -0.57
LIN54-201ENST00000340417 COMTD1Q86VU5 262 aa11.48□□□□□ -0.57
LIN54-201ENST00000340417 SGPP2Q8IWX5 399 aa11.48□□□□□ -0.57
LIN54-201ENST00000340417 OR1S1Q8NH92 325 aa11.48□□□□□ -0.57
LIN54-201ENST00000340417 OPALINQ96PE5 141 aa11.48□□□□□ -0.57
LIN54-201ENST00000340417 KCNJ15Q99712 375 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms