RNA–Protein interactions for RNA: ENST00000339255.2

NIPAL3-202, Transcript of NIPA like domain containing 3, humanhuman

TSL 5 BASIC

Gene NIPAL3, Length 1,676 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-202ENST00000339255 A0A1W2PPZ6 126 aa12.72□□□□□ -0.37
NIPAL3-202ENST00000339255 RER1O15258 196 aa12.72□□□□□ -0.37
NIPAL3-202ENST00000339255 SGCEO43556 437 aa12.72□□□□□ -0.37
NIPAL3-202ENST00000339255 LYZL6O75951 148 aa12.72□□□□□ -0.37
NIPAL3-202ENST00000339255 INMTO95050 263 aa12.72□□□□□ -0.37
NIPAL3-202ENST00000339255 ABHD16AO95870 558 aa12.72□□□□□ -0.37
NIPAL3-202ENST00000339255 HSMCR30P0CW71 290 aa12.72□□□□□ -0.37
NIPAL3-202ENST00000339255 PSMB1P20618 241 aaKnown RBP12.72□□□□□ -0.37
NIPAL3-202ENST00000339255 CHRNB4P30926 498 aa12.72□□□□□ -0.37
NIPAL3-202ENST00000339255 GBX2P52951 348 aaPredicted RBP12.72□□□□□ -0.37
NIPAL3-202ENST00000339255 GRB2P62993 217 aaKnown RBP12.72□□□□□ -0.37
NIPAL3-202ENST00000339255 GABRA6Q16445 453 aa12.72□□□□□ -0.37
NIPAL3-202ENST00000339255 SLC25A35Q3KQZ1 300 aa12.72□□□□□ -0.37
NIPAL3-202ENST00000339255 TBRG1Q3YBR2 411 aa12.72□□□□□ -0.37
NIPAL3-202ENST00000339255 ELFN2Q5R3F8 820 aa12.72□□□□□ -0.37
NIPAL3-202ENST00000339255 SFRP5Q5T4F7 317 aa12.72□□□□□ -0.37
NIPAL3-202ENST00000339255 CXorf67Q86X51 503 aaPredicted RBP12.72□□□□□ -0.37
NIPAL3-202ENST00000339255 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.72□□□□□ -0.37
NIPAL3-202ENST00000339255 ALDH16A1Q8IZ83 802 aa12.72□□□□□ -0.37
NIPAL3-202ENST00000339255 PELI1Q96FA3 418 aa12.72□□□□□ -0.37
NIPAL3-202ENST00000339255 ATF6BQ99941 703 aa12.72□□□□□ -0.37
NIPAL3-202ENST00000339255 TTTY10Q9BZA0 68 aa12.72□□□□□ -0.37
NIPAL3-202ENST00000339255 OR2H1Q9GZK4 316 aa12.72□□□□□ -0.37
NIPAL3-202ENST00000339255 ISG20L2Q9H9L3 353 aaKnown RBP12.72□□□□□ -0.37
NIPAL3-202ENST00000339255 BATF3Q9NR55 127 aa12.72□□□□□ -0.37
NIPAL3-202ENST00000339255 ACOXLQ9NUZ1 547 aa12.72□□□□□ -0.37
NIPAL3-202ENST00000339255 PLEK2Q9NYT0 353 aa12.72□□□□□ -0.37
NIPAL3-202ENST00000339255 MRM2Q9UI43 246 aaKnown RBP12.72□□□□□ -0.37
NIPAL3-202ENST00000339255 LRP12Q9Y561 859 aa12.72□□□□□ -0.37
NIPAL3-202ENST00000339255 RTTNQ86VV8 2226 aa12.72□□□□□ -0.37
NIPAL3-202ENST00000339255 ARPC4-TTLL3A0A0A6YYG9 625 aa12.71□□□□□ -0.37
NIPAL3-202ENST00000339255 PRR32B1ATL7 298 aa12.71□□□□□ -0.37
NIPAL3-202ENST00000339255 RAD51DO75771 328 aa12.71□□□□□ -0.37
NIPAL3-202ENST00000339255 H2BFMP0C1H6 154 aa12.71□□□□□ -0.37
NIPAL3-202ENST00000339255 ZNF32P17041 273 aa12.71□□□□□ -0.37
NIPAL3-202ENST00000339255 PAX7P23759 505 aa12.71□□□□□ -0.37
NIPAL3-202ENST00000339255 CD79BP40259 229 aa12.71□□□□□ -0.37
NIPAL3-202ENST00000339255 TGM4P49221 684 aa12.71□□□□□ -0.37
NIPAL3-202ENST00000339255 GP2P55259 537 aaKnown RBP12.71□□□□□ -0.37
NIPAL3-202ENST00000339255 UBE2NP61088 152 aaKnown RBP12.71□□□□□ -0.37
NIPAL3-202ENST00000339255 RAB39AQ14964 217 aa12.71□□□□□ -0.37
NIPAL3-202ENST00000339255 TAF13Q15543 124 aa12.71□□□□□ -0.37
NIPAL3-202ENST00000339255 C4orf17Q53FE4 359 aa12.71□□□□□ -0.37
NIPAL3-202ENST00000339255 ARMCX4Q5H9R4 360 aa12.71□□□□□ -0.37
NIPAL3-202ENST00000339255 LIPNQ5VXI9 398 aa12.71□□□□□ -0.37
NIPAL3-202ENST00000339255 ZNF544Q6NX49 715 aa12.71□□□□□ -0.37
NIPAL3-202ENST00000339255 TMEM53Q6P2H8 277 aa12.71□□□□□ -0.37
NIPAL3-202ENST00000339255 ZNF474Q6S9Z5 364 aaPredicted RBP12.71□□□□□ -0.37
NIPAL3-202ENST00000339255 LRRN1Q6UXK5 716 aa12.71□□□□□ -0.37
NIPAL3-202ENST00000339255 GPR141Q7Z602 305 aa12.71□□□□□ -0.37
NIPAL3-202ENST00000339255 P2RY8Q86VZ1 359 aa12.71□□□□□ -0.37
NIPAL3-202ENST00000339255 KLBQ86Z14 1044 aa12.71□□□□□ -0.37
NIPAL3-202ENST00000339255 OR13F1Q8NGS4 319 aa12.71□□□□□ -0.37
NIPAL3-202ENST00000339255 ASB5Q8WWX0 329 aa12.71□□□□□ -0.37
NIPAL3-202ENST00000339255 ELOVL3Q9HB03 270 aa12.71□□□□□ -0.37
NIPAL3-202ENST00000339255 PNRC2Q9NPJ4 139 aaKnown RBP12.71□□□□□ -0.37
NIPAL3-202ENST00000339255 SLCO1C1Q9NYB5 712 aa12.71□□□□□ -0.37
NIPAL3-202ENST00000339255 SPTBN1Q01082 2364 aaKnown RBP12.7□□□□□ -0.38
NIPAL3-202ENST00000339255 DOK2O60496 412 aa12.7□□□□□ -0.38
NIPAL3-202ENST00000339255 APOC1P02654 83 aa12.7□□□□□ -0.38
NIPAL3-202ENST00000339255 MMP7P09237 267 aaPredicted RBP12.7□□□□□ -0.38
NIPAL3-202ENST00000339255 IL32P24001 234 aa12.7□□□□□ -0.38
NIPAL3-202ENST00000339255 GPR50Q13585 617 aa12.7□□□□□ -0.38
NIPAL3-202ENST00000339255 TPBGQ13641 420 aa12.7□□□□□ -0.38
NIPAL3-202ENST00000339255 ZNF829Q3KNS6 432 aaPredicted RBP12.7□□□□□ -0.38
NIPAL3-202ENST00000339255 HIKESHIQ53FT3 197 aa12.7□□□□□ -0.38
NIPAL3-202ENST00000339255 NCCRP1Q6ZVX7 275 aaPredicted RBP12.7□□□□□ -0.38
NIPAL3-202ENST00000339255 BHLHA15Q7RTS1 189 aaPredicted RBP12.7□□□□□ -0.38
NIPAL3-202ENST00000339255 SSX8Q7RTT4 187 aa12.7□□□□□ -0.38
NIPAL3-202ENST00000339255 LUZP2Q86TE4 346 aa12.7□□□□□ -0.38
NIPAL3-202ENST00000339255 FJX1Q86VR8 437 aa12.7□□□□□ -0.38
NIPAL3-202ENST00000339255 ZNF843Q8N446 348 aa12.7□□□□□ -0.38
NIPAL3-202ENST00000339255 RELL2Q8NC24 303 aaPredicted RBP12.7□□□□□ -0.38
NIPAL3-202ENST00000339255 OR10S1Q8NGN2 331 aa12.7□□□□□ -0.38
NIPAL3-202ENST00000339255 UFD1Q92890 307 aa12.7□□□□□ -0.38
NIPAL3-202ENST00000339255 CENPMQ9NSP4 180 aa12.7□□□□□ -0.38
NIPAL3-202ENST00000339255 ZNF224Q9NZL3 707 aa12.7□□□□□ -0.38
NIPAL3-202ENST00000339255 FBXL3Q9UKT7 428 aa12.7□□□□□ -0.38
NIPAL3-202ENST00000339255 CHD6Q8TD26 2715 aa12.7□□□□□ -0.38
NIPAL3-202ENST00000339255 OR6C6A6NF89 314 aa12.7□□□□□ -0.38
NIPAL3-202ENST00000339255 OR5H1A6NKK0 313 aa12.7□□□□□ -0.38
NIPAL3-202ENST00000339255 PSMD9O00233 223 aa12.7□□□□□ -0.38
NIPAL3-202ENST00000339255 SYNGR3O43761 229 aa12.7□□□□□ -0.38
NIPAL3-202ENST00000339255 HLA-HP01893 362 aa12.7□□□□□ -0.38
NIPAL3-202ENST00000339255 COX5BP10606 129 aa12.7□□□□□ -0.38
NIPAL3-202ENST00000339255 CPEP16870 476 aa12.7□□□□□ -0.38
NIPAL3-202ENST00000339255 HSD11B1P28845 292 aa12.7□□□□□ -0.38
NIPAL3-202ENST00000339255 PLP2Q04941 152 aa12.7□□□□□ -0.38
NIPAL3-202ENST00000339255 GSG1Q2KHT4 349 aa12.7□□□□□ -0.38
NIPAL3-202ENST00000339255 FDX2Q6P4F2 183 aa12.7□□□□□ -0.38
NIPAL3-202ENST00000339255 RPL22L1Q6P5R6 122 aaKnown RBP12.7□□□□□ -0.38
NIPAL3-202ENST00000339255 STAC2Q6ZMT1 411 aa12.7□□□□□ -0.38
NIPAL3-202ENST00000339255 STEAP2Q8NFT2 490 aa12.7□□□□□ -0.38
NIPAL3-202ENST00000339255 SPTSSAQ969W0 71 aa12.7□□□□□ -0.38
NIPAL3-202ENST00000339255 OPALINQ96PE5 141 aa12.7□□□□□ -0.38
NIPAL3-202ENST00000339255 COQ7Q99807 217 aa12.7□□□□□ -0.38
NIPAL3-202ENST00000339255 OR10A4Q9H209 315 aa12.7□□□□□ -0.38
NIPAL3-202ENST00000339255 RNF121Q9H920 327 aa12.7□□□□□ -0.38
NIPAL3-202ENST00000339255 SLC17A5Q9NRA2 495 aa12.7□□□□□ -0.38
NIPAL3-202ENST00000339255 SLC5A6Q9Y289 635 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 171.6 ms