RNA–Protein interactions for RNA: ENST00000338427.10

NUDCD3-201, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-201ENST00000338427 RPS6KA6Q9UK32 745 aa11.3□□□□□ -0.6
NUDCD3-201ENST00000338427 B9D1Q9UPM9 204 aa11.3□□□□□ -0.6
NUDCD3-201ENST00000338427 AURKCQ9UQB9 309 aa11.3□□□□□ -0.6
NUDCD3-201ENST00000338427 H0YL77 283 aa11.29□□□□□ -0.6
NUDCD3-201ENST00000338427 ICMTO60725 284 aa11.29□□□□□ -0.6
NUDCD3-201ENST00000338427 ZNF205O95201 554 aa11.29□□□□□ -0.6
NUDCD3-201ENST00000338427 SDHAP31040 664 aa11.29□□□□□ -0.6
NUDCD3-201ENST00000338427 FAM209AQ5JX71 171 aa11.29□□□□□ -0.6
NUDCD3-201ENST00000338427 OR1F12Q8NHA8 337 aa11.29□□□□□ -0.6
NUDCD3-201ENST00000338427 ITLN1Q8WWA0 313 aa11.29□□□□□ -0.6
NUDCD3-201ENST00000338427 C22orf15Q8WYQ4 148 aa11.29□□□□□ -0.6
NUDCD3-201ENST00000338427 HAVCR1Q96D42 359 aa11.29□□□□□ -0.6
NUDCD3-201ENST00000338427 PYURFQ96I23 114 aa11.29□□□□□ -0.6
NUDCD3-201ENST00000338427 ERMAPQ96PL5 475 aaPredicted RBP11.29□□□□□ -0.6
NUDCD3-201ENST00000338427 CDRT15Q96T59 188 aa11.29□□□□□ -0.6
NUDCD3-201ENST00000338427 GAL3ST1Q99999 423 aa11.29□□□□□ -0.6
NUDCD3-201ENST00000338427 EGLN1Q9GZT9 426 aa11.29□□□□□ -0.6
NUDCD3-201ENST00000338427 ANKRD19PQ9H560 264 aa11.29□□□□□ -0.6
NUDCD3-201ENST00000338427 WDR76Q9H967 626 aa11.29□□□□□ -0.6
NUDCD3-201ENST00000338427 MED4Q9NPJ6 270 aa11.29□□□□□ -0.6
NUDCD3-201ENST00000338427 TBCCD1Q9NVR7 557 aa11.29□□□□□ -0.6
NUDCD3-201ENST00000338427 VSX1Q9NZR4 365 aaPredicted RBP11.29□□□□□ -0.6
NUDCD3-201ENST00000338427 OPN4Q9UHM6 478 aa11.29□□□□□ -0.6
NUDCD3-201ENST00000338427 NDRG4Q9ULP0 352 aaKnown RBP11.29□□□□□ -0.6
NUDCD3-201ENST00000338427 TMEM5Q9Y2B1 443 aa11.29□□□□□ -0.6
NUDCD3-201ENST00000338427 OR6C6A6NF89 314 aa11.28□□□□□ -0.6
NUDCD3-201ENST00000338427 SNX3O60493 162 aa11.28□□□□□ -0.6
NUDCD3-201ENST00000338427 PNPP00491 289 aa11.28□□□□□ -0.6
NUDCD3-201ENST00000338427 SEMG1P04279 462 aa11.28□□□□□ -0.6
NUDCD3-201ENST00000338427 CD55P08174 381 aa11.28□□□□□ -0.6
NUDCD3-201ENST00000338427 ADH4P08319 380 aa11.28□□□□□ -0.6
NUDCD3-201ENST00000338427 COX5BP10606 129 aa11.28□□□□□ -0.6
NUDCD3-201ENST00000338427 ANPEPP15144 967 aa11.28□□□□□ -0.6
NUDCD3-201ENST00000338427 PCMT1P22061 227 aa11.28□□□□□ -0.6
NUDCD3-201ENST00000338427 SEC61A1P61619 476 aaKnown RBP11.28□□□□□ -0.6
NUDCD3-201ENST00000338427 SCRN3Q0VDG4 424 aa11.28□□□□□ -0.6
NUDCD3-201ENST00000338427 RFX4Q33E94 735 aa11.28□□□□□ -0.6
NUDCD3-201ENST00000338427 GPR139Q6DWJ6 353 aa11.28□□□□□ -0.6
NUDCD3-201ENST00000338427 OR2T2Q6IF00 324 aa11.28□□□□□ -0.6
NUDCD3-201ENST00000338427 SHQ1Q6PI26 577 aaKnown RBP11.28□□□□□ -0.6
NUDCD3-201ENST00000338427 DPY19L2P2Q6ZN68 376 aa11.28□□□□□ -0.6
NUDCD3-201ENST00000338427 LINC00346Q8IVM7 164 aa11.28□□□□□ -0.6
NUDCD3-201ENST00000338427 GLB1L2Q8IW92 636 aa11.28□□□□□ -0.6
NUDCD3-201ENST00000338427 OR6V1Q8N148 313 aa11.28□□□□□ -0.6
NUDCD3-201ENST00000338427 OR4K13Q8NH42 304 aa11.28□□□□□ -0.6
NUDCD3-201ENST00000338427 PTP4A1Q93096 173 aa11.28□□□□□ -0.6
NUDCD3-201ENST00000338427 TIMD4Q96H15 378 aa11.28□□□□□ -0.6
NUDCD3-201ENST00000338427 DHRS1Q96LJ7 313 aa11.28□□□□□ -0.6
NUDCD3-201ENST00000338427 SAMD8Q96LT4 415 aa11.28□□□□□ -0.6
NUDCD3-201ENST00000338427 NMNAT3Q96T66 252 aa11.28□□□□□ -0.6
NUDCD3-201ENST00000338427 FN3KQ9H479 309 aa11.28□□□□□ -0.6
NUDCD3-201ENST00000338427 GORASP2Q9H8Y8 452 aa11.28□□□□□ -0.6
NUDCD3-201ENST00000338427 CYSLTR2Q9NS75 346 aa11.28□□□□□ -0.6
NUDCD3-201ENST00000338427 CD300AQ9UGN4 299 aa11.28□□□□□ -0.6
NUDCD3-201ENST00000338427 ZDHHC8Q9ULC8 765 aa11.28□□□□□ -0.6
NUDCD3-201ENST00000338427 NPTNQ9Y639 398 aa11.28□□□□□ -0.6
NUDCD3-201ENST00000338427 LHFPL6Q9Y693 200 aa11.28□□□□□ -0.6
NUDCD3-201ENST00000338427 IGLV1-36A0A0B4J1U3 117 aa11.27□□□□□ -0.61
NUDCD3-201ENST00000338427 TRAPPC2LH3BP13 241 aa11.27□□□□□ -0.61
NUDCD3-201ENST00000338427 AHCYL1O43865 530 aa11.27□□□□□ -0.61
NUDCD3-201ENST00000338427 TXNDC12O95881 172 aa11.27□□□□□ -0.61
NUDCD3-201ENST00000338427 IGHV2-70P01814 119 aa11.27□□□□□ -0.61
NUDCD3-201ENST00000338427 HIST1H1CP16403 213 aaKnown RBP11.27□□□□□ -0.61
NUDCD3-201ENST00000338427 KITLGP21583 273 aa11.27□□□□□ -0.61
NUDCD3-201ENST00000338427 PRDX6P30041 224 aa11.27□□□□□ -0.61
NUDCD3-201ENST00000338427 LIPAP38571 399 aa11.27□□□□□ -0.61
NUDCD3-201ENST00000338427 LSM6P62312 80 aaKnown RBP11.27□□□□□ -0.61
NUDCD3-201ENST00000338427 SPIBQ01892 262 aa11.27□□□□□ -0.61
NUDCD3-201ENST00000338427 PPP1R8Q12972 351 aaKnown RBP11.27□□□□□ -0.61
NUDCD3-201ENST00000338427 KRT72Q14CN4 511 aa11.27□□□□□ -0.61
NUDCD3-201ENST00000338427 KCNMB1Q16558 191 aa11.27□□□□□ -0.61
NUDCD3-201ENST00000338427 SLC35F1Q5T1Q4 408 aa11.27□□□□□ -0.61
NUDCD3-201ENST00000338427 DCAF12L2Q5VW00 463 aa11.27□□□□□ -0.61
NUDCD3-201ENST00000338427 LEG1Q6P5S2 330 aa11.27□□□□□ -0.61
NUDCD3-201ENST00000338427 SMARCD3Q6STE5 483 aa11.27□□□□□ -0.61
NUDCD3-201ENST00000338427 ARL9Q6T311 187 aa11.27□□□□□ -0.61
NUDCD3-201ENST00000338427 UNQ6126/PRO20091Q6UXV3 157 aa11.27□□□□□ -0.61
NUDCD3-201ENST00000338427 ATG16L2Q8NAA4 619 aa11.27□□□□□ -0.61
NUDCD3-201ENST00000338427 SEMA6DQ8NFY4 1073 aa11.27□□□□□ -0.61
NUDCD3-201ENST00000338427 ZNF420Q8TAQ5 688 aaPredicted RBP11.27□□□□□ -0.61
NUDCD3-201ENST00000338427 ZNRF4Q8WWF5 429 aa11.27□□□□□ -0.61
NUDCD3-201ENST00000338427 RAB39BQ96DA2 213 aa11.27□□□□□ -0.61
NUDCD3-201ENST00000338427 GPX7Q96SL4 187 aaPredicted RBP11.27□□□□□ -0.61
NUDCD3-201ENST00000338427 OR52D1Q9H346 318 aa11.27□□□□□ -0.61
NUDCD3-201ENST00000338427 C7orf69Q9H7B7 122 aa11.27□□□□□ -0.61
NUDCD3-201ENST00000338427 SPAG4Q9NPE6 437 aa11.27□□□□□ -0.61
NUDCD3-201ENST00000338427 TMEM106BQ9NUM4 274 aa11.27□□□□□ -0.61
NUDCD3-201ENST00000338427 OR6C68A6NDL8 312 aa11.26□□□□□ -0.61
NUDCD3-201ENST00000338427 HAX1O00165 279 aa11.26□□□□□ -0.61
NUDCD3-201ENST00000338427 NDUFAB1O14561 156 aa11.26□□□□□ -0.61
NUDCD3-201ENST00000338427 GMNNO75496 209 aa11.26□□□□□ -0.61
NUDCD3-201ENST00000338427 GADD45GO95257 159 aa11.26□□□□□ -0.61
NUDCD3-201ENST00000338427 SELEP16581 610 aa11.26□□□□□ -0.61
NUDCD3-201ENST00000338427 GSTM3P21266 225 aa11.26□□□□□ -0.61
NUDCD3-201ENST00000338427 EPHA1P21709 976 aa11.26□□□□□ -0.61
NUDCD3-201ENST00000338427 ANOS1P23352 680 aa11.26□□□□□ -0.61
NUDCD3-201ENST00000338427 PMELP40967 661 aa11.26□□□□□ -0.61
NUDCD3-201ENST00000338427 RPS6KA3P51812 740 aa11.26□□□□□ -0.61
NUDCD3-201ENST00000338427 HIST1H3AP68431 136 aa11.26□□□□□ -0.61
NUDCD3-201ENST00000338427 HOXA4Q00056 320 aaPredicted RBP11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms