RNA–Protein interactions for RNA: ENST00000338399.8

CDK5RAP3-201, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP3, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-201ENST00000338399 MBD3L3A6NE82 208 aaPredicted RBP12.95□□□□□ -0.34
CDK5RAP3-201ENST00000338399 MBD3L5A6NJ08 208 aaPredicted RBP12.95□□□□□ -0.34
CDK5RAP3-201ENST00000338399 FIGNL2A6NMB9 653 aa12.95□□□□□ -0.34
CDK5RAP3-201ENST00000338399 DVL2O14641 736 aa12.95□□□□□ -0.34
CDK5RAP3-201ENST00000338399 RGS9O75916 674 aaPredicted RBP12.95□□□□□ -0.34
CDK5RAP3-201ENST00000338399 ZFPL1O95159 310 aa12.95□□□□□ -0.34
CDK5RAP3-201ENST00000338399 CD1AP06126 327 aa12.95□□□□□ -0.34
CDK5RAP3-201ENST00000338399 CST2P09228 141 aa12.95□□□□□ -0.34
CDK5RAP3-201ENST00000338399 KIR2DL2P43627 348 aaPredicted RBP12.95□□□□□ -0.34
CDK5RAP3-201ENST00000338399 MFGE8Q08431 387 aaPredicted RBP12.95□□□□□ -0.34
CDK5RAP3-201ENST00000338399 FOXF2Q12947 444 aa12.95□□□□□ -0.34
CDK5RAP3-201ENST00000338399 TAF13Q15543 124 aa12.95□□□□□ -0.34
CDK5RAP3-201ENST00000338399 TRAM1Q15629 374 aa12.95□□□□□ -0.34
CDK5RAP3-201ENST00000338399 STK11Q15831 433 aa12.95□□□□□ -0.34
CDK5RAP3-201ENST00000338399 C1orf185Q5T7R7 199 aa12.95□□□□□ -0.34
CDK5RAP3-201ENST00000338399 FBXW9Q5XUX1 488 aa12.95□□□□□ -0.34
CDK5RAP3-201ENST00000338399 GFRALQ6UXV0 394 aa12.95□□□□□ -0.34
CDK5RAP3-201ENST00000338399 C3P1Q6ZMU1 363 aa12.95□□□□□ -0.34
CDK5RAP3-201ENST00000338399 ALDH16A1Q8IZ83 802 aa12.95□□□□□ -0.34
CDK5RAP3-201ENST00000338399 MS4A15Q8N5U1 240 aa12.95□□□□□ -0.34
CDK5RAP3-201ENST00000338399 KBTBD8Q8NFY9 601 aa12.95□□□□□ -0.34
CDK5RAP3-201ENST00000338399 OR5AK2Q8NH90 309 aa12.95□□□□□ -0.34
CDK5RAP3-201ENST00000338399 MBD3L2Q8NHZ7 208 aaPredicted RBP12.95□□□□□ -0.34
CDK5RAP3-201ENST00000338399 PPP1R14AQ96A00 147 aa12.95□□□□□ -0.34
CDK5RAP3-201ENST00000338399 FAM215AQ9Y5M1 114 aa12.95□□□□□ -0.34
CDK5RAP3-201ENST00000338399 R4GMQ9 66 aa12.95□□□□□ -0.34
CDK5RAP3-201ENST00000338399 SRSF10O75494 262 aaKnown RBP12.94□□□□□ -0.34
CDK5RAP3-201ENST00000338399 PATE4P0C8F1 98 aa12.94□□□□□ -0.34
CDK5RAP3-201ENST00000338399 FGF9P31371 208 aaPredicted RBP12.94□□□□□ -0.34
CDK5RAP3-201ENST00000338399 PTGER4P35408 488 aa12.94□□□□□ -0.34
CDK5RAP3-201ENST00000338399 UGT2B10P36537 528 aa12.94□□□□□ -0.34
CDK5RAP3-201ENST00000338399 KIR3DL2P43630 455 aa12.94□□□□□ -0.34
CDK5RAP3-201ENST00000338399 PER3P56645 1201 aa12.94□□□□□ -0.34
CDK5RAP3-201ENST00000338399 HIST1H3AP68431 136 aa12.94□□□□□ -0.34
CDK5RAP3-201ENST00000338399 ODF4Q2M2E3 257 aa12.94□□□□□ -0.34
CDK5RAP3-201ENST00000338399 CCDC92Q53HC0 331 aaPredicted RBP12.94□□□□□ -0.34
CDK5RAP3-201ENST00000338399 WDR38Q5JTN6 314 aa12.94□□□□□ -0.34
CDK5RAP3-201ENST00000338399 HIST2H3PS2Q5TEC6 136 aa12.94□□□□□ -0.34
CDK5RAP3-201ENST00000338399 FDX2Q6P4F2 183 aa12.94□□□□□ -0.34
CDK5RAP3-201ENST00000338399 VWA1Q6PCB0 445 aa12.94□□□□□ -0.34
CDK5RAP3-201ENST00000338399 HIST2H3AQ71DI3 136 aa12.94□□□□□ -0.34
CDK5RAP3-201ENST00000338399 SLC16A14Q7RTX9 510 aa12.94□□□□□ -0.34
CDK5RAP3-201ENST00000338399 SKA3Q8IX90 412 aa12.94□□□□□ -0.34
CDK5RAP3-201ENST00000338399 RPRMLQ8N4K4 120 aa12.94□□□□□ -0.34
CDK5RAP3-201ENST00000338399 C4orf45Q96LM5 186 aa12.94□□□□□ -0.34
CDK5RAP3-201ENST00000338399 COQ7Q99807 217 aa12.94□□□□□ -0.34
CDK5RAP3-201ENST00000338399 MALT1Q9UDY8 824 aa12.94□□□□□ -0.34
CDK5RAP3-201ENST00000338399 SLC5A6Q9Y289 635 aa12.94□□□□□ -0.34
CDK5RAP3-201ENST00000338399 GSTK1Q9Y2Q3 226 aa12.94□□□□□ -0.34
CDK5RAP3-201ENST00000338399 ZZEF1O43149 2961 aa12.94□□□□□ -0.34
CDK5RAP3-201ENST00000338399 A0A096LPE4 126 aa12.93□□□□□ -0.34
CDK5RAP3-201ENST00000338399 TMEM269A0A1B0GVZ9 245 aa12.93□□□□□ -0.34
CDK5RAP3-201ENST00000338399 A0A1W2PPZ6 126 aa12.93□□□□□ -0.34
CDK5RAP3-201ENST00000338399 OR4C45A6NMZ5 311 aa12.93□□□□□ -0.34
CDK5RAP3-201ENST00000338399 GPRIN2O60269 458 aa12.93□□□□□ -0.34
CDK5RAP3-201ENST00000338399 TOXO94900 526 aa12.93□□□□□ -0.34
CDK5RAP3-201ENST00000338399 FARS2O95363 451 aaKnown RBP12.93□□□□□ -0.34
CDK5RAP3-201ENST00000338399 HSD11B1P28845 292 aa12.93□□□□□ -0.34
CDK5RAP3-201ENST00000338399 RPS11P62280 158 aaKnown RBP eCLIP12.93□□□□□ -0.34
CDK5RAP3-201ENST00000338399 ACSM3Q53FZ2 586 aa12.93□□□□□ -0.34
CDK5RAP3-201ENST00000338399 TFAP2EQ6VUC0 442 aa12.93□□□□□ -0.34
CDK5RAP3-201ENST00000338399 RHOUQ7L0Q8 258 aa12.93□□□□□ -0.34
CDK5RAP3-201ENST00000338399 ABHD12BQ7Z5M8 362 aaPredicted RBP12.93□□□□□ -0.34
CDK5RAP3-201ENST00000338399 CATSPERDQ86XM0 798 aa12.93□□□□□ -0.34
CDK5RAP3-201ENST00000338399 FGFBP3Q8TAT2 258 aa12.93□□□□□ -0.34
CDK5RAP3-201ENST00000338399 DYNC2LI1Q8TCX1 351 aa12.93□□□□□ -0.34
CDK5RAP3-201ENST00000338399 KCTD7Q96MP8 289 aa12.93□□□□□ -0.34
CDK5RAP3-201ENST00000338399 GALNT8Q9NY28 637 aa12.93□□□□□ -0.34
CDK5RAP3-201ENST00000338399 PLEK2Q9NYT0 353 aa12.93□□□□□ -0.34
CDK5RAP3-201ENST00000338399 SLC22A13Q9Y226 551 aa12.93□□□□□ -0.34
CDK5RAP3-201ENST00000338399 ZNF281Q9Y2X9 895 aa12.93□□□□□ -0.34
CDK5RAP3-201ENST00000338399 MAP1BP46821 2468 aaKnown RBP12.93□□□□□ -0.34
CDK5RAP3-201ENST00000338399 INTS1Q8N201 2190 aaKnown RBP12.93□□□□□ -0.34
CDK5RAP3-201ENST00000338399 LOC110117498-PIK3R3F6TDL0 507 aa12.93□□□□□ -0.34
CDK5RAP3-201ENST00000338399 ZNF32P17041 273 aa12.93□□□□□ -0.34
CDK5RAP3-201ENST00000338399 GALP22466 123 aa12.93□□□□□ -0.34
CDK5RAP3-201ENST00000338399 PRKXP51817 358 aa12.93□□□□□ -0.34
CDK5RAP3-201ENST00000338399 NRN1LQ496H8 165 aa12.93□□□□□ -0.34
CDK5RAP3-201ENST00000338399 ZNF544Q6NX49 715 aa12.93□□□□□ -0.34
CDK5RAP3-201ENST00000338399 CEACAM19Q7Z692 300 aa12.93□□□□□ -0.34
CDK5RAP3-201ENST00000338399 RDH10Q8IZV5 341 aa12.93□□□□□ -0.34
CDK5RAP3-201ENST00000338399 ZNF676Q8N7Q3 588 aa12.93□□□□□ -0.34
CDK5RAP3-201ENST00000338399 OR6K3Q8NGY3 331 aa12.93□□□□□ -0.34
CDK5RAP3-201ENST00000338399 RGP1Q92546 391 aaPredicted RBP12.93□□□□□ -0.34
CDK5RAP3-201ENST00000338399 ATF6BQ99941 703 aa12.93□□□□□ -0.34
CDK5RAP3-201ENST00000338399 COMMD4Q9H0A8 199 aa12.93□□□□□ -0.34
CDK5RAP3-201ENST00000338399 KCNN2Q9H2S1 579 aa12.93□□□□□ -0.34
CDK5RAP3-201ENST00000338399 BRD7Q9NPI1 651 aa12.93□□□□□ -0.34
CDK5RAP3-201ENST00000338399 G6PC2Q9NQR9 355 aa12.93□□□□□ -0.34
CDK5RAP3-201ENST00000338399 DSPP15924 2871 aaKnown RBP12.92□□□□□ -0.34
CDK5RAP3-201ENST00000338399 TTLL8A6PVC2 850 aa12.92□□□□□ -0.34
CDK5RAP3-201ENST00000338399 PRRG2O14669 202 aa12.92□□□□□ -0.34
CDK5RAP3-201ENST00000338399 SGCEO43556 437 aa12.92□□□□□ -0.34
CDK5RAP3-201ENST00000338399 SC5DO75845 299 aa12.92□□□□□ -0.34
CDK5RAP3-201ENST00000338399 SERPINA3P01011 423 aa12.92□□□□□ -0.34
CDK5RAP3-201ENST00000338399 ITGA5P08648 1049 aa12.92□□□□□ -0.34
CDK5RAP3-201ENST00000338399 MPGP29372 298 aa12.92□□□□□ -0.34
CDK5RAP3-201ENST00000338399 DCTDP32321 178 aa12.92□□□□□ -0.34
CDK5RAP3-201ENST00000338399 MAGEB1P43366 347 aa12.92□□□□□ -0.34
CDK5RAP3-201ENST00000338399 CCR9P51686 369 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms