RNA–Protein interactions for RNA: ENST00000336873.9

HPS4-201, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HPS4, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-201ENST00000336873 ZNF254O75437 659 aa7.42□□□□□ -1.22
HPS4-201ENST00000336873 NSA2O95478 260 aaKnown RBP7.42□□□□□ -1.22
HPS4-201ENST00000336873 DLX5P56178 289 aa7.42□□□□□ -1.22
HPS4-201ENST00000336873 PMPCAQ10713 525 aa7.42□□□□□ -1.22
HPS4-201ENST00000336873 CREB3L2Q70SY1 520 aa7.42□□□□□ -1.22
HPS4-201ENST00000336873 PEG10Q86TG7 708 aaKnown RBP7.42□□□□□ -1.22
HPS4-201ENST00000336873 OR51T1Q8NGJ9 327 aa7.42□□□□□ -1.22
HPS4-201ENST00000336873 OR1L3Q8NH93 324 aa7.42□□□□□ -1.22
HPS4-201ENST00000336873 OR14A16Q8NHC5 309 aa7.42□□□□□ -1.22
HPS4-201ENST00000336873 CCDC107Q8WV48 283 aa7.42□□□□□ -1.22
HPS4-201ENST00000336873 SMIM4Q8WVI0 70 aa7.42□□□□□ -1.22
HPS4-201ENST00000336873 TSNAXQ99598 290 aaKnown RBP7.42□□□□□ -1.22
HPS4-201ENST00000336873 GSX2Q9BZM3 304 aa7.42□□□□□ -1.22
HPS4-201ENST00000336873 NIPAL2Q9H841 368 aa7.42□□□□□ -1.22
HPS4-201ENST00000336873 INPP5EQ9NRR6 644 aa7.42□□□□□ -1.22
HPS4-201ENST00000336873 UPB1Q9UBR1 384 aa7.42□□□□□ -1.22
HPS4-201ENST00000336873 PTRH2Q9Y3E5 179 aaKnown RBP7.42□□□□□ -1.22
HPS4-201ENST00000336873 PCDHGA1Q9Y5H4 931 aa7.42□□□□□ -1.22
HPS4-201ENST00000336873 A0A1W2PP11 408 aa7.42□□□□□ -1.22
HPS4-201ENST00000336873 H3BMH7 237 aa7.42□□□□□ -1.22
HPS4-201ENST00000336873 GABARAPH6UMI1 98 aa7.42□□□□□ -1.22
HPS4-201ENST00000336873 BCAT2O15382 392 aaPredicted RBP7.42□□□□□ -1.22
HPS4-201ENST00000336873 JMJD7P0C870 316 aa7.42□□□□□ -1.22
HPS4-201ENST00000336873 RPA2P15927 270 aa7.42□□□□□ -1.22
HPS4-201ENST00000336873 CLDN17P56750 224 aa7.42□□□□□ -1.22
HPS4-201ENST00000336873 CSNK2A1P68400 391 aaPredicted RBP7.42□□□□□ -1.22
HPS4-201ENST00000336873 RBMS2Q15434 407 aaKnown RBP7.42□□□□□ -1.22
HPS4-201ENST00000336873 CLEC9AQ6UXN8 241 aa7.42□□□□□ -1.22
HPS4-201ENST00000336873 UEVLDQ8IX04 471 aa7.42□□□□□ -1.22
HPS4-201ENST00000336873 PDZD9Q8IXQ8 264 aa7.42□□□□□ -1.22
HPS4-201ENST00000336873 C20orf196Q8IYI0 205 aa7.42□□□□□ -1.22
HPS4-201ENST00000336873 DND1Q8IYX4 353 aaKnown RBP7.42□□□□□ -1.22
HPS4-201ENST00000336873 MUC20Q8N307 709 aaPredicted RBP7.42□□□□□ -1.22
HPS4-201ENST00000336873 CSNK2A3Q8NEV1 391 aa7.42□□□□□ -1.22
HPS4-201ENST00000336873 ANGPTL6Q8NI99 470 aa7.42□□□□□ -1.22
HPS4-201ENST00000336873 KISS1RQ969F8 398 aaPredicted RBP7.42□□□□□ -1.22
HPS4-201ENST00000336873 KIAA1143Q96AT1 154 aaPredicted RBP7.42□□□□□ -1.22
HPS4-201ENST00000336873 MIB2Q96AX9 1013 aa7.42□□□□□ -1.22
HPS4-201ENST00000336873 NPAS1Q99742 590 aa7.42□□□□□ -1.22
HPS4-201ENST00000336873 AKIRIN1Q9H9L7 192 aaPredicted RBP7.42□□□□□ -1.22
HPS4-201ENST00000336873 DLL4Q9NR61 685 aa7.42□□□□□ -1.22
HPS4-201ENST00000336873 CLEC1BQ9P126 229 aa7.42□□□□□ -1.22
HPS4-201ENST00000336873 CYB5R1Q9UHQ9 305 aa7.42□□□□□ -1.22
HPS4-201ENST00000336873 RARRES3Q9UL19 164 aa7.42□□□□□ -1.22
HPS4-201ENST00000336873 LSM5Q9Y4Y9 91 aaKnown RBP7.42□□□□□ -1.22
HPS4-201ENST00000336873 TLCD2A6NGC4 264 aa7.41□□□□□ -1.22
HPS4-201ENST00000336873 ZNF850A8MQ14 1090 aa7.41□□□□□ -1.22
HPS4-201ENST00000336873 NPIPA2E9PIF3 369 aa7.41□□□□□ -1.22
HPS4-201ENST00000336873 NPIPA3F8WFD2 350 aa7.41□□□□□ -1.22
HPS4-201ENST00000336873 TNFRSF10CO14798 259 aa7.41□□□□□ -1.22
HPS4-201ENST00000336873 RER1O15258 196 aa7.41□□□□□ -1.22
HPS4-201ENST00000336873 ZNF208O43345 1280 aa7.41□□□□□ -1.22
HPS4-201ENST00000336873 PNPP00491 289 aa7.41□□□□□ -1.22
HPS4-201ENST00000336873 KLK3P07288 261 aaPredicted RBP7.41□□□□□ -1.22
HPS4-201ENST00000336873 GUSBP08236 651 aa7.41□□□□□ -1.22
HPS4-201ENST00000336873 FOSL2P15408 326 aa7.41□□□□□ -1.22
HPS4-201ENST00000336873 OPRM1P35372 400 aa7.41□□□□□ -1.22
HPS4-201ENST00000336873 NUDT1P36639 197 aa7.41□□□□□ -1.22
HPS4-201ENST00000336873 DLSTP36957 453 aa7.41□□□□□ -1.22
HPS4-201ENST00000336873 EPHA4P54764 986 aa7.41□□□□□ -1.22
HPS4-201ENST00000336873 PER3P56645 1201 aa7.41□□□□□ -1.22
HPS4-201ENST00000336873 HSD17B7P56937 341 aa7.41□□□□□ -1.22
HPS4-201ENST00000336873 AIMP2Q13155 320 aaKnown RBP7.41□□□□□ -1.22
HPS4-201ENST00000336873 ZNF658BQ4V348 819 aaPredicted RBP7.41□□□□□ -1.22
HPS4-201ENST00000336873 PWWP2BQ6NUJ5 590 aa7.41□□□□□ -1.22
HPS4-201ENST00000336873 DNM1P34Q6PK57 102 aa7.41□□□□□ -1.22
HPS4-201ENST00000336873 LRRTM1Q86UE6 522 aa7.41□□□□□ -1.22
HPS4-201ENST00000336873 OR10R2Q8NGX6 335 aa7.41□□□□□ -1.22
HPS4-201ENST00000336873 NT5CQ8TCD5 201 aa7.41□□□□□ -1.22
HPS4-201ENST00000336873 CXorf58Q96LI9 332 aa7.41□□□□□ -1.22
HPS4-201ENST00000336873 VN1R1Q9GZP7 353 aa7.41□□□□□ -1.22
HPS4-201ENST00000336873 DUSP15Q9H1R2 295 aaPredicted RBP7.41□□□□□ -1.22
HPS4-201ENST00000336873 NTMQ9P121 344 aa7.41□□□□□ -1.22
HPS4-201ENST00000336873 CHRNA9Q9UGM1 479 aa7.41□□□□□ -1.22
HPS4-201ENST00000336873 STEAP1Q9UHE8 339 aa7.41□□□□□ -1.22
HPS4-201ENST00000336873 ZNF223Q9UK11 482 aaPredicted RBP7.41□□□□□ -1.22
HPS4-201ENST00000336873 OR52A1Q9UKL2 312 aa7.41□□□□□ -1.22
HPS4-201ENST00000336873 CUL9Q8IWT3 2517 aa7.41□□□□□ -1.22
HPS4-201ENST00000336873 PRSS44E7EML9 344 aa7.41□□□□□ -1.22
HPS4-201ENST00000336873 WISP1O95388 367 aa7.41□□□□□ -1.22
HPS4-201ENST00000336873 LCATP04180 440 aa7.41□□□□□ -1.22
HPS4-201ENST00000336873 HAAOP46952 286 aa7.41□□□□□ -1.22
HPS4-201ENST00000336873 CLDN6P56747 220 aa7.41□□□□□ -1.22
HPS4-201ENST00000336873 RPL27P61353 136 aaKnown RBP7.41□□□□□ -1.22
HPS4-201ENST00000336873 MFGE8Q08431 387 aaPredicted RBP7.41□□□□□ -1.22
HPS4-201ENST00000336873 SWI5Q1ZZU3 235 aa7.41□□□□□ -1.22
HPS4-201ENST00000336873 DUSP18Q8NEJ0 188 aa7.41□□□□□ -1.22
HPS4-201ENST00000336873 OR1J2Q8NGS2 313 aa7.41□□□□□ -1.22
HPS4-201ENST00000336873 RADILQ96JH8 1075 aa7.41□□□□□ -1.22
HPS4-201ENST00000336873 DCBLD2Q96PD2 775 aa7.41□□□□□ -1.22
HPS4-201ENST00000336873 WWTR1Q9GZV5 400 aa7.41□□□□□ -1.22
HPS4-201ENST00000336873 CST11Q9H112 138 aa7.41□□□□□ -1.22
HPS4-201ENST00000336873 PTGES2Q9H7Z7 377 aa7.41□□□□□ -1.22
HPS4-201ENST00000336873 LRP12Q9Y561 859 aa7.41□□□□□ -1.22
HPS4-201ENST00000336873 PRSS37A4D1T9 235 aa7.41□□□□□ -1.22
HPS4-201ENST00000336873 TOR1AO14656 332 aa7.41□□□□□ -1.22
HPS4-201ENST00000336873 TLX3O43711 291 aaPredicted RBP7.41□□□□□ -1.22
HPS4-201ENST00000336873 ANGPTL7O43827 346 aa7.41□□□□□ -1.22
HPS4-201ENST00000336873 PTP4A3O75365 173 aa7.41□□□□□ -1.22
HPS4-201ENST00000336873 IGF2P01344 180 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms