RNA–Protein interactions for RNA: ENST00000334136.9

HDAC6-201, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-201ENST00000334136 S100GP29377 79 aa10.66□□□□□ -0.7
HDAC6-201ENST00000334136 GALNSP34059 522 aa10.66□□□□□ -0.7
HDAC6-201ENST00000334136 UCNP55089 124 aa10.66□□□□□ -0.7
HDAC6-201ENST00000334136 BCL2A1Q16548 175 aa10.66□□□□□ -0.7
HDAC6-201ENST00000334136 OR52B4Q8NGK2 314 aa10.66□□□□□ -0.7
HDAC6-201ENST00000334136 VRK1Q99986 396 aaPredicted RBP10.66□□□□□ -0.7
HDAC6-201ENST00000334136 TGIF2Q9GZN2 237 aa10.66□□□□□ -0.7
HDAC6-201ENST00000334136 MIXL1Q9H2W2 232 aa10.66□□□□□ -0.7
HDAC6-201ENST00000334136 B3GAT2Q9NPZ5 323 aa10.66□□□□□ -0.7
HDAC6-201ENST00000334136 LANCL2Q9NS86 450 aa10.66□□□□□ -0.7
HDAC6-201ENST00000334136 HOXB5P09067 269 aa10.66□□□□□ -0.7
HDAC6-201ENST00000334136 NAGAP17050 411 aa10.66□□□□□ -0.7
HDAC6-201ENST00000334136 RAB6AP20340 208 aa10.66□□□□□ -0.7
HDAC6-201ENST00000334136 DCTDP32321 178 aa10.66□□□□□ -0.7
HDAC6-201ENST00000334136 EIF1P41567 113 aaKnown RBP10.66□□□□□ -0.7
HDAC6-201ENST00000334136 P2RX1P51575 399 aa10.66□□□□□ -0.7
HDAC6-201ENST00000334136 MVDP53602 400 aa10.66□□□□□ -0.7
HDAC6-201ENST00000334136 FUT7Q11130 342 aa10.66□□□□□ -0.7
HDAC6-201ENST00000334136 CARD17Q5XLA6 110 aa10.66□□□□□ -0.7
HDAC6-201ENST00000334136 SLC51BQ86UW2 128 aa10.66□□□□□ -0.7
HDAC6-201ENST00000334136 CMTM4Q8IZR5 234 aa10.66□□□□□ -0.7
HDAC6-201ENST00000334136 NUBPLQ8TB37 319 aa10.66□□□□□ -0.7
HDAC6-201ENST00000334136 SCARB1Q8WTV0 552 aa10.66□□□□□ -0.7
HDAC6-201ENST00000334136 RASD2Q96D21 266 aa10.66□□□□□ -0.7
HDAC6-201ENST00000334136 SLC38A1Q9H2H9 487 aa10.66□□□□□ -0.7
HDAC6-201ENST00000334136 ELOVL3Q9HB03 270 aa10.66□□□□□ -0.7
HDAC6-201ENST00000334136 SH3BGRL2Q9UJC5 107 aa10.66□□□□□ -0.7
HDAC6-201ENST00000334136 MCTS1Q9ULC4 181 aaKnown RBP10.66□□□□□ -0.7
HDAC6-201ENST00000334136 SLC16A7O60669 478 aa10.66□□□□□ -0.7
HDAC6-201ENST00000334136 CBR1P16152 277 aa10.66□□□□□ -0.7
HDAC6-201ENST00000334136 TUBG1P23258 451 aa10.66□□□□□ -0.7
HDAC6-201ENST00000334136 PTBP1P26599 531 aaKnown RBP eCLIP10.66□□□□□ -0.71e-16■■■■■ 43.3
HDAC6-201ENST00000334136 EMDP50402 254 aa10.66□□□□□ -0.7
HDAC6-201ENST00000334136 PRPS1P60891 318 aa10.66□□□□□ -0.7
HDAC6-201ENST00000334136 SLC9A3R2Q15599 337 aa10.66□□□□□ -0.7
HDAC6-201ENST00000334136 OR1C1Q15619 314 aa10.66□□□□□ -0.7
HDAC6-201ENST00000334136 OR7A5Q15622 319 aa10.66□□□□□ -0.7
HDAC6-201ENST00000334136 AWAT2Q6E213 333 aa10.66□□□□□ -0.7
HDAC6-201ENST00000334136 OR4C3Q8NH37 302 aa10.66□□□□□ -0.7
HDAC6-201ENST00000334136 ANGPTL6Q8NI99 470 aa10.66□□□□□ -0.7
HDAC6-201ENST00000334136 TRMT61AQ96FX7 289 aaKnown RBP10.66□□□□□ -0.7
HDAC6-201ENST00000334136 INTS14Q96SY0 518 aa10.66□□□□□ -0.7
HDAC6-201ENST00000334136 SPSB2Q99619 263 aa10.66□□□□□ -0.7
HDAC6-201ENST00000334136 A4GNTQ9UNA3 340 aa10.66□□□□□ -0.7
HDAC6-201ENST00000334136 LSM5Q9Y4Y9 91 aaKnown RBP10.66□□□□□ -0.7
HDAC6-201ENST00000334136 TMEM184BQ9Y519 407 aaPredicted RBP10.66□□□□□ -0.7
HDAC6-201ENST00000334136 TPOP07202 933 aa10.65□□□□□ -0.7
HDAC6-201ENST00000334136 TPT1P13693 172 aaKnown RBP10.65□□□□□ -0.7
HDAC6-201ENST00000334136 ZNF43P17038 809 aa10.65□□□□□ -0.7
HDAC6-201ENST00000334136 CXCL3P19876 107 aa10.65□□□□□ -0.7
HDAC6-201ENST00000334136 CD79BP40259 229 aa10.65□□□□□ -0.7
HDAC6-201ENST00000334136 RFC3P40938 356 aa10.65□□□□□ -0.7
HDAC6-201ENST00000334136 CSNK2A1P68400 391 aaPredicted RBP10.65□□□□□ -0.7
HDAC6-201ENST00000334136 DUSP2Q05923 314 aa10.65□□□□□ -0.7
HDAC6-201ENST00000334136 MPEG1Q2M385 716 aa10.65□□□□□ -0.7
HDAC6-201ENST00000334136 STEAP1BQ6NZ63 245 aa10.65□□□□□ -0.7
HDAC6-201ENST00000334136 ZNF321PQ8N8H1 164 aa10.65□□□□□ -0.7
HDAC6-201ENST00000334136 FOXRED1Q96CU9 486 aaPredicted RBP10.65□□□□□ -0.7
HDAC6-201ENST00000334136 Q96M85 177 aa10.65□□□□□ -0.7
HDAC6-201ENST00000334136 MARVELD1Q9BSK0 173 aa10.65□□□□□ -0.7
HDAC6-201ENST00000334136 ST6GALNAC5Q9BVH7 336 aa10.65□□□□□ -0.7
HDAC6-201ENST00000334136 EMC3Q9P0I2 261 aa10.65□□□□□ -0.7
HDAC6-201ENST00000334136 HS3ST3B1Q9Y662 390 aa10.65□□□□□ -0.7
HDAC6-201ENST00000334136 DENND4AQ7Z401 1863 aa10.65□□□□□ -0.7
HDAC6-201ENST00000334136 ZNF593O00488 134 aaPredicted RBP10.65□□□□□ -0.7
HDAC6-201ENST00000334136 ACSM4P0C7M7 580 aa10.65□□□□□ -0.7
HDAC6-201ENST00000334136 PPT1P50897 306 aa10.65□□□□□ -0.7
HDAC6-201ENST00000334136 POLR2HP52434 150 aaKnown RBP10.65□□□□□ -0.7
HDAC6-201ENST00000334136 SLC37A1P57057 533 aa10.65□□□□□ -0.7
HDAC6-201ENST00000334136 CAMK2BQ13554 666 aa10.65□□□□□ -0.7
HDAC6-201ENST00000334136 C12orf73Q69YU5 71 aa10.65□□□□□ -0.7
HDAC6-201ENST00000334136 KIRREL2Q6UWL6 708 aa10.65□□□□□ -0.7
HDAC6-201ENST00000334136 YRDCQ86U90 279 aaKnown RBP10.65□□□□□ -0.7
HDAC6-201ENST00000334136 PLPP7Q8NBV4 271 aa10.65□□□□□ -0.7
HDAC6-201ENST00000334136 OR10G3Q8NGC4 313 aa10.65□□□□□ -0.7
HDAC6-201ENST00000334136 CHAC2Q8WUX2 184 aa10.65□□□□□ -0.7
HDAC6-201ENST00000334136 TOMM40LQ969M1 308 aa10.65□□□□□ -0.7
HDAC6-201ENST00000334136 ABHD1Q96SE0 405 aa10.65□□□□□ -0.7
HDAC6-201ENST00000334136 PIGQQ9BRB3 760 aa10.65□□□□□ -0.7
HDAC6-201ENST00000334136 CYSLTR2Q9NS75 346 aa10.65□□□□□ -0.7
HDAC6-201ENST00000334136 TMED7-TICAM2A0A0A6YYA0 188 aa10.65□□□□□ -0.71
HDAC6-201ENST00000334136 LOC101059948A0A1B0GTJ6 334 aa10.65□□□□□ -0.71
HDAC6-201ENST00000334136 GAAP10253 952 aa10.65□□□□□ -0.71
HDAC6-201ENST00000334136 CAMLGP49069 296 aa10.65□□□□□ -0.71
HDAC6-201ENST00000334136 TAS2R19P59542 299 aa10.65□□□□□ -0.71
HDAC6-201ENST00000334136 NIPAL3Q6P499 406 aa10.65□□□□□ -0.71
HDAC6-201ENST00000334136 RHOUQ7L0Q8 258 aa10.65□□□□□ -0.71
HDAC6-201ENST00000334136 PXKQ7Z7A4 578 aa10.65□□□□□ -0.71
HDAC6-201ENST00000334136 ZNF100Q8IYN0 542 aa10.65□□□□□ -0.71
HDAC6-201ENST00000334136 DND1Q8IYX4 353 aaKnown RBP10.65□□□□□ -0.71
HDAC6-201ENST00000334136 RNF170Q96K19 258 aa10.65□□□□□ -0.71
HDAC6-201ENST00000334136 HRASLSQ9HDD0 168 aa10.65□□□□□ -0.71
HDAC6-201ENST00000334136 FGF20Q9NP95 211 aaPredicted RBP10.65□□□□□ -0.71
HDAC6-201ENST00000334136 TMED7Q9Y3B3 224 aa10.65□□□□□ -0.71
HDAC6-201ENST00000334136 DNAJC13O75165 2243 aa10.64□□□□□ -0.71
HDAC6-201ENST00000334136 BORCS7-ASMTA0A0B4J1R7 106 aa10.64□□□□□ -0.71
HDAC6-201ENST00000334136 C9orf172C9J069 976 aa10.64□□□□□ -0.71
HDAC6-201ENST00000334136 SURF4O15260 269 aa10.64□□□□□ -0.71
HDAC6-201ENST00000334136 OR8U9P0C7N5 309 aa10.64□□□□□ -0.71
HDAC6-201ENST00000334136 CDK2P24941 298 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms