RNA–Protein interactions for RNA: ENST00000332345.10

LIMS1-201, Transcript of LIM zinc finger domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS1, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-201ENST00000332345 SPI1P17947 270 aa12.04□□□□□ -0.48
LIMS1-201ENST00000332345 GCH1P30793 250 aa12.04□□□□□ -0.48
LIMS1-201ENST00000332345 WNT5AP41221 380 aa12.04□□□□□ -0.48
LIMS1-201ENST00000332345 DAPP51397 102 aa12.04□□□□□ -0.48
LIMS1-201ENST00000332345 KLF3P57682 345 aaPredicted RBP12.04□□□□□ -0.48
LIMS1-201ENST00000332345 ESRRGP62508 458 aa12.04□□□□□ -0.48
LIMS1-201ENST00000332345 HIST1H3AP68431 136 aa12.04□□□□□ -0.48
LIMS1-201ENST00000332345 TNK1Q13470 666 aa12.04□□□□□ -0.48
LIMS1-201ENST00000332345 KPNB1Q14974 876 aaKnown RBP12.04□□□□□ -0.48
LIMS1-201ENST00000332345 CCDC92Q53HC0 331 aaPredicted RBP12.04□□□□□ -0.48
LIMS1-201ENST00000332345 ELFN2Q5R3F8 820 aa12.04□□□□□ -0.48
LIMS1-201ENST00000332345 HIST2H3PS2Q5TEC6 136 aa12.04□□□□□ -0.48
LIMS1-201ENST00000332345 OTPQ5XKR4 325 aa12.04□□□□□ -0.48
LIMS1-201ENST00000332345 ACSM5Q6NUN0 579 aa12.04□□□□□ -0.48
LIMS1-201ENST00000332345 CORO6Q6QEF8 472 aa12.04□□□□□ -0.48
LIMS1-201ENST00000332345 CLEC2AQ6UVW9 174 aa12.04□□□□□ -0.48
LIMS1-201ENST00000332345 HIST2H3AQ71DI3 136 aa12.04□□□□□ -0.48
LIMS1-201ENST00000332345 LRP11Q86VZ4 500 aa12.04□□□□□ -0.48
LIMS1-201ENST00000332345 PARP8Q8N3A8 854 aa12.04□□□□□ -0.48
LIMS1-201ENST00000332345 IQCF1Q8N6M8 205 aa12.04□□□□□ -0.48
LIMS1-201ENST00000332345 OR9Q1Q8NGQ5 310 aa12.04□□□□□ -0.48
LIMS1-201ENST00000332345 IPCEF1Q8WWN9 437 aaPredicted RBP12.04□□□□□ -0.48
LIMS1-201ENST00000332345 NEU4Q8WWR8 484 aaPredicted RBP12.04□□□□□ -0.48
LIMS1-201ENST00000332345 PYDC1Q8WXC3 89 aa12.04□□□□□ -0.48
LIMS1-201ENST00000332345 OTULINQ96BN8 352 aa12.04□□□□□ -0.48
LIMS1-201ENST00000332345 PLEKHA8Q96JA3 519 aa12.04□□□□□ -0.48
LIMS1-201ENST00000332345 C18orf12Q96KH6 178 aa12.04□□□□□ -0.48
LIMS1-201ENST00000332345 COG8Q96MW5 612 aa12.04□□□□□ -0.48
LIMS1-201ENST00000332345 DCLRE1CQ96SD1 692 aaKnown RBP12.04□□□□□ -0.48
LIMS1-201ENST00000332345 HDHD2Q9H0R4 259 aa12.04□□□□□ -0.48
LIMS1-201ENST00000332345 KRT84Q9NSB2 600 aa12.04□□□□□ -0.48
LIMS1-201ENST00000332345 TBCCD1Q9NVR7 557 aa12.04□□□□□ -0.48
LIMS1-201ENST00000332345 CYB5R1Q9UHQ9 305 aa12.04□□□□□ -0.48
LIMS1-201ENST00000332345 GRIP1Q9Y3R0 1128 aa12.04□□□□□ -0.48
LIMS1-201ENST00000332345 ACANP16112 2415 aa12.03□□□□□ -0.48
LIMS1-201ENST00000332345 A0A1W2PPW3 197 aa12.03□□□□□ -0.48
LIMS1-201ENST00000332345 CSF3P09919 207 aa12.03□□□□□ -0.48
LIMS1-201ENST00000332345 GGT2P36268 569 aa12.03□□□□□ -0.48
LIMS1-201ENST00000332345 CRISP1P54107 249 aa12.03□□□□□ -0.48
LIMS1-201ENST00000332345 PPP1CBP62140 327 aa12.03□□□□□ -0.48
LIMS1-201ENST00000332345 DBPQ10586 325 aaPredicted RBP12.03□□□□□ -0.48
LIMS1-201ENST00000332345 ECH1Q13011 328 aa12.03□□□□□ -0.48
LIMS1-201ENST00000332345 NKPD1Q17RQ9 610 aa12.03□□□□□ -0.48
LIMS1-201ENST00000332345 MSMPQ1L6U9 139 aa12.03□□□□□ -0.48
LIMS1-201ENST00000332345 SLC18B1Q6NT16 456 aa12.03□□□□□ -0.48
LIMS1-201ENST00000332345 ZNF101Q8IZC7 436 aa12.03□□□□□ -0.48
LIMS1-201ENST00000332345 OR51L1Q8NGJ5 315 aa12.03□□□□□ -0.48
LIMS1-201ENST00000332345 ABHD4Q8TB40 342 aa12.03□□□□□ -0.48
LIMS1-201ENST00000332345 PTP4A1Q93096 173 aa12.03□□□□□ -0.48
LIMS1-201ENST00000332345 SORCS2Q96PQ0 1159 aa12.03□□□□□ -0.48
LIMS1-201ENST00000332345 PITX2Q99697 317 aa12.03□□□□□ -0.48
LIMS1-201ENST00000332345 COQ7Q99807 217 aa12.03□□□□□ -0.48
LIMS1-201ENST00000332345 MYOZ1Q9NP98 299 aaPredicted RBP12.03□□□□□ -0.48
LIMS1-201ENST00000332345 DLL4Q9NR61 685 aa12.03□□□□□ -0.48
LIMS1-201ENST00000332345 MRPL22Q9NWU5 206 aaKnown RBP12.03□□□□□ -0.48
LIMS1-201ENST00000332345 TAAR3PQ9P1P4 343 aa12.03□□□□□ -0.48
LIMS1-201ENST00000332345 ENOPH1Q9UHY7 261 aa12.03□□□□□ -0.48
LIMS1-201ENST00000332345 FLNAP21333 2647 aaKnown RBP12.03□□□□□ -0.48
LIMS1-201ENST00000332345 IGLV3-9A0A075B6K5 115 aa12.02□□□□□ -0.49
LIMS1-201ENST00000332345 TRIM64A6NGJ6 449 aa12.02□□□□□ -0.49
LIMS1-201ENST00000332345 TVP23AA6NH52 213 aa12.02□□□□□ -0.49
LIMS1-201ENST00000332345 TRIM64BA6NI03 449 aa12.02□□□□□ -0.49
LIMS1-201ENST00000332345 PRR23D1E9PI22 279 aaPredicted RBP12.02□□□□□ -0.49
LIMS1-201ENST00000332345 H3BSA7 217 aa12.02□□□□□ -0.49
LIMS1-201ENST00000332345 H7C1Q1 480 aa12.02□□□□□ -0.49
LIMS1-201ENST00000332345 SURF4O15260 269 aa12.02□□□□□ -0.49
LIMS1-201ENST00000332345 CLPTM1O96005 669 aa12.02□□□□□ -0.49
LIMS1-201ENST00000332345 NGFP01138 241 aa12.02□□□□□ -0.49
LIMS1-201ENST00000332345 IGHV3-13P01766 116 aa12.02□□□□□ -0.49
LIMS1-201ENST00000332345 MT-ND5P03915 603 aa12.02□□□□□ -0.49
LIMS1-201ENST00000332345 GYPBP06028 91 aa12.02□□□□□ -0.49
LIMS1-201ENST00000332345 INHBBP09529 407 aa12.02□□□□□ -0.49
LIMS1-201ENST00000332345 PRR23D2P0DMB1 279 aaPredicted RBP12.02□□□□□ -0.49
LIMS1-201ENST00000332345 RGS6P49758 472 aa12.02□□□□□ -0.49
LIMS1-201ENST00000332345 ERVS71-1P61550 626 aa12.02□□□□□ -0.49
LIMS1-201ENST00000332345 MBNL2Q5VZF2 373 aaKnown RBP12.02□□□□□ -0.49
LIMS1-201ENST00000332345 KDM4DQ6B0I6 523 aa12.02□□□□□ -0.49
LIMS1-201ENST00000332345 TMEM154Q6P9G4 183 aa12.02□□□□□ -0.49
LIMS1-201ENST00000332345 DNM1P46Q6ZS02 220 aa12.02□□□□□ -0.49
LIMS1-201ENST00000332345 LINC00346Q8IVM7 164 aa12.02□□□□□ -0.49
LIMS1-201ENST00000332345 ZCCHC24Q8N2G6 241 aaKnown RBP12.02□□□□□ -0.49
LIMS1-201ENST00000332345 OR5L1Q8NGL2 311 aa12.02□□□□□ -0.49
LIMS1-201ENST00000332345 OR6K6Q8NGW6 343 aa12.02□□□□□ -0.49
LIMS1-201ENST00000332345 SLC25A40Q8TBP6 338 aa12.02□□□□□ -0.49
LIMS1-201ENST00000332345 SNX33Q8WV41 574 aa12.02□□□□□ -0.49
LIMS1-201ENST00000332345 ZNRF4Q8WWF5 429 aa12.02□□□□□ -0.49
LIMS1-201ENST00000332345 FAM168AQ92567 244 aa12.02□□□□□ -0.49
LIMS1-201ENST00000332345 MARS2Q96GW9 593 aaKnown RBP12.02□□□□□ -0.49
LIMS1-201ENST00000332345 OSBPL10Q9BXB5 764 aa12.02□□□□□ -0.49
LIMS1-201ENST00000332345 PRRG3Q9BZD7 231 aa12.02□□□□□ -0.49
LIMS1-201ENST00000332345 OR2J1Q9GZK6 312 aa12.02□□□□□ -0.49
LIMS1-201ENST00000332345 SEMA6AQ9H2E6 1030 aa12.02□□□□□ -0.49
LIMS1-201ENST00000332345 SLC25A19Q9HC21 320 aa12.02□□□□□ -0.49
LIMS1-201ENST00000332345 CHD3Q12873 2000 aaKnown RBP12.01□□□□□ -0.49
LIMS1-201ENST00000332345 FAM183AA6NL82 134 aa12.01□□□□□ -0.49
LIMS1-201ENST00000332345 J3QW42 95 aa12.01□□□□□ -0.49
LIMS1-201ENST00000332345 ZNF593O00488 134 aaPredicted RBP12.01□□□□□ -0.49
LIMS1-201ENST00000332345 CLUP10909 449 aa12.01□□□□□ -0.49
LIMS1-201ENST00000332345 LIPAP38571 399 aa12.01□□□□□ -0.49
LIMS1-201ENST00000332345 ALDH3B1P43353 468 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms