RNA–Protein interactions for RNA: ENST00000330943.8

SNX20-202, Transcript of sorting nexin 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX20, Length 2,904 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-202ENST00000330943 CD79AP11912 226 aa12.99□□□□□ -0.33
SNX20-202ENST00000330943 HLA-GP17693 338 aa12.99□□□□□ -0.33
SNX20-202ENST00000330943 PSMB6P28072 239 aa12.99□□□□□ -0.33
SNX20-202ENST00000330943 HSPB2Q16082 182 aa12.99□□□□□ -0.33
SNX20-202ENST00000330943 POMZP3Q6PJE2 187 aa12.99□□□□□ -0.33
SNX20-202ENST00000330943 TRAPPC6BQ86SZ2 158 aa12.99□□□□□ -0.33
SNX20-202ENST00000330943 ZNF761Q86XN6 746 aaPredicted RBP12.99□□□□□ -0.33
SNX20-202ENST00000330943 ZNF679Q8IYX0 411 aa12.99□□□□□ -0.33
SNX20-202ENST00000330943 STOML3Q8TAV4 291 aa12.99□□□□□ -0.33
SNX20-202ENST00000330943 PRMT8Q9NR22 394 aaPredicted RBP12.99□□□□□ -0.33
SNX20-202ENST00000330943 SLC22A11Q9NSA0 550 aa12.99□□□□□ -0.33
SNX20-202ENST00000330943 UQCC1Q9NVA1 299 aa12.99□□□□□ -0.33
SNX20-202ENST00000330943 EIF3GO75821 320 aaKnown RBP eCLIP12.99□□□□□ -0.33
SNX20-202ENST00000330943 STK17BO94768 372 aa12.99□□□□□ -0.33
SNX20-202ENST00000330943 APBB3O95704 486 aa12.99□□□□□ -0.33
SNX20-202ENST00000330943 PLGP00747 810 aaPredicted RBP12.99□□□□□ -0.33
SNX20-202ENST00000330943 CTSBP07858 339 aa12.99□□□□□ -0.33
SNX20-202ENST00000330943 ERCC1P07992 297 aaPredicted RBP12.99□□□□□ -0.33
SNX20-202ENST00000330943 GUSBP08236 651 aa12.99□□□□□ -0.33
SNX20-202ENST00000330943 SEC13P55735 322 aa12.99□□□□□ -0.33
SNX20-202ENST00000330943 EIF2B1Q14232 305 aaKnown RBP12.99□□□□□ -0.33
SNX20-202ENST00000330943 ALG11Q2TAA5 492 aa12.99□□□□□ -0.33
SNX20-202ENST00000330943 EMC4Q5J8M3 183 aa12.99□□□□□ -0.33
SNX20-202ENST00000330943 TMEM31Q5JXX7 168 aa12.99□□□□□ -0.33
SNX20-202ENST00000330943 FDX2Q6P4F2 183 aa12.99□□□□□ -0.33
SNX20-202ENST00000330943 MDGA2Q7Z553 956 aa12.99□□□□□ -0.33
SNX20-202ENST00000330943 FJX1Q86VR8 437 aa12.99□□□□□ -0.33
SNX20-202ENST00000330943 C16orf52Q8NHV5 167 aa12.99□□□□□ -0.33
SNX20-202ENST00000330943 CMBLQ96DG6 245 aa12.99□□□□□ -0.33
SNX20-202ENST00000330943 SCARF2Q96GP6 870 aaPredicted RBP12.99□□□□□ -0.33
SNX20-202ENST00000330943 ASB16Q96NS5 453 aa12.99□□□□□ -0.33
SNX20-202ENST00000330943 RPP25Q9BUL9 199 aaKnown RBP12.99□□□□□ -0.33
SNX20-202ENST00000330943 NUDT9Q9BW91 350 aa12.99□□□□□ -0.33
SNX20-202ENST00000330943 SEC11CQ9BY50 192 aa12.99□□□□□ -0.33
SNX20-202ENST00000330943 B9D1Q9UPM9 204 aa12.99□□□□□ -0.33
SNX20-202ENST00000330943 CACNA1IQ9P0X4 2223 aa12.98□□□□□ -0.33
SNX20-202ENST00000330943 ARPC4-TTLL3A0A0A6YYG9 625 aa12.98□□□□□ -0.33
SNX20-202ENST00000330943 TTLL8A6PVC2 850 aa12.98□□□□□ -0.33
SNX20-202ENST00000330943 IL2RAP01589 272 aa12.98□□□□□ -0.33
SNX20-202ENST00000330943 CRHP06850 196 aa12.98□□□□□ -0.33
SNX20-202ENST00000330943 HPGDP15428 266 aa12.98□□□□□ -0.33
SNX20-202ENST00000330943 GJA4P35212 333 aa12.98□□□□□ -0.33
SNX20-202ENST00000330943 PPICP45877 212 aa12.98□□□□□ -0.33
SNX20-202ENST00000330943 NR0B1P51843 470 aaKnown RBP12.98□□□□□ -0.33
SNX20-202ENST00000330943 ERV3-1Q14264 604 aa12.98□□□□□ -0.33
SNX20-202ENST00000330943 KLHL26Q53HC5 615 aa12.98□□□□□ -0.33
SNX20-202ENST00000330943 TMPPEQ6ZT21 453 aa12.98□□□□□ -0.33
SNX20-202ENST00000330943 BAHD1Q8TBE0 780 aaPredicted RBP12.98□□□□□ -0.33
SNX20-202ENST00000330943 RNF128Q8TEB7 428 aa12.98□□□□□ -0.33
SNX20-202ENST00000330943 LIPHQ8WWY8 451 aa12.98□□□□□ -0.33
SNX20-202ENST00000330943 PATE1Q8WXA2 126 aa12.98□□□□□ -0.33
SNX20-202ENST00000330943 ZNF524Q96C55 264 aa12.98□□□□□ -0.33
SNX20-202ENST00000330943 MMP26Q9NRE1 261 aa12.98□□□□□ -0.33
SNX20-202ENST00000330943 TMEM100Q9NV29 134 aa12.98□□□□□ -0.33
SNX20-202ENST00000330943 ARHGEF17Q96PE2 2063 aaPredicted RBP12.98□□□□□ -0.33
SNX20-202ENST00000330943 F8VVB4 439 aa12.98□□□□□ -0.33
SNX20-202ENST00000330943 F8VWA3 439 aa12.98□□□□□ -0.33
SNX20-202ENST00000330943 OR6A2O95222 327 aa12.98□□□□□ -0.33
SNX20-202ENST00000330943 IFNA4P05014 189 aa12.98□□□□□ -0.33
SNX20-202ENST00000330943 ABOP16442 354 aa12.98□□□□□ -0.33
SNX20-202ENST00000330943 SERPINF1P36955 418 aa12.98□□□□□ -0.33
SNX20-202ENST00000330943 TAF8Q7Z7C8 310 aa12.98□□□□□ -0.33
SNX20-202ENST00000330943 SLC30A7Q8NEW0 376 aa12.98□□□□□ -0.33
SNX20-202ENST00000330943 NANPQ8TBE9 248 aa12.98□□□□□ -0.33
SNX20-202ENST00000330943 RSC1A1Q92681 617 aa12.98□□□□□ -0.33
SNX20-202ENST00000330943 TAAR8Q969N4 342 aa12.98□□□□□ -0.33
SNX20-202ENST00000330943 KLHDC3Q9BQ90 382 aa12.98□□□□□ -0.33
SNX20-202ENST00000330943 TRIOBPQ9H2D6 2365 aa12.97□□□□□ -0.33
SNX20-202ENST00000330943 TEX13DA0A0J9YY54 714 aaPredicted RBP12.97□□□□□ -0.33
SNX20-202ENST00000330943 EIF1AYO14602 144 aaKnown RBP12.97□□□□□ -0.33
SNX20-202ENST00000330943 XKRYO14609 159 aa12.97□□□□□ -0.33
SNX20-202ENST00000330943 ACAA1P09110 424 aaPredicted RBP12.97□□□□□ -0.33
SNX20-202ENST00000330943 EIF1AXP47813 144 aaKnown RBP12.97□□□□□ -0.33
SNX20-202ENST00000330943 DNASE1L1P49184 302 aa12.97□□□□□ -0.33
SNX20-202ENST00000330943 GFOD2Q3B7J2 385 aa12.97□□□□□ -0.33
SNX20-202ENST00000330943 RTL10Q7L3V2 364 aa12.97□□□□□ -0.33
SNX20-202ENST00000330943 ZNF440Q8IYI8 595 aa12.97□□□□□ -0.33
SNX20-202ENST00000330943 PAQR4Q8N4S7 273 aaPredicted RBP12.97□□□□□ -0.33
SNX20-202ENST00000330943 ZSCAN1Q8NBB4 408 aa12.97□□□□□ -0.33
SNX20-202ENST00000330943 CHST4Q8NCG5 386 aa12.97□□□□□ -0.33
SNX20-202ENST00000330943 NUDCD2Q8WVJ2 157 aa12.97□□□□□ -0.33
SNX20-202ENST00000330943 RRNAD1Q96FB5 475 aaKnown RBP12.97□□□□□ -0.33
SNX20-202ENST00000330943 MICU1Q9BPX6 476 aa12.97□□□□□ -0.33
SNX20-202ENST00000330943 HRH4Q9H3N8 390 aa12.97□□□□□ -0.33
SNX20-202ENST00000330943 SLC2A8Q9NY64 477 aa12.97□□□□□ -0.33
SNX20-202ENST00000330943 ZNF107Q9UII5 783 aaPredicted RBP12.97□□□□□ -0.33
SNX20-202ENST00000330943 HRH1P35367 487 aa12.97□□□□□ -0.33
SNX20-202ENST00000330943 PPP1CAP62136 330 aa12.97□□□□□ -0.33
SNX20-202ENST00000330943 TEX30Q5JUR7 227 aa12.97□□□□□ -0.33
SNX20-202ENST00000330943 SLC18B1Q6NT16 456 aa12.97□□□□□ -0.33
SNX20-202ENST00000330943 ZDHHC22Q8N966 263 aa12.97□□□□□ -0.33
SNX20-202ENST00000330943 OR13C3Q8NGS6 347 aa12.97□□□□□ -0.33
SNX20-202ENST00000330943 ZNF563Q8TA94 476 aa12.97□□□□□ -0.33
SNX20-202ENST00000330943 A0A0A6YYC8 382 aaPredicted RBP12.96□□□□□ -0.33
SNX20-202ENST00000330943 LINC00587B1AMM8 73 aa12.96□□□□□ -0.33
SNX20-202ENST00000330943 I3L1I5 382 aaPredicted RBP12.96□□□□□ -0.33
SNX20-202ENST00000330943 IGFBP3P17936 291 aaPredicted RBP12.96□□□□□ -0.33
SNX20-202ENST00000330943 GDI1P31150 447 aa12.96□□□□□ -0.33
SNX20-202ENST00000330943 PTGFRP43088 359 aa12.96□□□□□ -0.33
SNX20-202ENST00000330943 SNRPEP62304 92 aaKnown RBP12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms