RNA–Protein interactions for RNA: ENST00000328560.12

ATP2C1-201, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,484 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-201ENST00000328560 GSG1LQ6UXU4 331 aa12.58□□□□□ -0.4
ATP2C1-201ENST00000328560 C12orf45Q8N5I9 185 aaPredicted RBP12.58□□□□□ -0.4
ATP2C1-201ENST00000328560 RELL2Q8NC24 303 aaPredicted RBP12.58□□□□□ -0.4
ATP2C1-201ENST00000328560 OR10H5Q8NGA6 315 aa12.58□□□□□ -0.4
ATP2C1-201ENST00000328560 OR4D6Q8NGJ1 314 aa12.58□□□□□ -0.4
ATP2C1-201ENST00000328560 THRSPQ92748 146 aa12.58□□□□□ -0.4
ATP2C1-201ENST00000328560 LINC00052Q96N35 136 aa12.58□□□□□ -0.4
ATP2C1-201ENST00000328560 PRMT8Q9NR22 394 aaPredicted RBP12.58□□□□□ -0.4
ATP2C1-201ENST00000328560 A0A1B0GX78 115 aa12.57□□□□□ -0.4
ATP2C1-201ENST00000328560 LPLP06858 475 aa12.57□□□□□ -0.4
ATP2C1-201ENST00000328560 RNF4P78317 190 aa12.57□□□□□ -0.4
ATP2C1-201ENST00000328560 OR1J2Q8NGS2 313 aa12.57□□□□□ -0.4
ATP2C1-201ENST00000328560 MICU1Q9BPX6 476 aa12.57□□□□□ -0.4
ATP2C1-201ENST00000328560 UTP23Q9BRU9 249 aaKnown RBP12.57□□□□□ -0.4
ATP2C1-201ENST00000328560 VSX1Q9NZR4 365 aaPredicted RBP12.57□□□□□ -0.4
ATP2C1-201ENST00000328560 NUP50Q9UKX7 468 aa12.57□□□□□ -0.4
ATP2C1-201ENST00000328560 R4GMQ9 66 aa12.57□□□□□ -0.4
ATP2C1-201ENST00000328560 FADS1O60427 444 aa12.57□□□□□ -0.4
ATP2C1-201ENST00000328560 NPIPB7O75200 414 aa12.57□□□□□ -0.4
ATP2C1-201ENST00000328560 PPP3CBP16298 524 aa12.57□□□□□ -0.4
ATP2C1-201ENST00000328560 PRKXP51817 358 aa12.57□□□□□ -0.4
ATP2C1-201ENST00000328560 AFF3P51826 1226 aaKnown RBP12.57□□□□□ -0.4
ATP2C1-201ENST00000328560 MAP2K6P52564 334 aa12.57□□□□□ -0.4
ATP2C1-201ENST00000328560 ROM1Q03395 351 aa12.57□□□□□ -0.4
ATP2C1-201ENST00000328560 GFOD2Q3B7J2 385 aa12.57□□□□□ -0.4
ATP2C1-201ENST00000328560 CARD17Q5XLA6 110 aa12.57□□□□□ -0.4
ATP2C1-201ENST00000328560 GPAT4Q86UL3 456 aa12.57□□□□□ -0.4
ATP2C1-201ENST00000328560 ZNF584Q8IVC4 421 aa12.57□□□□□ -0.4
ATP2C1-201ENST00000328560 BEST3Q8N1M1 668 aa12.57□□□□□ -0.4
ATP2C1-201ENST00000328560 OR6M1Q8NGM8 313 aa12.57□□□□□ -0.4
ATP2C1-201ENST00000328560 TMEM234Q8WY98 164 aa12.57□□□□□ -0.4
ATP2C1-201ENST00000328560 UPB1Q9UBR1 384 aa12.57□□□□□ -0.4
ATP2C1-201ENST00000328560 AUP1Q9Y679 476 aa12.57□□□□□ -0.4
ATP2C1-201ENST00000328560 NUPL2O15504 423 aaKnown RBP12.57□□□□□ -0.4
ATP2C1-201ENST00000328560 SLC2A1P11166 492 aa12.57□□□□□ -0.4
ATP2C1-201ENST00000328560 CXADRP78310 365 aa12.57□□□□□ -0.4
ATP2C1-201ENST00000328560 TAF13Q15543 124 aa12.57□□□□□ -0.4
ATP2C1-201ENST00000328560 SLC22A6Q4U2R8 563 aa12.57□□□□□ -0.4
ATP2C1-201ENST00000328560 OR52W1Q6IF63 320 aa12.57□□□□□ -0.4
ATP2C1-201ENST00000328560 FDX2Q6P4F2 183 aa12.57□□□□□ -0.4
ATP2C1-201ENST00000328560 ADGRE4PQ86SQ3 457 aa12.57□□□□□ -0.4
ATP2C1-201ENST00000328560 GVQW1Q8N7I0 195 aa12.57□□□□□ -0.4
ATP2C1-201ENST00000328560 STEAP2Q8NFT2 490 aa12.57□□□□□ -0.4
ATP2C1-201ENST00000328560 STT3BQ8TCJ2 826 aa12.57□□□□□ -0.4
ATP2C1-201ENST00000328560 CASTOR1Q8WTX7 329 aa12.57□□□□□ -0.4
ATP2C1-201ENST00000328560 CCDC107Q8WV48 283 aa12.57□□□□□ -0.4
ATP2C1-201ENST00000328560 KLRF1Q9NZS2 232 aa12.57□□□□□ -0.4
ATP2C1-201ENST00000328560 PLEKHA6Q9Y2H5 1048 aa12.57□□□□□ -0.4
ATP2C1-201ENST00000328560 A0A1W2PQD3 144 aa12.56□□□□□ -0.4
ATP2C1-201ENST00000328560 C10orf142B7Z368 130 aa12.56□□□□□ -0.4
ATP2C1-201ENST00000328560 NUDT21O43809 227 aaKnown RBP12.56□□□□□ -0.4
ATP2C1-201ENST00000328560 GLB1P16278 677 aa12.56□□□□□ -0.4
ATP2C1-201ENST00000328560 BIDP55957 195 aa12.56□□□□□ -0.4
ATP2C1-201ENST00000328560 SCAND1P57086 179 aa12.56□□□□□ -0.4
ATP2C1-201ENST00000328560 SLC26A10Q8NG04 563 aa12.56□□□□□ -0.4
ATP2C1-201ENST00000328560 SLC25A28Q96A46 364 aa12.56□□□□□ -0.4
ATP2C1-201ENST00000328560 PFDN2Q9UHV9 154 aa12.56□□□□□ -0.4
ATP2C1-201ENST00000328560 TMEM131Q92545 1883 aa12.56□□□□□ -0.4
ATP2C1-201ENST00000328560 TEX51A0A1B0GUA7 166 aa12.56□□□□□ -0.4
ATP2C1-201ENST00000328560 HSPB2A8KAH6 182 aa12.56□□□□□ -0.4
ATP2C1-201ENST00000328560 MS4A18H0YCH9 400 aa12.56□□□□□ -0.4
ATP2C1-201ENST00000328560 NMBP08949 121 aa12.56□□□□□ -0.4
ATP2C1-201ENST00000328560 BTN1A1Q13410 526 aa12.56□□□□□ -0.4
ATP2C1-201ENST00000328560 MFSD13AQ14CX5 517 aa12.56□□□□□ -0.4
ATP2C1-201ENST00000328560 ZMYND11Q15326 602 aa12.56□□□□□ -0.4
ATP2C1-201ENST00000328560 NR0B2Q15466 257 aa12.56□□□□□ -0.4
ATP2C1-201ENST00000328560 HSPB2Q16082 182 aa12.56□□□□□ -0.4
ATP2C1-201ENST00000328560 MS4A18Q3C1V0 323 aa12.56□□□□□ -0.4
ATP2C1-201ENST00000328560 DNM1P46Q6ZS02 220 aa12.56□□□□□ -0.4
ATP2C1-201ENST00000328560 OR13C9Q8NGT0 318 aa12.56□□□□□ -0.4
ATP2C1-201ENST00000328560 NUDCD2Q8WVJ2 157 aa12.56□□□□□ -0.4
ATP2C1-201ENST00000328560 SESN1Q9Y6P5 492 aa12.56□□□□□ -0.4
ATP2C1-201ENST00000328560 HSF1Q00613 529 aa12.56□□□□□ -0.4
ATP2C1-201ENST00000328560 GK2Q14410 553 aaPredicted RBP12.56□□□□□ -0.4
ATP2C1-201ENST00000328560 C3orf33Q6P1S2 294 aa12.56□□□□□ -0.4
ATP2C1-201ENST00000328560 DNM1P34Q6PK57 102 aa12.56□□□□□ -0.4
ATP2C1-201ENST00000328560 ZNF546Q86UE3 836 aa12.56□□□□□ -0.4
ATP2C1-201ENST00000328560 SLC6A7Q99884 636 aa12.56□□□□□ -0.4
ATP2C1-201ENST00000328560 PCED1AQ9H1Q7 454 aa12.56□□□□□ -0.4
ATP2C1-201ENST00000328560 H3BMH7 237 aa12.55□□□□□ -0.4
ATP2C1-201ENST00000328560 HLA-AP01891 365 aaKnown RBP12.55□□□□□ -0.4
ATP2C1-201ENST00000328560 GABRA1P14867 456 aa12.55□□□□□ -0.4
ATP2C1-201ENST00000328560 ATF4P18848 351 aaPredicted RBP12.55□□□□□ -0.4
ATP2C1-201ENST00000328560 VAMP1P23763 118 aa12.55□□□□□ -0.4
ATP2C1-201ENST00000328560 NUP62P37198 522 aaPredicted RBP12.55□□□□□ -0.4
ATP2C1-201ENST00000328560 FOXF1Q12946 379 aa12.55□□□□□ -0.4
ATP2C1-201ENST00000328560 FAM74A1Q5RGS3 127 aa12.55□□□□□ -0.4
ATP2C1-201ENST00000328560 OGFOD3Q6PK18 319 aa12.55□□□□□ -0.4
ATP2C1-201ENST00000328560 KLHL24Q6TFL4 600 aa12.55□□□□□ -0.4
ATP2C1-201ENST00000328560 H1FNTQ75WM6 255 aaPredicted RBP12.55□□□□□ -0.4
ATP2C1-201ENST00000328560 ZNF454Q8N9F8 522 aa12.55□□□□□ -0.4
ATP2C1-201ENST00000328560 MS4A7Q9GZW8 240 aaPredicted RBP12.55□□□□□ -0.4
ATP2C1-201ENST00000328560 CNTD2Q9H8S5 307 aa12.55□□□□□ -0.4
ATP2C1-201ENST00000328560 KLK13Q9UKR3 277 aa12.55□□□□□ -0.4
ATP2C1-201ENST00000328560 SYT7O43581 403 aa12.55□□□□□ -0.4
ATP2C1-201ENST00000328560 ACHEP22303 614 aa12.55□□□□□ -0.4
ATP2C1-201ENST00000328560 MECP2P51608 486 aaKnown RBP12.55□□□□□ -0.4
ATP2C1-201ENST00000328560 INPP5JQ15735 1006 aaPredicted RBP12.55□□□□□ -0.4
ATP2C1-201ENST00000328560 RNASE10Q5GAN6 216 aaKnown RBP12.55□□□□□ -0.4
ATP2C1-201ENST00000328560 FAM69BQ5VUD6 431 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms