RNA–Protein interactions for RNA: ENST00000328300.10

COL4A5-201, Transcript of collagen type IV alpha 5 chain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene COL4A5, Length 6,483 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-201ENST00000328300 TMEM99Q8N816 258 aa10.34□□□□□ -0.75
COL4A5-201ENST00000328300 SGK3Q96BR1 496 aa10.34□□□□□ -0.75
COL4A5-201ENST00000328300 GON7Q9BXV9 100 aa10.34□□□□□ -0.75
COL4A5-201ENST00000328300 ACOXLQ9NUZ1 547 aa10.34□□□□□ -0.75
COL4A5-201ENST00000328300 CNR1P21554 472 aa10.34□□□□□ -0.75
COL4A5-201ENST00000328300 SLC14A1Q13336 389 aa10.34□□□□□ -0.75
COL4A5-201ENST00000328300 OLIG3Q7RTU3 272 aa10.34□□□□□ -0.75
COL4A5-201ENST00000328300 OR6S1Q8NH40 331 aa10.34□□□□□ -0.75
COL4A5-201ENST00000328300 PP6455Q8WZ26 134 aa10.34□□□□□ -0.75
COL4A5-201ENST00000328300 APOBEC3DQ96AK3 386 aaPredicted RBP10.34□□□□□ -0.75
COL4A5-201ENST00000328300 ZFP64Q9NPA5 681 aa10.34□□□□□ -0.75
COL4A5-201ENST00000328300 ANKRD10Q9NXR5 420 aa10.34□□□□□ -0.75
COL4A5-201ENST00000328300 GNG12Q9UBI6 72 aa10.34□□□□□ -0.75
COL4A5-201ENST00000328300 GP1BAP07359 652 aa10.34□□□□□ -0.75
COL4A5-201ENST00000328300 POU4F3Q15319 338 aa10.34□□□□□ -0.75
COL4A5-201ENST00000328300 ZNF766Q5HY98 468 aa10.34□□□□□ -0.75
COL4A5-201ENST00000328300 ARHGEF39Q8N4T4 335 aa10.34□□□□□ -0.75
COL4A5-201ENST00000328300 PRR14Q9BWN1 585 aa10.34□□□□□ -0.75
COL4A5-201ENST00000328300 SH3BGRL2Q9UJC5 107 aa10.34□□□□□ -0.75
COL4A5-201ENST00000328300 FBXL4Q9UKA2 621 aa10.34□□□□□ -0.75
COL4A5-201ENST00000328300 TRGV5A0A0B4J1U4 118 aa10.34□□□□□ -0.75
COL4A5-201ENST00000328300 TSPAN15O95858 294 aa10.34□□□□□ -0.75
COL4A5-201ENST00000328300 NKG7Q16617 165 aa10.34□□□□□ -0.75
COL4A5-201ENST00000328300 PAN3Q58A45 887 aaKnown RBP10.34□□□□□ -0.75
COL4A5-201ENST00000328300 PMS2CLQ68D20 193 aa10.34□□□□□ -0.75
COL4A5-201ENST00000328300 GDF15Q99988 308 aa10.34□□□□□ -0.75
COL4A5-201ENST00000328300 OR51B6Q9H340 312 aa10.34□□□□□ -0.75
COL4A5-201ENST00000328300 SLC17A5Q9NRA2 495 aa10.34□□□□□ -0.75
COL4A5-201ENST00000328300 ASH2LQ9UBL3 628 aa10.34□□□□□ -0.75
COL4A5-201ENST00000328300 TNFSF12-TNFSF13A0A0A6YY99 330 aa10.34□□□□□ -0.75
COL4A5-201ENST00000328300 DNPH1O43598 174 aa10.34□□□□□ -0.75
COL4A5-201ENST00000328300 ZNF718Q3SXZ3 478 aa10.34□□□□□ -0.75
COL4A5-201ENST00000328300 IL1F10Q8WWZ1 152 aa10.34□□□□□ -0.75
COL4A5-201ENST00000328300 ZNF436Q9C0F3 470 aaPredicted RBP10.34□□□□□ -0.75
COL4A5-201ENST00000328300 C12orf49Q9H741 205 aa10.34□□□□□ -0.75
COL4A5-201ENST00000328300 MYEF2Q9P2K5 600 aaKnown RBP10.34□□□□□ -0.75
COL4A5-201ENST00000328300 ASPDHA6ND91 283 aa10.33□□□□□ -0.76
COL4A5-201ENST00000328300 PCBP3P57721 371 aaKnown RBP10.33□□□□□ -0.76
COL4A5-201ENST00000328300 RAC1P63000 192 aa10.33□□□□□ -0.76
COL4A5-201ENST00000328300 ZNF117Q03924 483 aa10.33□□□□□ -0.76
COL4A5-201ENST00000328300 SPEM2Q0P670 501 aa10.33□□□□□ -0.76
COL4A5-201ENST00000328300 FAPQ12884 760 aa10.33□□□□□ -0.76
COL4A5-201ENST00000328300 AADACL3Q5VUY0 350 aa10.33□□□□□ -0.76
COL4A5-201ENST00000328300 LYPD4Q6UWN0 246 aa10.33□□□□□ -0.76
COL4A5-201ENST00000328300 TFAP2EQ6VUC0 442 aa10.33□□□□□ -0.76
COL4A5-201ENST00000328300 EMG1Q92979 244 aaKnown RBP10.33□□□□□ -0.76
COL4A5-201ENST00000328300 C3orf49Q96BT1 292 aa10.33□□□□□ -0.76
COL4A5-201ENST00000328300 RNF170Q96K19 258 aa10.33□□□□□ -0.76
COL4A5-201ENST00000328300 DCLRE1CQ96SD1 692 aaKnown RBP10.33□□□□□ -0.76
COL4A5-201ENST00000328300 SF3B5Q9BWJ5 86 aaKnown RBP10.33□□□□□ -0.76
COL4A5-201ENST00000328300 SLC5A6Q9Y289 635 aa10.33□□□□□ -0.76
COL4A5-201ENST00000328300 NTNG1Q9Y2I2 539 aa10.33□□□□□ -0.76
COL4A5-201ENST00000328300 DEGS1O15121 323 aa10.33□□□□□ -0.76
COL4A5-201ENST00000328300 SSX4O60224 188 aa10.33□□□□□ -0.76
COL4A5-201ENST00000328300 ZNF354AO60765 605 aaPredicted RBP10.33□□□□□ -0.76
COL4A5-201ENST00000328300 WISP3O95389 354 aaPredicted RBP10.33□□□□□ -0.76
COL4A5-201ENST00000328300 RRAS2P62070 204 aaPredicted RBP10.33□□□□□ -0.76
COL4A5-201ENST00000328300 ACER2Q5QJU3 275 aa10.33□□□□□ -0.76
COL4A5-201ENST00000328300 PAQR6Q6TCH4 344 aa10.33□□□□□ -0.76
COL4A5-201ENST00000328300 ANGPTL5Q86XS5 388 aa10.33□□□□□ -0.76
COL4A5-201ENST00000328300 RPL3LQ92901 407 aaKnown RBP10.33□□□□□ -0.76
COL4A5-201ENST00000328300 FBXO8Q9NRD0 319 aa10.33□□□□□ -0.76
COL4A5-201ENST00000328300 SH2D1BO14796 132 aa10.33□□□□□ -0.76
COL4A5-201ENST00000328300 RPS2P15880 293 aaKnown RBP10.33□□□□□ -0.76
COL4A5-201ENST00000328300 SRP9P49458 86 aaKnown RBP10.33□□□□□ -0.76
COL4A5-201ENST00000328300 Q8IYB0 196 aa10.33□□□□□ -0.76
COL4A5-201ENST00000328300 BEST4Q8NFU0 473 aa10.33□□□□□ -0.76
COL4A5-201ENST00000328300 EMC7Q9NPA0 242 aa10.33□□□□□ -0.76
COL4A5-201ENST00000328300 LHX9Q9NQ69 397 aa10.33□□□□□ -0.76
COL4A5-201ENST00000328300 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.33□□□□□ -0.76
COL4A5-201ENST00000328300 TERTO14746 1132 aaKnown RBP10.33□□□□□ -0.76
COL4A5-201ENST00000328300 HBG1P69891 147 aa10.33□□□□□ -0.76
COL4A5-201ENST00000328300 HBG2P69892 147 aa10.33□□□□□ -0.76
COL4A5-201ENST00000328300 CDK5Q00535 292 aa10.33□□□□□ -0.76
COL4A5-201ENST00000328300 MEX3BQ6ZN04 569 aaKnown RBP10.33□□□□□ -0.76
COL4A5-201ENST00000328300 SYT9Q86SS6 491 aa10.33□□□□□ -0.76
COL4A5-201ENST00000328300 LGI3Q8N145 548 aa10.33□□□□□ -0.76
COL4A5-201ENST00000328300 FAM109AQ8N4B1 249 aa10.33□□□□□ -0.76
COL4A5-201ENST00000328300 SARGQ9BW04 601 aa10.33□□□□□ -0.76
COL4A5-201ENST00000328300 OR11A1Q9GZK7 315 aa10.33□□□□□ -0.76
COL4A5-201ENST00000328300 UCNP55089 124 aa10.33□□□□□ -0.76
COL4A5-201ENST00000328300 PNLIPRP3Q17RR3 467 aa10.33□□□□□ -0.76
COL4A5-201ENST00000328300 NUFIP2Q7Z417 695 aaKnown RBP10.33□□□□□ -0.76
COL4A5-201ENST00000328300 LAX1Q8IWV1 398 aa10.33□□□□□ -0.76
COL4A5-201ENST00000328300 MSRB3Q8IXL7 192 aa10.33□□□□□ -0.76
COL4A5-201ENST00000328300 RDH10Q8IZV5 341 aa10.33□□□□□ -0.76
COL4A5-201ENST00000328300 USB1Q9BQ65 265 aaKnown RBP10.33□□□□□ -0.76
COL4A5-201ENST00000328300 PBOV1Q9GZY1 135 aa10.33□□□□□ -0.76
COL4A5-201ENST00000328300 CLEC1BQ9P126 229 aa10.33□□□□□ -0.76
COL4A5-201ENST00000328300 ANKRD61A6NGH8 418 aa10.32□□□□□ -0.76
COL4A5-201ENST00000328300 SMIM18P0DKX4 95 aa10.32□□□□□ -0.76
COL4A5-201ENST00000328300 ISXQ2M1V0 245 aa10.32□□□□□ -0.76
COL4A5-201ENST00000328300 TMEM81Q6P7N7 255 aa10.32□□□□□ -0.76
COL4A5-201ENST00000328300 GDPD3Q7L5L3 318 aa10.32□□□□□ -0.76
COL4A5-201ENST00000328300 PRR18Q8N4B5 295 aa10.32□□□□□ -0.76
COL4A5-201ENST00000328300 OR6K3Q8NGY3 331 aa10.32□□□□□ -0.76
COL4A5-201ENST00000328300 TAAR8Q969N4 342 aa10.32□□□□□ -0.76
COL4A5-201ENST00000328300 ZNF775Q96BV0 537 aaPredicted RBP10.32□□□□□ -0.76
COL4A5-201ENST00000328300 PLEKHF2Q9H8W4 249 aa10.32□□□□□ -0.76
COL4A5-201ENST00000328300 CLEC2DQ9UHP7 191 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms