RNA–Protein interactions for RNA: ENST00000326828.5

CHRNA3-201, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA3, Length 3,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-201ENST00000326828 CD8AP01732 235 aa12.86□□□□□ -0.35
CHRNA3-201ENST00000326828 MUC1P15941 1255 aaPredicted RBP12.86□□□□□ -0.35
CHRNA3-201ENST00000326828 CSRP1P21291 193 aaKnown RBP12.86□□□□□ -0.35
CHRNA3-201ENST00000326828 GDI1P31150 447 aa12.86□□□□□ -0.35
CHRNA3-201ENST00000326828 OR4D6Q8NGJ1 314 aa12.86□□□□□ -0.35
CHRNA3-201ENST00000326828 NT5CQ8TCD5 201 aa12.86□□□□□ -0.35
CHRNA3-201ENST00000326828 PIK3IP1Q96FE7 263 aa12.86□□□□□ -0.35
CHRNA3-201ENST00000326828 SLC17A4Q9Y2C5 497 aa12.86□□□□□ -0.35
CHRNA3-201ENST00000326828 A0A1B0GTI1 187 aa12.86□□□□□ -0.35
CHRNA3-201ENST00000326828 ZNF735P0CB33 412 aa12.86□□□□□ -0.35
CHRNA3-201ENST00000326828 PSMB6P28072 239 aa12.86□□□□□ -0.35
CHRNA3-201ENST00000326828 TACR3P29371 465 aa12.86□□□□□ -0.35
CHRNA3-201ENST00000326828 RORAP35398 523 aa12.86□□□□□ -0.35
CHRNA3-201ENST00000326828 DMWDQ09019 674 aa12.86□□□□□ -0.35
CHRNA3-201ENST00000326828 EBPQ15125 230 aaKnown RBP12.86□□□□□ -0.35
CHRNA3-201ENST00000326828 TMEM229BQ8NBD8 167 aa12.86□□□□□ -0.35
CHRNA3-201ENST00000326828 TAAR8Q969N4 342 aa12.86□□□□□ -0.35
CHRNA3-201ENST00000326828 GAL3ST4Q96RP7 486 aa12.86□□□□□ -0.35
CHRNA3-201ENST00000326828 C1orf198Q9H425 327 aa12.86□□□□□ -0.35
CHRNA3-201ENST00000326828 MMP25Q9NPA2 562 aa12.86□□□□□ -0.35
CHRNA3-201ENST00000326828 MED19A0JLT2 244 aaPredicted RBP12.85□□□□□ -0.35
CHRNA3-201ENST00000326828 SMIM10L1P0DMW3 83 aa12.85□□□□□ -0.35
CHRNA3-201ENST00000326828 RCC1P18754 421 aaPredicted RBP12.85□□□□□ -0.35
CHRNA3-201ENST00000326828 RPS21P63220 83 aaKnown RBP12.85□□□□□ -0.35
CHRNA3-201ENST00000326828 DNM1P46Q6ZS02 220 aa12.85□□□□□ -0.35
CHRNA3-201ENST00000326828 MED25Q71SY5 747 aa12.85□□□□□ -0.35
CHRNA3-201ENST00000326828 OR2I1PQ8NGU4 316 aa12.85□□□□□ -0.35
CHRNA3-201ENST00000326828 RNF141Q8WVD5 230 aa12.85□□□□□ -0.35
CHRNA3-201ENST00000326828 SLC22A18Q96BI1 424 aa12.85□□□□□ -0.35
CHRNA3-201ENST00000326828 SMIM10Q96HG1 83 aa12.85□□□□□ -0.35
CHRNA3-201ENST00000326828 CLCC1Q96S66 551 aa12.85□□□□□ -0.35
CHRNA3-201ENST00000326828 RHOFQ9HBH0 211 aa12.85□□□□□ -0.35
CHRNA3-201ENST00000326828 FAM60AQ9NP50 221 aa12.85□□□□□ -0.35
CHRNA3-201ENST00000326828 RPS10P5Q9NQ39 176 aa12.85□□□□□ -0.35
CHRNA3-201ENST00000326828 HTR3BO95264 441 aa12.85□□□□□ -0.35
CHRNA3-201ENST00000326828 FAM109BQ6ICB4 259 aaPredicted RBP12.85□□□□□ -0.35
CHRNA3-201ENST00000326828 OR51F2Q8NH61 342 aa12.85□□□□□ -0.35
CHRNA3-201ENST00000326828 ASB5Q8WWX0 329 aa12.85□□□□□ -0.35
CHRNA3-201ENST00000326828 SPSB2Q99619 263 aa12.85□□□□□ -0.35
CHRNA3-201ENST00000326828 TDRD6O60522 2096 aaKnown RBP12.85□□□□□ -0.35
CHRNA3-201ENST00000326828 P2RY10O00398 339 aa12.84□□□□□ -0.35
CHRNA3-201ENST00000326828 MED6O75586 246 aa12.84□□□□□ -0.35
CHRNA3-201ENST00000326828 CPT2P23786 658 aa12.84□□□□□ -0.35
CHRNA3-201ENST00000326828 ZBTB25P24278 435 aa12.84□□□□□ -0.35
CHRNA3-201ENST00000326828 TFF2Q03403 129 aa12.84□□□□□ -0.35
CHRNA3-201ENST00000326828 EGR4Q05215 589 aa12.84□□□□□ -0.35
CHRNA3-201ENST00000326828 ZP2Q05996 745 aa12.84□□□□□ -0.35
CHRNA3-201ENST00000326828 SLC17A1Q14916 467 aa12.84□□□□□ -0.35
CHRNA3-201ENST00000326828 TOMM34Q15785 309 aaPredicted RBP12.84□□□□□ -0.35
CHRNA3-201ENST00000326828 VWA2Q5GFL6 755 aa12.84□□□□□ -0.35
CHRNA3-201ENST00000326828 CLEC9AQ6UXN8 241 aa12.84□□□□□ -0.35
CHRNA3-201ENST00000326828 COX15Q7KZN9 410 aa12.84□□□□□ -0.35
CHRNA3-201ENST00000326828 NAA40Q86UY6 237 aa12.84□□□□□ -0.35
CHRNA3-201ENST00000326828 ZSCAN4Q8NAM6 433 aaPredicted RBP12.84□□□□□ -0.35
CHRNA3-201ENST00000326828 RPS4Y2Q8TD47 263 aa12.84□□□□□ -0.35
CHRNA3-201ENST00000326828 TM4SF19Q96DZ7 209 aa12.84□□□□□ -0.35
CHRNA3-201ENST00000326828 AKR1E2Q96JD6 320 aa12.84□□□□□ -0.35
CHRNA3-201ENST00000326828 ADOQ96SZ5 270 aa12.84□□□□□ -0.35
CHRNA3-201ENST00000326828 ALX4Q9H161 411 aaPredicted RBP12.84□□□□□ -0.35
CHRNA3-201ENST00000326828 KCNK7Q9Y2U2 307 aa12.84□□□□□ -0.35
CHRNA3-201ENST00000326828 HEBP2Q9Y5Z4 205 aa12.84□□□□□ -0.35
CHRNA3-201ENST00000326828 RAB19A4D1S5 217 aa12.84□□□□□ -0.35
CHRNA3-201ENST00000326828 HCRTR2O43614 444 aa12.84□□□□□ -0.35
CHRNA3-201ENST00000326828 LRP3O75074 770 aa12.84□□□□□ -0.35
CHRNA3-201ENST00000326828 SFTPBP07988 381 aa12.84□□□□□ -0.35
CHRNA3-201ENST00000326828 SNRNP70P08621 437 aaKnown RBP12.84□□□□□ -0.35
CHRNA3-201ENST00000326828 SFTA3P0C7M3 94 aa12.84□□□□□ -0.35
CHRNA3-201ENST00000326828 CT45A8P0DMV1 189 aa12.84□□□□□ -0.35
CHRNA3-201ENST00000326828 CT45A9P0DMV2 189 aa12.84□□□□□ -0.35
CHRNA3-201ENST00000326828 ADH6P28332 368 aa12.84□□□□□ -0.35
CHRNA3-201ENST00000326828 CD1CP29017 333 aa12.84□□□□□ -0.35
CHRNA3-201ENST00000326828 GJA4P35212 333 aa12.84□□□□□ -0.35
CHRNA3-201ENST00000326828 OR2B8PP59922 312 aa12.84□□□□□ -0.35
CHRNA3-201ENST00000326828 ZNF345Q14585 488 aa12.84□□□□□ -0.35
CHRNA3-201ENST00000326828 CT45A2Q5DJT8 189 aa12.84□□□□□ -0.35
CHRNA3-201ENST00000326828 PRSS58Q8IYP2 241 aa12.84□□□□□ -0.35
CHRNA3-201ENST00000326828 FAM160A2Q8N612 972 aaPredicted RBP12.84□□□□□ -0.35
CHRNA3-201ENST00000326828 OTOSQ8NHW6 89 aa12.84□□□□□ -0.35
CHRNA3-201ENST00000326828 VSTM2LQ96N03 204 aa12.84□□□□□ -0.35
CHRNA3-201ENST00000326828 LAT2Q9GZY6 243 aa12.84□□□□□ -0.35
CHRNA3-201ENST00000326828 METTL8Q9H825 291 aaKnown RBP12.84□□□□□ -0.35
CHRNA3-201ENST00000326828 OR5AC2Q9NZP5 309 aa12.84□□□□□ -0.35
CHRNA3-201ENST00000326828 KLF15Q9UIH9 416 aa12.84□□□□□ -0.35
CHRNA3-201ENST00000326828 ZNF432O94892 652 aa12.84□□□□□ -0.35
CHRNA3-201ENST00000326828 FGF19O95750 216 aa12.84□□□□□ -0.35
CHRNA3-201ENST00000326828 HOXB5P09067 269 aa12.84□□□□□ -0.35
CHRNA3-201ENST00000326828 F2RL1P55085 397 aa12.84□□□□□ -0.35
CHRNA3-201ENST00000326828 POLR2GP62487 172 aaKnown RBP eCLIP12.84□□□□□ -0.35
CHRNA3-201ENST00000326828 RPS4XP62701 263 aaKnown RBP12.84□□□□□ -0.35
CHRNA3-201ENST00000326828 UQCC3Q6UW78 93 aa12.84□□□□□ -0.35
CHRNA3-201ENST00000326828 ADGRE4PQ86SQ3 457 aa12.84□□□□□ -0.35
CHRNA3-201ENST00000326828 LINC00469Q8N7U9 141 aa12.84□□□□□ -0.35
CHRNA3-201ENST00000326828 ZNF321PQ8N8H1 164 aa12.84□□□□□ -0.35
CHRNA3-201ENST00000326828 ZNF615Q8N8J6 731 aa12.84□□□□□ -0.35
CHRNA3-201ENST00000326828 MAFIPQ8WZ33 124 aa12.84□□□□□ -0.35
CHRNA3-201ENST00000326828 CTHRC1Q96CG8 243 aa12.84□□□□□ -0.35
CHRNA3-201ENST00000326828 DGAT2Q96PD7 388 aa12.84□□□□□ -0.35
CHRNA3-201ENST00000326828 CERS4Q9HA82 394 aa12.84□□□□□ -0.35
CHRNA3-201ENST00000326828 RP1P56715 2156 aa12.83□□□□□ -0.35
CHRNA3-201ENST00000326828 A0A1W2PPE3 182 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms