RNA–Protein interactions for RNA: ENST00000324288.12

CIITA-201, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CIITA, Length 11,952 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-201ENST00000324288 MMP7P09237 267 aaPredicted RBP7.25□□□□□ -1.25
CIITA-201ENST00000324288 ZNF25P17030 456 aaPredicted RBP7.25□□□□□ -1.25
CIITA-201ENST00000324288 OR13C8Q8NGS7 320 aa7.25□□□□□ -1.25
CIITA-201ENST00000324288 ASB11Q8WXH4 323 aa7.25□□□□□ -1.25
CIITA-201ENST00000324288 PINX1Q96BK5 328 aaKnown RBP7.25□□□□□ -1.25
CIITA-201ENST00000324288 HRASLS5Q96KN8 279 aa7.25□□□□□ -1.25
CIITA-201ENST00000324288 ACTR3CQ9C0K3 210 aaPredicted RBP7.25□□□□□ -1.25
CIITA-201ENST00000324288 LRP3O75074 770 aa7.25□□□□□ -1.25
CIITA-201ENST00000324288 PIAS2O75928 621 aa7.25□□□□□ -1.25
CIITA-201ENST00000324288 ASAH1Q13510 395 aa7.25□□□□□ -1.25
CIITA-201ENST00000324288 OR5I1Q13606 314 aa7.25□□□□□ -1.25
CIITA-201ENST00000324288 SIGIRRQ6IA17 410 aa7.25□□□□□ -1.25
CIITA-201ENST00000324288 C19orf35Q6ZS72 473 aa7.25□□□□□ -1.25
CIITA-201ENST00000324288 FAM71CQ8NEG0 241 aa7.25□□□□□ -1.25
CIITA-201ENST00000324288 TSSK2Q96PF2 358 aa7.25□□□□□ -1.25
CIITA-201ENST00000324288 GPRIN2O60269 458 aa7.25□□□□□ -1.25
CIITA-201ENST00000324288 DMWDQ09019 674 aa7.25□□□□□ -1.25
CIITA-201ENST00000324288 KIR2DS3Q14952 304 aa7.25□□□□□ -1.25
CIITA-201ENST00000324288 ZNF534Q76KX8 674 aa7.25□□□□□ -1.25
CIITA-201ENST00000324288 OR5AP2Q8NGF4 316 aa7.25□□□□□ -1.25
CIITA-201ENST00000324288 LMF2Q9BU23 707 aaKnown RBP7.25□□□□□ -1.25
CIITA-201ENST00000324288 ZNF385DQ9H6B1 395 aa7.25□□□□□ -1.25
CIITA-201ENST00000324288 FZD9O00144 591 aa7.25□□□□□ -1.25
CIITA-201ENST00000324288 TCF21O43680 179 aa7.25□□□□□ -1.25
CIITA-201ENST00000324288 CER1O95813 267 aa7.25□□□□□ -1.25
CIITA-201ENST00000324288 TTRP02766 147 aa7.25□□□□□ -1.25
CIITA-201ENST00000324288 DEFB103AP81534 67 aa7.25□□□□□ -1.25
CIITA-201ENST00000324288 PMP22Q01453 160 aa7.25□□□□□ -1.25
CIITA-201ENST00000324288 ZNF266Q14584 549 aa7.25□□□□□ -1.25
CIITA-201ENST00000324288 ADGRE4PQ86SQ3 457 aa7.25□□□□□ -1.25
CIITA-201ENST00000324288 LHX4Q969G2 390 aa7.25□□□□□ -1.25
CIITA-201ENST00000324288 MFRPQ9BY79 579 aa7.25□□□□□ -1.25
CIITA-201ENST00000324288 GSX2Q9BZM3 304 aa7.25□□□□□ -1.25
CIITA-201ENST00000324288 HTR1FP30939 366 aa7.25□□□□□ -1.25
CIITA-201ENST00000324288 KCNJ10P78508 379 aa7.25□□□□□ -1.25
CIITA-201ENST00000324288 FGF13Q92913 245 aa7.25□□□□□ -1.25
CIITA-201ENST00000324288 TCTN2Q96GX1 697 aa7.25□□□□□ -1.25
CIITA-201ENST00000324288 MBOAT4Q96T53 435 aa7.25□□□□□ -1.25
CIITA-201ENST00000324288 DHRS9Q9BPW9 319 aa7.25□□□□□ -1.25
CIITA-201ENST00000324288 LANCL2Q9NS86 450 aa7.25□□□□□ -1.25
CIITA-201ENST00000324288 OBP2AQ9NY56 170 aa7.25□□□□□ -1.25
CIITA-201ENST00000324288 DIMT1Q9UNQ2 313 aaKnown RBP7.25□□□□□ -1.25
CIITA-201ENST00000324288 MN1Q10571 1320 aaPredicted RBP7.25□□□□□ -1.25
CIITA-201ENST00000324288 CSF3P09919 207 aa7.25□□□□□ -1.25
CIITA-201ENST00000324288 ADRA2CP18825 462 aa7.25□□□□□ -1.25
CIITA-201ENST00000324288 CDK5Q00535 292 aa7.25□□□□□ -1.25
CIITA-201ENST00000324288 SCD5Q86SK9 330 aa7.25□□□□□ -1.25
CIITA-201ENST00000324288 ZNF480Q8WV37 535 aa7.25□□□□□ -1.25
CIITA-201ENST00000324288 A0A1B0GWA3 101 aa7.25□□□□□ -1.25
CIITA-201ENST00000324288 TRDV1A0A1B0GX56 115 aa7.25□□□□□ -1.25
CIITA-201ENST00000324288 PAPLNO95428 1278 aa7.25□□□□□ -1.25
CIITA-201ENST00000324288 TIMP1P01033 207 aa7.25□□□□□ -1.25
CIITA-201ENST00000324288 TCTAP57738 103 aa7.25□□□□□ -1.25
CIITA-201ENST00000324288 CORO6Q6QEF8 472 aa7.25□□□□□ -1.25
CIITA-201ENST00000324288 TRILQ7L0X0 811 aa7.25□□□□□ -1.25
CIITA-201ENST00000324288 BTLAQ7Z6A9 289 aa7.25□□□□□ -1.25
CIITA-201ENST00000324288 ZC3H3Q8IXZ2 948 aaKnown RBP7.25□□□□□ -1.25
CIITA-201ENST00000324288 OR14A16Q8NHC5 309 aa7.25□□□□□ -1.25
CIITA-201ENST00000324288 ZNF264O43296 627 aa7.25□□□□□ -1.25
CIITA-201ENST00000324288 GPR32P1Q8NGA4 272 aa7.25□□□□□ -1.25
CIITA-201ENST00000324288 SOX7Q9BT81 388 aa7.25□□□□□ -1.25
CIITA-201ENST00000324288 NDRG3Q9UGV2 375 aa7.25□□□□□ -1.25
CIITA-201ENST00000324288 UBE2L5PA0A1B0GUS4 154 aa7.25□□□□□ -1.25
CIITA-201ENST00000324288 RNASEK-C17orf49H0YIS7 233 aa7.25□□□□□ -1.25
CIITA-201ENST00000324288 CRXO43186 299 aaPredicted RBP7.25□□□□□ -1.25
CIITA-201ENST00000324288 ZNF93P35789 620 aaPredicted RBP7.25□□□□□ -1.25
CIITA-201ENST00000324288 CRMP1Q14194 572 aa7.25□□□□□ -1.25
CIITA-201ENST00000324288 OXA1LQ15070 435 aa7.25□□□□□ -1.25
CIITA-201ENST00000324288 SYT6Q5T7P8 510 aaPredicted RBP7.25□□□□□ -1.25
CIITA-201ENST00000324288 ETV3LQ6ZN32 361 aa7.25□□□□□ -1.25
CIITA-201ENST00000324288 ZNF687Q8N1G0 1237 aa7.25□□□□□ -1.25
CIITA-201ENST00000324288 FAM174AQ8TBP5 190 aa7.25□□□□□ -1.25
CIITA-201ENST00000324288 IL22RA2Q969J5 263 aa7.25□□□□□ -1.25
CIITA-201ENST00000324288 ATP13A2Q9NQ11 1180 aa7.25□□□□□ -1.25
CIITA-201ENST00000324288 SSUH2Q9Y2M2 353 aa7.25□□□□□ -1.25
CIITA-201ENST00000324288 USF3Q68DE3 2245 aa7.25□□□□□ -1.25
CIITA-201ENST00000324288 ELAVL4P26378 380 aaKnown RBP7.25□□□□□ -1.25
CIITA-201ENST00000324288 TPPP2P59282 170 aa7.25□□□□□ -1.25
CIITA-201ENST00000324288 RBM45Q8IUH3 476 aaKnown RBP7.25□□□□□ -1.25
CIITA-201ENST00000324288 ZNF561Q8N587 486 aa7.25□□□□□ -1.25
CIITA-201ENST00000324288 SIRT6Q8N6T7 355 aa7.25□□□□□ -1.25
CIITA-201ENST00000324288 OR10G3Q8NGC4 313 aa7.25□□□□□ -1.25
CIITA-201ENST00000324288 OR10X1Q8NGY0 326 aa7.25□□□□□ -1.25
CIITA-201ENST00000324288 SIGLEC6O43699 453 aa7.24□□□□□ -1.25
CIITA-201ENST00000324288 B3GALT4O96024 378 aa7.24□□□□□ -1.25
CIITA-201ENST00000324288 ZNF26P17031 533 aaPredicted RBP7.24□□□□□ -1.25
CIITA-201ENST00000324288 ASB13Q8WXK3 278 aa7.24□□□□□ -1.25
CIITA-201ENST00000324288 MED18Q9BUE0 208 aa7.24□□□□□ -1.25
CIITA-201ENST00000324288 OR52A1Q9UKL2 312 aa7.24□□□□□ -1.25
CIITA-201ENST00000324288 COL2A1P02458 1487 aaPredicted RBP7.24□□□□□ -1.25
CIITA-201ENST00000324288 XKRY2A2RUG3 117 aa7.24□□□□□ -1.25
CIITA-201ENST00000324288 DEGS1O15121 323 aa7.24□□□□□ -1.25
CIITA-201ENST00000324288 EDN1P05305 212 aa7.24□□□□□ -1.25
CIITA-201ENST00000324288 FPR3P25089 353 aa7.24□□□□□ -1.25
CIITA-201ENST00000324288 RGRP47804 291 aa7.24□□□□□ -1.25
CIITA-201ENST00000324288 CATR1Q13166 79 aa7.24□□□□□ -1.25
CIITA-201ENST00000324288 VEZF1Q14119 521 aa7.24□□□□□ -1.25
CIITA-201ENST00000324288 ARFGAP1Q8N6T3 406 aa7.24□□□□□ -1.25
CIITA-201ENST00000324288 UCK1Q9HA47 277 aa7.24□□□□□ -1.25
CIITA-201ENST00000324288 ETV7Q9Y603 341 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms