RNA–Protein interactions for RNA: ENST00000323926.10

FN1-201, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 8,708 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-201ENST00000323926 NUMBLQ9Y6R0 609 aa11.56□□□□□ -0.56
FN1-201ENST00000323926 BHLHE40O14503 412 aa11.56□□□□□ -0.56
FN1-201ENST00000323926 SMAGPQ0VAQ4 97 aa11.56□□□□□ -0.56
FN1-201ENST00000323926 ZNF542PQ5EBM4 170 aa11.56□□□□□ -0.56
FN1-201ENST00000323926 ANKRD16Q6P6B7 361 aa11.56□□□□□ -0.56
FN1-201ENST00000323926 SLC35D2Q76EJ3 337 aa11.56□□□□□ -0.56
FN1-201ENST00000323926 RPS19BP1Q86WX3 136 aaKnown RBP11.56□□□□□ -0.56
FN1-201ENST00000323926 SLC7A6Q92536 515 aa11.56□□□□□ -0.56
FN1-201ENST00000323926 OXGR1Q96P68 337 aa11.56□□□□□ -0.56
FN1-201ENST00000323926 TPSD1Q9BZJ3 242 aa11.56□□□□□ -0.56
FN1-201ENST00000323926 TPOP07202 933 aa11.55□□□□□ -0.56
FN1-201ENST00000323926 SLURP2P0DP57 97 aa11.55□□□□□ -0.56
FN1-201ENST00000323926 PTNP21246 168 aa11.55□□□□□ -0.56
FN1-201ENST00000323926 CSNK1G2P78368 415 aa11.55□□□□□ -0.56
FN1-201ENST00000323926 LRRC15Q8TF66 581 aa11.55□□□□□ -0.56
FN1-201ENST00000323926 SCARB1Q8WTV0 552 aa11.55□□□□□ -0.56
FN1-201ENST00000323926 PDXPQ96GD0 296 aa11.55□□□□□ -0.56
FN1-201ENST00000323926 CXorf58Q96LI9 332 aa11.55□□□□□ -0.56
FN1-201ENST00000323926 CHST8Q9H2A9 424 aa11.55□□□□□ -0.56
FN1-201ENST00000323926 FUT4P22083 530 aa11.55□□□□□ -0.56
FN1-201ENST00000323926 PPICP45877 212 aa11.55□□□□□ -0.56
FN1-201ENST00000323926 CMC2Q9NRP2 79 aa11.55□□□□□ -0.56
FN1-201ENST00000323926 HCFC1R1Q9NWW0 138 aa11.55□□□□□ -0.56
FN1-201ENST00000323926 ALDOCP09972 364 aaKnown RBP11.55□□□□□ -0.56
FN1-201ENST00000323926 KLHDC1Q8N7A1 406 aa11.55□□□□□ -0.56
FN1-201ENST00000323926 LILRB4Q8NHJ6 448 aa11.55□□□□□ -0.56
FN1-201ENST00000323926 ARRDC2Q8TBH0 407 aa11.55□□□□□ -0.56
FN1-201ENST00000323926 SLC5A6Q9Y289 635 aa11.55□□□□□ -0.56
FN1-201ENST00000323926 CLEC3BP05452 202 aa11.55□□□□□ -0.56
FN1-201ENST00000323926 HOXC4P09017 264 aaPredicted RBP11.55□□□□□ -0.56
FN1-201ENST00000323926 MAP4K2Q12851 820 aa11.55□□□□□ -0.56
FN1-201ENST00000323926 PHYHD1Q5SRE7 291 aa11.55□□□□□ -0.56
FN1-201ENST00000323926 CDH26Q8IXH8 852 aa11.55□□□□□ -0.56
FN1-201ENST00000323926 PRR22Q8IZ63 422 aa11.55□□□□□ -0.56
FN1-201ENST00000323926 TTC9BQ8N6N2 239 aa11.55□□□□□ -0.56
FN1-201ENST00000323926 GAR1Q9NY12 217 aaKnown RBP11.55□□□□□ -0.56
FN1-201ENST00000323926 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.55□□□□□ -0.562e-24■■■■□ 22.7
FN1-201ENST00000323926 SLC38A9Q8NBW4 561 aa11.55□□□□□ -0.56
FN1-201ENST00000323926 TM4SF18Q96CE8 201 aa11.55□□□□□ -0.56
FN1-201ENST00000323926 FAM117AQ9C073 453 aa11.55□□□□□ -0.56
FN1-201ENST00000323926 ACKR4Q9NPB9 350 aa11.55□□□□□ -0.56
FN1-201ENST00000323926 MRPL15Q9P015 296 aaKnown RBP11.55□□□□□ -0.56
FN1-201ENST00000323926 CACNA1GO43497 2377 aa11.55□□□□□ -0.56
FN1-201ENST00000323926 LIM2P55344 173 aa11.55□□□□□ -0.56
FN1-201ENST00000323926 C12orf76Q8N812 135 aaPredicted RBP11.55□□□□□ -0.56
FN1-201ENST00000323926 TXNIPQ9H3M7 391 aa11.55□□□□□ -0.56
FN1-201ENST00000323926 GALNT9Q9HCQ5 603 aa11.55□□□□□ -0.56
FN1-201ENST00000323926 FRG2CA6NGY1 282 aa11.55□□□□□ -0.56
FN1-201ENST00000323926 TO15178 435 aa11.55□□□□□ -0.56
FN1-201ENST00000323926 F11P03951 625 aa11.55□□□□□ -0.56
FN1-201ENST00000323926 ZNF813Q6ZN06 617 aa11.55□□□□□ -0.56
FN1-201ENST00000323926 ARIH2OSQ8N7S6 290 aa11.55□□□□□ -0.56
FN1-201ENST00000323926 ZNF251Q9BRH9 671 aa11.55□□□□□ -0.56
FN1-201ENST00000323926 TBXA2RP21731 343 aa11.54□□□□□ -0.56
FN1-201ENST00000323926 GABRA4P48169 554 aa11.54□□□□□ -0.56
FN1-201ENST00000323926 SRP9P49458 86 aaKnown RBP11.54□□□□□ -0.56
FN1-201ENST00000323926 CLDN15P56746 228 aa11.54□□□□□ -0.56
FN1-201ENST00000323926 TLE1Q04724 770 aa11.54□□□□□ -0.56
FN1-201ENST00000323926 XKR7Q5GH72 579 aa11.54□□□□□ -0.56
FN1-201ENST00000323926 MRPS24Q96EL2 167 aaKnown RBP11.54□□□□□ -0.56
FN1-201ENST00000323926 DUS3LQ96G46 650 aaKnown RBP11.54□□□□□ -0.56
FN1-201ENST00000323926 SLC25A19Q9HC21 320 aa11.54□□□□□ -0.56
FN1-201ENST00000323926 FREM1Q5H8C1 2179 aa11.54□□□□□ -0.56
FN1-201ENST00000323926 A0A0U1RQK1 487 aa11.54□□□□□ -0.56
FN1-201ENST00000323926 SEC14L6B5MCN3 397 aa11.54□□□□□ -0.56
FN1-201ENST00000323926 PIGFQ07326 219 aa11.54□□□□□ -0.56
FN1-201ENST00000323926 ZNF718Q3SXZ3 478 aa11.54□□□□□ -0.56
FN1-201ENST00000323926 P2RY12Q9H244 342 aa11.54□□□□□ -0.56
FN1-201ENST00000323926 MYADML2A6NDP7 307 aa11.54□□□□□ -0.56
FN1-201ENST00000323926 GFYI3L273 518 aa11.54□□□□□ -0.56
FN1-201ENST00000323926 ENSAO43768 121 aaKnown RBP11.54□□□□□ -0.56
FN1-201ENST00000323926 CTSCP53634 463 aa11.54□□□□□ -0.56
FN1-201ENST00000323926 FAM189BP81408 668 aa11.54□□□□□ -0.56
FN1-201ENST00000323926 CPEB2Q7Z5Q1 589 aaKnown RBP11.54□□□□□ -0.56
FN1-201ENST00000323926 FOXJ3Q9UPW0 622 aa11.54□□□□□ -0.56
FN1-201ENST00000323926 LRRC37AA6NMS7 1700 aa11.54□□□□□ -0.56
FN1-201ENST00000323926 H2AFB1P0C5Y9 115 aa11.54□□□□□ -0.56
FN1-201ENST00000323926 TNFRSF1BP20333 461 aa11.54□□□□□ -0.56
FN1-201ENST00000323926 SLC6A11P48066 632 aa11.54□□□□□ -0.56
FN1-201ENST00000323926 HCCSP53701 268 aa11.54□□□□□ -0.56
FN1-201ENST00000323926 PFN3P60673 137 aa11.54□□□□□ -0.56
FN1-201ENST00000323926 ZNF836Q6ZNA1 936 aa11.54□□□□□ -0.56
FN1-201ENST00000323926 GALMQ96C23 342 aa11.54□□□□□ -0.56
FN1-201ENST00000323926 OCIAD1Q9NX40 245 aa11.54□□□□□ -0.56
FN1-201ENST00000323926 THYN1Q9P016 225 aa11.54□□□□□ -0.56
FN1-201ENST00000323926 AMMECR1Q9Y4X0 333 aaPredicted RBP11.54□□□□□ -0.56
FN1-201ENST00000323926 DENND4AQ7Z401 1863 aa11.54□□□□□ -0.56
FN1-201ENST00000323926 CNMDO75829 334 aa11.54□□□□□ -0.56
FN1-201ENST00000323926 OR10K1Q8NGX5 313 aa11.54□□□□□ -0.56
FN1-201ENST00000323926 TMEM9BQ9NQ34 198 aa11.54□□□□□ -0.56
FN1-201ENST00000323926 CEP192Q8TEP8 1941 aa11.54□□□□□ -0.56
FN1-201ENST00000323926 RNF165Q6ZSG1 346 aa11.54□□□□□ -0.56
FN1-201ENST00000323926 UTP4Q969X6 686 aaKnown RBP11.54□□□□□ -0.56
FN1-201ENST00000323926 C10orf35Q96D05 121 aa11.54□□□□□ -0.56
FN1-201ENST00000323926 ZNF586Q9NXT0 402 aa11.54□□□□□ -0.56
FN1-201ENST00000323926 TERTO14746 1132 aaKnown RBP11.54□□□□□ -0.56
FN1-201ENST00000323926 TCRBP04435 133 aa11.54□□□□□ -0.56
FN1-201ENST00000323926 ANKRD34CP0C6C1 535 aa11.54□□□□□ -0.56
FN1-201ENST00000323926 MRPL19P49406 292 aaKnown RBP11.54□□□□□ -0.56
FN1-201ENST00000323926 ADGRF3Q8IZF5 1079 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms