RNA–Protein interactions for RNA: ENST00000321895.6

CCDC71-201, Transcript of coiled-coil domain containing 71, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC71, Length 1,781 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71-201ENST00000321895 PNRC2Q9NPJ4 139 aaKnown RBP17.28■□□□□ 0.36
CCDC71-201ENST00000321895 CENPMQ9NSP4 180 aa17.28■□□□□ 0.36
CCDC71-201ENST00000321895 RPP14O95059 124 aaKnown RBP17.27■□□□□ 0.35
CCDC71-201ENST00000321895 IL18BPO95998 194 aa17.27■□□□□ 0.35
CCDC71-201ENST00000321895 CD8BP10966 210 aa17.27■□□□□ 0.35
CCDC71-201ENST00000321895 GADD45AP24522 165 aa17.27■□□□□ 0.35
CCDC71-201ENST00000321895 CTSSP25774 331 aa17.27■□□□□ 0.35
CCDC71-201ENST00000321895 PSMA1P25786 263 aaKnown RBP17.27■□□□□ 0.35
CCDC71-201ENST00000321895 GABRA5P31644 462 aa17.27■□□□□ 0.35
CCDC71-201ENST00000321895 SCRN3Q0VDG4 424 aa17.27■□□□□ 0.35
CCDC71-201ENST00000321895 NFATC3Q12968 1075 aa17.27■□□□□ 0.35
CCDC71-201ENST00000321895 HIST2H2ABQ8IUE6 130 aaPredicted RBP17.27■□□□□ 0.35
CCDC71-201ENST00000321895 SKA3Q8IX90 412 aa17.27■□□□□ 0.35
CCDC71-201ENST00000321895 RPS4Y2Q8TD47 263 aa17.27■□□□□ 0.35
CCDC71-201ENST00000321895 SMIM19Q96E16 107 aa17.27■□□□□ 0.35
CCDC71-201ENST00000321895 NIPAL2Q9H841 368 aa17.27■□□□□ 0.35
CCDC71-201ENST00000321895 DDX28Q9NUL7 540 aaKnown RBP17.27■□□□□ 0.35
CCDC71-201ENST00000321895 CD1AP06126 327 aa17.26■□□□□ 0.35
CCDC71-201ENST00000321895 DCTDP32321 178 aa17.26■□□□□ 0.35
CCDC71-201ENST00000321895 CASP6P55212 293 aa17.26■□□□□ 0.35
CCDC71-201ENST00000321895 TGFBR3Q03167 851 aa17.26■□□□□ 0.35
CCDC71-201ENST00000321895 FDX2Q6P4F2 183 aa17.26■□□□□ 0.35
CCDC71-201ENST00000321895 ANKRD16Q6P6B7 361 aa17.26■□□□□ 0.35
CCDC71-201ENST00000321895 ARL9Q6T311 187 aa17.26■□□□□ 0.35
CCDC71-201ENST00000321895 OR1K1Q8NGR3 316 aa17.26■□□□□ 0.35
CCDC71-201ENST00000321895 SF3B6Q9Y3B4 125 aaKnown RBP17.26■□□□□ 0.35
CCDC71-201ENST00000321895 AIREO43918 545 aa17.25■□□□□ 0.35
CCDC71-201ENST00000321895 PMPCAQ10713 525 aa17.25■□□□□ 0.35
CCDC71-201ENST00000321895 CTF1Q16619 201 aa17.25■□□□□ 0.35
CCDC71-201ENST00000321895 STUB1Q9UNE7 303 aa17.25■□□□□ 0.35
CCDC71-201ENST00000321895 TIMM10BQ9Y5J6 103 aa17.25■□□□□ 0.35
CCDC71-201ENST00000321895 TRBV2A0A0J9YWF9 115 aa17.25■□□□□ 0.35
CCDC71-201ENST00000321895 E9PLN8 166 aa17.25■□□□□ 0.35
CCDC71-201ENST00000321895 ZNF32P17041 273 aa17.25■□□□□ 0.35
CCDC71-201ENST00000321895 COX5AP20674 150 aa17.25■□□□□ 0.35
CCDC71-201ENST00000321895 IGHV1-2P23083 117 aa17.25■□□□□ 0.35
CCDC71-201ENST00000321895 GDI2P50395 445 aaKnown RBP17.25■□□□□ 0.35
CCDC71-201ENST00000321895 RPS25P62851 125 aaKnown RBP17.25■□□□□ 0.35
CCDC71-201ENST00000321895 GRB2P62993 217 aaKnown RBP17.25■□□□□ 0.35
CCDC71-201ENST00000321895 ALKBH1Q13686 389 aaKnown RBP17.25■□□□□ 0.35
CCDC71-201ENST00000321895 RAB35Q15286 201 aa17.25■□□□□ 0.35
CCDC71-201ENST00000321895 TAF13Q15543 124 aa17.25■□□□□ 0.35
CCDC71-201ENST00000321895 SLC36A2Q495M3 483 aa17.25■□□□□ 0.35
CCDC71-201ENST00000321895 CCDC92Q53HC0 331 aaPredicted RBP17.25■□□□□ 0.35
CCDC71-201ENST00000321895 ELFN2Q5R3F8 820 aa17.25■□□□□ 0.35
CCDC71-201ENST00000321895 ZNF544Q6NX49 715 aa17.25■□□□□ 0.35
CCDC71-201ENST00000321895 GABRG1Q8N1C3 465 aa17.25■□□□□ 0.35
CCDC71-201ENST00000321895 HSD17B8Q92506 261 aa17.25■□□□□ 0.35
CCDC71-201ENST00000321895 C12orf43Q96C57 262 aaKnown RBP17.25■□□□□ 0.35
CCDC71-201ENST00000321895 PGLYRP3Q96LB9 341 aa17.25■□□□□ 0.35
CCDC71-201ENST00000321895 ATF6BQ99941 703 aa17.25■□□□□ 0.35
CCDC71-201ENST00000321895 VKORC1Q9BQB6 163 aa17.25■□□□□ 0.35
CCDC71-201ENST00000321895 HDHD2Q9H0R4 259 aa17.25■□□□□ 0.35
CCDC71-201ENST00000321895 OR51E2Q9H255 320 aa17.25■□□□□ 0.35
CCDC71-201ENST00000321895 PLEK2Q9NYT0 353 aa17.25■□□□□ 0.35
CCDC71-201ENST00000321895 SH3BGRL2Q9UJC5 107 aa17.25■□□□□ 0.35
CCDC71-201ENST00000321895 POLEQ07864 2286 aa17.24■□□□□ 0.35
CCDC71-201ENST00000321895 A0A096LPE4 126 aa17.24■□□□□ 0.35
CCDC71-201ENST00000321895 A0A1W2PPZ6 126 aa17.24■□□□□ 0.35
CCDC71-201ENST00000321895 H3BMQ9 156 aa17.24■□□□□ 0.35
CCDC71-201ENST00000321895 SGCEO43556 437 aa17.24■□□□□ 0.35
CCDC71-201ENST00000321895 MMP7P09237 267 aaPredicted RBP17.24■□□□□ 0.35
CCDC71-201ENST00000321895 OPRM1P35372 400 aa17.24■□□□□ 0.35
CCDC71-201ENST00000321895 NANOS3P60323 173 aaKnown RBP17.24■□□□□ 0.35
CCDC71-201ENST00000321895 SLC3A1Q07837 685 aa17.24■□□□□ 0.35
CCDC71-201ENST00000321895 TRAM1Q15629 374 aa17.24■□□□□ 0.35
CCDC71-201ENST00000321895 ZNF829Q3KNS6 432 aaPredicted RBP17.24■□□□□ 0.35
CCDC71-201ENST00000321895 GDPGP1Q6ZNW5 385 aa17.24■□□□□ 0.35
CCDC71-201ENST00000321895 BEND4Q6ZU67 534 aa17.24■□□□□ 0.35
CCDC71-201ENST00000321895 DPPA2Q7Z7J5 298 aa17.24■□□□□ 0.35
CCDC71-201ENST00000321895 ZNF610Q8N9Z0 462 aa17.24■□□□□ 0.35
CCDC71-201ENST00000321895 OR2G2Q8NGZ5 317 aa17.24■□□□□ 0.35
CCDC71-201ENST00000321895 BCL2L2Q92843 193 aaPredicted RBP17.24■□□□□ 0.35
CCDC71-201ENST00000321895 RPL3LQ92901 407 aaKnown RBP17.24■□□□□ 0.35
CCDC71-201ENST00000321895 OPN3Q9H1Y3 402 aaPredicted RBP17.24■□□□□ 0.35
CCDC71-201ENST00000321895 ZNF224Q9NZL3 707 aa17.24■□□□□ 0.35
CCDC71-201ENST00000321895 FBXL3Q9UKT7 428 aa17.24■□□□□ 0.35
CCDC71-201ENST00000321895 SLC5A6Q9Y289 635 aa17.24■□□□□ 0.35
CCDC71-201ENST00000321895 R4GMQ9 66 aa17.24■□□□□ 0.35
CCDC71-201ENST00000321895 GPRIN2O60269 458 aa17.23■□□□□ 0.35
CCDC71-201ENST00000321895 SRSF10O75494 262 aaKnown RBP17.23■□□□□ 0.35
CCDC71-201ENST00000321895 HLA-DPB1P04440 258 aa17.23■□□□□ 0.35
CCDC71-201ENST00000321895 NR4A1P22736 598 aa17.23■□□□□ 0.35
CCDC71-201ENST00000321895 HSD11B1P28845 292 aa17.23■□□□□ 0.35
CCDC71-201ENST00000321895 CRYBB2P43320 205 aa17.23■□□□□ 0.35
CCDC71-201ENST00000321895 CCR9P51686 369 aa17.23■□□□□ 0.35
CCDC71-201ENST00000321895 ECH1Q13011 328 aa17.23■□□□□ 0.35
CCDC71-201ENST00000321895 TMEM211Q6ICI0 200 aa17.23■□□□□ 0.35
CCDC71-201ENST00000321895 CD200R1LQ6Q8B3 271 aa17.23■□□□□ 0.35
CCDC71-201ENST00000321895 ZNF433Q8N7K0 673 aaPredicted RBP17.23■□□□□ 0.35
CCDC71-201ENST00000321895 GHSRQ92847 366 aa17.23■□□□□ 0.35
CCDC71-201ENST00000321895 TMEM203Q969S6 136 aa17.23■□□□□ 0.35
CCDC71-201ENST00000321895 C4orf45Q96LM5 186 aa17.23■□□□□ 0.35
CCDC71-201ENST00000321895 COQ7Q99807 217 aa17.23■□□□□ 0.35
CCDC71-201ENST00000321895 CHCHD6Q9BRQ6 235 aa17.23■□□□□ 0.35
CCDC71-201ENST00000321895 TMED9Q9BVK6 235 aa17.23■□□□□ 0.35
CCDC71-201ENST00000321895 OR2H1Q9GZK4 316 aa17.23■□□□□ 0.35
CCDC71-201ENST00000321895 FRRS1LQ9P0K9 344 aa17.23■□□□□ 0.35
CCDC71-201ENST00000321895 CACNA1BQ00975 2339 aa17.23■□□□□ 0.35
CCDC71-201ENST00000321895 A0A0G2JNJ9 132 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms